RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 DMRT2Q9Y5R5 561 aa18.28■□□□□ 0.52
HOXA1-202ENST00000355633 PHF8Q9UPP1 1060 aa18.27■□□□□ 0.52
HOXA1-202ENST00000355633 SSH2Q76I76 1423 aa18.27■□□□□ 0.52
HOXA1-202ENST00000355633 DCCP43146 1447 aa18.26■□□□□ 0.51
HOXA1-202ENST00000355633 ZNF335Q9H4Z2 1342 aaPredicted RBP18.26■□□□□ 0.51
HOXA1-202ENST00000355633 MTHFSP49914 203 aa18.26■□□□□ 0.51
HOXA1-202ENST00000355633 TTC21AQ8NDW8 1320 aa18.25■□□□□ 0.51
HOXA1-202ENST00000355633 ESCO1Q5FWF5 840 aa18.25■□□□□ 0.51
HOXA1-202ENST00000355633 COG3Q96JB2 828 aa18.25■□□□□ 0.51
HOXA1-202ENST00000355633 WDR43Q15061 677 aaKnown RBP eCLIP18.25■□□□□ 0.51
HOXA1-202ENST00000355633 XIRP1Q702N8 1843 aaKnown RBP18.25■□□□□ 0.51
HOXA1-202ENST00000355633 ATF3P18847 181 aa18.24■□□□□ 0.51
HOXA1-202ENST00000355633 ZRANB1Q9UGI0 708 aa18.24■□□□□ 0.51
HOXA1-202ENST00000355633 SCAF1Q9H7N4 1312 aaKnown RBP18.24■□□□□ 0.51
HOXA1-202ENST00000355633 LRRC7Q96NW7 1537 aa18.23■□□□□ 0.51
HOXA1-202ENST00000355633 CFAP53Q96M91 514 aa18.23■□□□□ 0.51
HOXA1-202ENST00000355633 INSRP06213 1382 aa18.23■□□□□ 0.51
HOXA1-202ENST00000355633 MSH6P52701 1360 aa18.23■□□□□ 0.51
HOXA1-202ENST00000355633 C1orf167Q5SNV9 1468 aa18.23■□□□□ 0.51
HOXA1-202ENST00000355633 CADPS2Q86UW7 1296 aa18.21■□□□□ 0.51
HOXA1-202ENST00000355633 ORAI2Q96SN7 254 aa18.21■□□□□ 0.51
HOXA1-202ENST00000355633 ADAMTS8Q9UP79 889 aa18.21■□□□□ 0.51
HOXA1-202ENST00000355633 OVOS2A0A0J9YW53 1432 aa18.21■□□□□ 0.51
HOXA1-202ENST00000355633 OVOS2Q6IE36 1432 aa18.21■□□□□ 0.51
HOXA1-202ENST00000355633 KIF1AQ12756 1690 aa18.2■□□□□ 0.5
HOXA1-202ENST00000355633 MST1RQ04912 1400 aa18.2■□□□□ 0.5
HOXA1-202ENST00000355633 SHPRHQ149N8 1683 aa18.2■□□□□ 0.5
HOXA1-202ENST00000355633 MAP2P11137 1827 aaKnown RBP18.2■□□□□ 0.5
HOXA1-202ENST00000355633 BLMP54132 1417 aaPredicted RBP18.2■□□□□ 0.5
HOXA1-202ENST00000355633 ZBED9Q6R2W3 1325 aa18.19■□□□□ 0.5
HOXA1-202ENST00000355633 AATKQ6ZMQ8 1374 aa18.19■□□□□ 0.5
HOXA1-202ENST00000355633 PIK3C2AO00443 1686 aa18.19■□□□□ 0.5
HOXA1-202ENST00000355633 PSME1Q06323 249 aa18.18■□□□□ 0.5
HOXA1-202ENST00000355633 USP31Q70CQ4 1352 aa18.17■□□□□ 0.5
HOXA1-202ENST00000355633 POLKQ9UBT6 870 aa18.17■□□□□ 0.5
HOXA1-202ENST00000355633 PAK3O75914 559 aaPredicted RBP18.16■□□□□ 0.5
HOXA1-202ENST00000355633 FBLN1P23142 703 aa18.16■□□□□ 0.5
HOXA1-202ENST00000355633 FOXO3O43524 673 aa18.15■□□□□ 0.5
HOXA1-202ENST00000355633 SMG6Q86US8 1419 aaKnown RBP18.15■□□□□ 0.5
HOXA1-202ENST00000355633 COL3A1P02461 1466 aaPredicted RBP18.15■□□□□ 0.5
HOXA1-202ENST00000355633 PNPLA6Q8IY17 1366 aa18.15■□□□□ 0.5
HOXA1-202ENST00000355633 USP54Q70EL1 1684 aa18.15■□□□□ 0.5
HOXA1-202ENST00000355633 NLRP6P59044 892 aa18.14■□□□□ 0.49
HOXA1-202ENST00000355633 ABTB2Q8N961 1025 aa18.14■□□□□ 0.49
HOXA1-202ENST00000355633 PPM1GO15355 546 aaPredicted RBP18.13■□□□□ 0.49
HOXA1-202ENST00000355633 EMILIN1Q9Y6C2 1016 aa18.13■□□□□ 0.49
HOXA1-202ENST00000355633 CDK12Q9NYV4 1490 aaPredicted RBP18.13■□□□□ 0.49
HOXA1-202ENST00000355633 SENP3-EIF4A1A0A087X0R7 540 aa18.13■□□□□ 0.49
HOXA1-202ENST00000355633 MARF1Q9Y4F3 1742 aaKnown RBP18.12■□□□□ 0.49
HOXA1-202ENST00000355633 RRS1Q15050 365 aaKnown RBP18.12■□□□□ 0.49
HOXA1-202ENST00000355633 NUDCQ9Y266 331 aa18.12■□□□□ 0.49
HOXA1-202ENST00000355633 DIAPH1O60610 1272 aaKnown RBP18.11■□□□□ 0.49
HOXA1-202ENST00000355633 TRPM3Q9HCF6 1732 aaPredicted RBP18.1■□□□□ 0.49
HOXA1-202ENST00000355633 XPCQ01831 940 aaPredicted RBP18.1■□□□□ 0.49
HOXA1-202ENST00000355633 NUTM2GQ5VZR2 741 aa18.1■□□□□ 0.49
HOXA1-202ENST00000355633 KRT28Q7Z3Y7 464 aa18.1■□□□□ 0.49
HOXA1-202ENST00000355633 SOX12O15370 315 aa18.1■□□□□ 0.49
HOXA1-202ENST00000355633 U2AF1L5P0DN76 240 aaPredicted RBP18.09■□□□□ 0.49
HOXA1-202ENST00000355633 U2AF1Q01081 240 aaKnown RBP eCLIP18.09■□□□□ 0.49
HOXA1-202ENST00000355633 CCDC146Q8IYE0 955 aa18.09■□□□□ 0.49
HOXA1-202ENST00000355633 U2SURPO15042 1029 aaKnown RBP18.08■□□□□ 0.49
HOXA1-202ENST00000355633 SALL2Q9Y467 1007 aaPredicted RBP18.08■□□□□ 0.48
HOXA1-202ENST00000355633 NPHP3Q7Z494 1330 aa18.07■□□□□ 0.48
HOXA1-202ENST00000355633 SLAIN2Q9P270 581 aa18.06■□□□□ 0.48
HOXA1-202ENST00000355633 PEAK1Q9H792 1746 aa18.06■□□□□ 0.48
HOXA1-202ENST00000355633 BRINP3Q76B58 766 aa18.05■□□□□ 0.48
HOXA1-202ENST00000355633 MAP3K19Q56UN5 1328 aa18.05■□□□□ 0.48
HOXA1-202ENST00000355633 LTBP4Q8N2S1 1624 aa18.05■□□□□ 0.48
HOXA1-202ENST00000355633 RUNDC1Q96C34 613 aa18.05■□□□□ 0.48
HOXA1-202ENST00000355633 ALS2Q96Q42 1657 aa18.04■□□□□ 0.48
HOXA1-202ENST00000355633 APAF1O14727 1248 aa18.04■□□□□ 0.48
HOXA1-202ENST00000355633 DDX17Q92841 729 aaKnown RBP18.04■□□□□ 0.48
HOXA1-202ENST00000355633 SBNO1A3KN83 1393 aa18.03■□□□□ 0.48
HOXA1-202ENST00000355633 LMOD2Q6P5Q4 547 aa18.03■□□□□ 0.48
HOXA1-202ENST00000355633 IL13P35225 146 aa18.03■□□□□ 0.48
HOXA1-202ENST00000355633 FLT4P35916 1363 aa18.02■□□□□ 0.48
HOXA1-202ENST00000355633 PXDNQ92626 1479 aa18.02■□□□□ 0.48
HOXA1-202ENST00000355633 KCNH5Q8NCM2 988 aa18.02■□□□□ 0.48
HOXA1-202ENST00000355633 AMPHP49418 695 aa18.01■□□□□ 0.47
HOXA1-202ENST00000355633 KIF24Q5T7B8 1368 aa18.01■□□□□ 0.47
HOXA1-202ENST00000355633 SLIT3O75094 1523 aa18.01■□□□□ 0.47
HOXA1-202ENST00000355633 NFAT5O94916 1531 aa18.01■□□□□ 0.47
HOXA1-202ENST00000355633 NGEFQ8N5V2 710 aa18.01■□□□□ 0.47
HOXA1-202ENST00000355633 IQSEC2Q5JU85 1478 aa18■□□□□ 0.47
HOXA1-202ENST00000355633 PDE3BQ13370 1112 aa18■□□□□ 0.47
HOXA1-202ENST00000355633 HSP90AB2PQ58FF8 381 aa18■□□□□ 0.47
HOXA1-202ENST00000355633 PNNQ9H307 717 aaKnown RBP18■□□□□ 0.47
HOXA1-202ENST00000355633 LTN1O94822 1766 aa18■□□□□ 0.47
HOXA1-202ENST00000355633 USP19O94966 1318 aa17.99■□□□□ 0.47
HOXA1-202ENST00000355633 TNS3Q68CZ2 1445 aa17.99■□□□□ 0.47
HOXA1-202ENST00000355633 EIF4A2Q14240 407 aaKnown RBP17.99■□□□□ 0.47
HOXA1-202ENST00000355633 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
HOXA1-202ENST00000355633 FCHSD2O94868 740 aa17.98■□□□□ 0.47
HOXA1-202ENST00000355633 TCP11L2Q8N4U5 519 aa17.98■□□□□ 0.47
HOXA1-202ENST00000355633 PLEKHF1Q96S99 279 aa17.98■□□□□ 0.47
HOXA1-202ENST00000355633 GCP02774 474 aa17.98■□□□□ 0.47
HOXA1-202ENST00000355633 RTL1A6NKG5 1358 aa17.97■□□□□ 0.47
HOXA1-202ENST00000355633 SPATA31A3Q5VYP0 1347 aa17.96■□□□□ 0.47
HOXA1-202ENST00000355633 ZNF521Q96K83 1311 aa17.96■□□□□ 0.47
HOXA1-202ENST00000355633 MAPK8IP3Q9UPT6 1336 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms