RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 NPC1L1Q9UHC9 1359 aa32.74■■■□□ 2.83
CHKA-202ENST00000356135 NRKQ7Z2Y5 1582 aa32.71■■■□□ 2.83
CHKA-202ENST00000356135 PAK3O75914 559 aaPredicted RBP32.71■■■□□ 2.83
CHKA-202ENST00000356135 PARD3Q8TEW0 1356 aa32.71■■■□□ 2.83
CHKA-202ENST00000356135 KIF1AQ12756 1690 aa32.71■■■□□ 2.83
CHKA-202ENST00000356135 KRT28Q7Z3Y7 464 aa32.7■■■□□ 2.83
CHKA-202ENST00000356135 RALBP1Q15311 655 aa32.7■■■□□ 2.82
CHKA-202ENST00000356135 CERKQ8TCT0 537 aa32.68■■■□□ 2.82
CHKA-202ENST00000356135 MORC1Q86VD1 984 aa32.68■■■□□ 2.82
CHKA-202ENST00000356135 TNNT2P45379 298 aaPredicted RBP32.67■■■□□ 2.82
CHKA-202ENST00000356135 NSD2O96028 1365 aa32.64■■■□□ 2.82
CHKA-202ENST00000356135 NUTM2GQ5VZR2 741 aa32.64■■■□□ 2.82
CHKA-202ENST00000356135 KIF20BQ96Q89 1820 aa32.64■■■□□ 2.82
CHKA-202ENST00000356135 TTC21AQ8NDW8 1320 aa32.64■■■□□ 2.82
CHKA-202ENST00000356135 NPHP3Q7Z494 1330 aa32.63■■■□□ 2.81
CHKA-202ENST00000356135 TOM1O60784 492 aa32.63■■■□□ 2.81
CHKA-202ENST00000356135 CCDC184Q52MB2 194 aa32.62■■■□□ 2.81
CHKA-202ENST00000356135 ABTB2Q8N961 1025 aa32.62■■■□□ 2.81
CHKA-202ENST00000356135 UBAP1LF5GYI3 381 aa32.61■■■□□ 2.81
CHKA-202ENST00000356135 PIP4K2BP78356 416 aa32.6■■■□□ 2.81
CHKA-202ENST00000356135 MYBBP1AQ9BQG0 1328 aaKnown RBP32.6■■■□□ 2.81
CHKA-202ENST00000356135 FBLN1P23142 703 aa32.59■■■□□ 2.81
CHKA-202ENST00000356135 PPP2R1AP30153 589 aa32.59■■■□□ 2.81
CHKA-202ENST00000356135 COG3Q96JB2 828 aa32.59■■■□□ 2.81
CHKA-202ENST00000356135 BRD4O60885 1362 aaPredicted RBP32.58■■■□□ 2.81
CHKA-202ENST00000356135 NLRP6P59044 892 aa32.58■■■□□ 2.81
CHKA-202ENST00000356135 LMOD2Q6P5Q4 547 aa32.58■■■□□ 2.81
CHKA-202ENST00000356135 PIK3C2AO00443 1686 aa32.57■■■□□ 2.8
CHKA-202ENST00000356135 PXDNQ92626 1479 aa32.57■■■□□ 2.8
CHKA-202ENST00000356135 ROBO1Q9Y6N7 1651 aa32.57■■■□□ 2.8
CHKA-202ENST00000356135 TRPM3Q9HCF6 1732 aaPredicted RBP32.56■■■□□ 2.8
CHKA-202ENST00000356135 IQSEC2Q5JU85 1478 aa32.55■■■□□ 2.8
CHKA-202ENST00000356135 ANKRD26Q9UPS8 1709 aa32.55■■■□□ 2.8
CHKA-202ENST00000356135 SCAF1Q9H7N4 1312 aaKnown RBP32.54■■■□□ 2.8
CHKA-202ENST00000356135 CCER2I3L3R5 266 aa32.54■■■□□ 2.8
CHKA-202ENST00000356135 PLEKHG5O94827 1062 aa32.54■■■□□ 2.8
CHKA-202ENST00000356135 SOS2Q07890 1332 aaPredicted RBP32.53■■■□□ 2.8
CHKA-202ENST00000356135 OVOS2A0A0J9YW53 1432 aa32.53■■■□□ 2.8
CHKA-202ENST00000356135 OVOS2Q6IE36 1432 aa32.53■■■□□ 2.8
CHKA-202ENST00000356135 USP31Q70CQ4 1352 aa32.52■■■□□ 2.8
CHKA-202ENST00000356135 SOX12O15370 315 aa32.51■■■□□ 2.79
CHKA-202ENST00000356135 SBNO1A3KN83 1393 aa32.5■■■□□ 2.79
CHKA-202ENST00000356135 NLRP13Q86W25 1043 aa32.49■■■□□ 2.79
CHKA-202ENST00000356135 NHSL1Q5SYE7 1610 aa32.49■■■□□ 2.79
CHKA-202ENST00000356135 SPATA31A3Q5VYP0 1347 aa32.48■■■□□ 2.79
CHKA-202ENST00000356135 MRS2Q9HD23 443 aa32.47■■■□□ 2.79
CHKA-202ENST00000356135 TNS3Q68CZ2 1445 aa32.46■■■□□ 2.79
CHKA-202ENST00000356135 MARF1Q9Y4F3 1742 aaKnown RBP32.45■■■□□ 2.79
CHKA-202ENST00000356135 MTHFSP49914 203 aa32.45■■■□□ 2.78
CHKA-202ENST00000356135 ALS2Q96Q42 1657 aa32.45■■■□□ 2.78
CHKA-202ENST00000356135 RRS1Q15050 365 aaKnown RBP32.43■■■□□ 2.78
CHKA-202ENST00000356135 POLKQ9UBT6 870 aa32.42■■■□□ 2.78
CHKA-202ENST00000356135 EMILIN1Q9Y6C2 1016 aa32.4■■■□□ 2.78
CHKA-202ENST00000356135 AHDC1Q5TGY3 1603 aaPredicted RBP32.39■■■□□ 2.78
CHKA-202ENST00000356135 PPM1GO15355 546 aaPredicted RBP32.39■■■□□ 2.78
CHKA-202ENST00000356135 CABLES1Q8TDN4 633 aa32.39■■■□□ 2.78
CHKA-202ENST00000356135 AATKQ6ZMQ8 1374 aa32.38■■■□□ 2.77
CHKA-202ENST00000356135 USP54Q70EL1 1684 aa32.38■■■□□ 2.77
CHKA-202ENST00000356135 GCP02774 474 aa32.35■■■□□ 2.77
CHKA-202ENST00000356135 ARHGEF10O15013 1369 aa32.35■■■□□ 2.77
CHKA-202ENST00000356135 USP19O94966 1318 aa32.35■■■□□ 2.77
CHKA-202ENST00000356135 MAP2P11137 1827 aaKnown RBP32.35■■■□□ 2.77
CHKA-202ENST00000356135 YTHDC1Q96MU7 727 aaKnown RBP32.35■■■□□ 2.77
CHKA-202ENST00000356135 MED1Q15648 1581 aaPredicted RBP32.34■■■□□ 2.77
CHKA-202ENST00000356135 LRRC59Q96AG4 307 aaKnown RBP32.34■■■□□ 2.77
CHKA-202ENST00000356135 PHLPP1O60346 1717 aa32.32■■■□□ 2.76
CHKA-202ENST00000356135 MAP3K19Q56UN5 1328 aa32.32■■■□□ 2.76
CHKA-202ENST00000356135 KCNH5Q8NCM2 988 aa32.32■■■□□ 2.76
CHKA-202ENST00000356135 SLIT3O75094 1523 aa32.3■■■□□ 2.76
CHKA-202ENST00000356135 FAM9BQ8IZU0 186 aa32.3■■■□□ 2.76
CHKA-202ENST00000356135 PNISRQ8TF01 805 aaKnown RBP32.3■■■□□ 2.76
CHKA-202ENST00000356135 CENPBP07199 599 aaPredicted RBP32.29■■■□□ 2.76
CHKA-202ENST00000356135 NFAT5O94916 1531 aa32.29■■■□□ 2.76
CHKA-202ENST00000356135 ZBTB7CA1YPR0 619 aa32.28■■■□□ 2.76
CHKA-202ENST00000356135 COL16A1Q07092 1604 aaPredicted RBP32.28■■■□□ 2.76
CHKA-202ENST00000356135 ZC3H6P61129 1189 aaKnown RBP32.27■■■□□ 2.76
CHKA-202ENST00000356135 CFAP53Q96M91 514 aa32.26■■■□□ 2.75
CHKA-202ENST00000356135 SMG6Q86US8 1419 aaKnown RBP32.26■■■□□ 2.75
CHKA-202ENST00000356135 AMPHP49418 695 aa32.24■■■□□ 2.75
CHKA-202ENST00000356135 PNPLA6Q8IY17 1366 aa32.24■■■□□ 2.75
CHKA-202ENST00000356135 PEAK1Q9H792 1746 aa32.24■■■□□ 2.75
CHKA-202ENST00000356135 HSP90AB2PQ58FF8 381 aa32.23■■■□□ 2.75
CHKA-202ENST00000356135 PHRF1Q9P1Y6 1649 aaKnown RBP32.23■■■□□ 2.75
CHKA-202ENST00000356135 CRYBG1Q9Y4K1 1723 aa32.22■■■□□ 2.75
CHKA-202ENST00000356135 ARHGEF25Q86VW2 580 aa32.22■■■□□ 2.75
CHKA-202ENST00000356135 COL3A1P02461 1466 aaPredicted RBP32.2■■■□□ 2.75
CHKA-202ENST00000356135 HAP1P54257 671 aaPredicted RBP32.19■■■□□ 2.74
CHKA-202ENST00000356135 CDK12Q9NYV4 1490 aaPredicted RBP32.19■■■□□ 2.74
CHKA-202ENST00000356135 HOXC9P31274 260 aa32.19■■■□□ 2.74
CHKA-202ENST00000356135 INSRP06213 1382 aa32.18■■■□□ 2.74
CHKA-202ENST00000356135 LTN1O94822 1766 aa32.18■■■□□ 2.74
CHKA-202ENST00000356135 DIAPH1O60610 1272 aaKnown RBP32.17■■■□□ 2.74
CHKA-202ENST00000356135 HSPA1LP34931 641 aa32.17■■■□□ 2.74
CHKA-202ENST00000356135 ADAMTS8Q9UP79 889 aa32.17■■■□□ 2.74
CHKA-202ENST00000356135 FLT4P35916 1363 aa32.16■■■□□ 2.74
CHKA-202ENST00000356135 WDR43Q15061 677 aaKnown RBP eCLIP32.15■■■□□ 2.74
CHKA-202ENST00000356135 KIAA0232Q92628 1395 aa32.14■■■□□ 2.74
CHKA-202ENST00000356135 CHRNA2Q15822 529 aa32.14■■■□□ 2.74
CHKA-202ENST00000356135 IP6K1Q92551 441 aa32.14■■■□□ 2.74
CHKA-202ENST00000356135 IL13P35225 146 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms