RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 SLU7O95391 586 aaKnown RBP13.67□□□□□ -0.22
NUDCD3-202ENST00000355451 ARL1P40616 181 aaPredicted RBP13.67□□□□□ -0.22
NUDCD3-202ENST00000355451 FAM161AQ3B820 660 aa13.67□□□□□ -0.22
NUDCD3-202ENST00000355451 RBM19Q9Y4C8 960 aaKnown RBP13.67□□□□□ -0.22
NUDCD3-202ENST00000355451 ANKRD18BA2A2Z9 1011 aa13.66□□□□□ -0.22
NUDCD3-202ENST00000355451 ZNF354CQ86Y25 554 aa13.66□□□□□ -0.22
NUDCD3-202ENST00000355451 FERP16591 822 aa13.66□□□□□ -0.22
NUDCD3-202ENST00000355451 PIP4K2AP48426 406 aaPredicted RBP13.66□□□□□ -0.22
NUDCD3-202ENST00000355451 BMP2KQ9NSY1 1161 aaPredicted RBP13.66□□□□□ -0.22
NUDCD3-202ENST00000355451 SLC26A8Q96RN1 970 aa13.66□□□□□ -0.22
NUDCD3-202ENST00000355451 JAKMIP3Q5VZ66 844 aa13.65□□□□□ -0.22
NUDCD3-202ENST00000355451 RRP7AQ9Y3A4 280 aaKnown RBP13.65□□□□□ -0.22
NUDCD3-202ENST00000355451 FERMT2Q96AC1 680 aa13.65□□□□□ -0.22
NUDCD3-202ENST00000355451 USP5P45974 858 aa13.64□□□□□ -0.23
NUDCD3-202ENST00000355451 RAB3IL1Q8TBN0 382 aa13.64□□□□□ -0.23
NUDCD3-202ENST00000355451 TRIM22Q8IYM9 498 aa13.64□□□□□ -0.23
NUDCD3-202ENST00000355451 SH3BP5O60239 455 aa13.64□□□□□ -0.23
NUDCD3-202ENST00000355451 ROCK1Q13464 1354 aa13.64□□□□□ -0.23
NUDCD3-202ENST00000355451 TTC39AQ5SRH9 613 aa13.63□□□□□ -0.23
NUDCD3-202ENST00000355451 TRAK1Q9UPV9 953 aa13.63□□□□□ -0.23
NUDCD3-202ENST00000355451 NINLQ9Y2I6 1382 aa13.63□□□□□ -0.23
NUDCD3-202ENST00000355451 BIRC2Q13490 618 aa13.63□□□□□ -0.23
NUDCD3-202ENST00000355451 PDE3BQ13370 1112 aa13.63□□□□□ -0.23
NUDCD3-202ENST00000355451 FMNL2Q96PY5 1086 aa13.63□□□□□ -0.23
NUDCD3-202ENST00000355451 HOOK3Q86VS8 718 aa13.62□□□□□ -0.23
NUDCD3-202ENST00000355451 PPP1R12BO60237 982 aaPredicted RBP13.62□□□□□ -0.23
NUDCD3-202ENST00000355451 MAP2K1Q02750 393 aaPredicted RBP13.62□□□□□ -0.23
NUDCD3-202ENST00000355451 LRRFIP2Q9Y608 721 aaKnown RBP13.62□□□□□ -0.23
NUDCD3-202ENST00000355451 TAF3Q5VWG9 929 aa13.62□□□□□ -0.23
NUDCD3-202ENST00000355451 FAM13BQ9NYF5 915 aa13.62□□□□□ -0.23
NUDCD3-202ENST00000355451 E9PSI1 815 aa13.62□□□□□ -0.23
NUDCD3-202ENST00000355451 KINO60870 393 aaKnown RBP13.62□□□□□ -0.23
NUDCD3-202ENST00000355451 CENPQQ7L2Z9 268 aaPredicted RBP13.61□□□□□ -0.23
NUDCD3-202ENST00000355451 PIBF1Q8WXW3 757 aa13.61□□□□□ -0.23
NUDCD3-202ENST00000355451 TIGD1Q96MW7 591 aa13.61□□□□□ -0.23
NUDCD3-202ENST00000355451 PSMA5P28066 241 aa13.61□□□□□ -0.23
NUDCD3-202ENST00000355451 BMS1Q14692 1282 aaKnown RBP13.61□□□□□ -0.23
NUDCD3-202ENST00000355451 DNAJC2Q99543 621 aaKnown RBP13.6□□□□□ -0.23
NUDCD3-202ENST00000355451 BCL2L13Q9BXK5 485 aa13.6□□□□□ -0.23
NUDCD3-202ENST00000355451 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.6□□□□□ -0.23
NUDCD3-202ENST00000355451 CTNNA2P26232 953 aa13.6□□□□□ -0.23
NUDCD3-202ENST00000355451 FAM193AP78312 1265 aa13.6□□□□□ -0.23
NUDCD3-202ENST00000355451 TSNARE1Q96NA8 513 aa13.6□□□□□ -0.23
NUDCD3-202ENST00000355451 CCDC113Q9H0I3 377 aa13.6□□□□□ -0.23
NUDCD3-202ENST00000355451 GIMAP7Q8NHV1 300 aa13.6□□□□□ -0.23
NUDCD3-202ENST00000355451 SIN3AQ96ST3 1273 aa13.6□□□□□ -0.23
NUDCD3-202ENST00000355451 CCDC69A6NI79 296 aa13.6□□□□□ -0.23
NUDCD3-202ENST00000355451 HMGB2P26583 209 aaKnown RBP13.6□□□□□ -0.23
NUDCD3-202ENST00000355451 PPFIBP1Q86W92 1011 aa13.6□□□□□ -0.23
NUDCD3-202ENST00000355451 MPHOSPH8Q99549 860 aa13.6□□□□□ -0.23
NUDCD3-202ENST00000355451 CCP110O43303 1012 aa13.59□□□□□ -0.23
NUDCD3-202ENST00000355451 FERMT1Q9BQL6 677 aa13.59□□□□□ -0.23
NUDCD3-202ENST00000355451 PKD2Q13563 968 aa13.59□□□□□ -0.23
NUDCD3-202ENST00000355451 UBE4AQ14139 1066 aa13.59□□□□□ -0.23
NUDCD3-202ENST00000355451 TSPYL4Q9UJ04 414 aa13.59□□□□□ -0.23
NUDCD3-202ENST00000355451 CFAP45Q9UL16 551 aa13.59□□□□□ -0.23
NUDCD3-202ENST00000355451 GSTTP1A0A1W2PQM5 241 aa13.59□□□□□ -0.23
NUDCD3-202ENST00000355451 CTNNBL1Q8WYA6 563 aaPredicted RBP13.59□□□□□ -0.23
NUDCD3-202ENST00000355451 RSPH6AQ9H0K4 717 aa13.59□□□□□ -0.23
NUDCD3-202ENST00000355451 PRPF31Q8WWY3 499 aaKnown RBP13.59□□□□□ -0.23
NUDCD3-202ENST00000355451 NACAP1Q9BZK3 213 aa13.59□□□□□ -0.23
NUDCD3-202ENST00000355451 LRRC45Q96CN5 670 aa13.58□□□□□ -0.23
NUDCD3-202ENST00000355451 EFCAB2Q5VUJ9 269 aa13.58□□□□□ -0.24
NUDCD3-202ENST00000355451 MACROD2A1Z1Q3 448 aa13.58□□□□□ -0.24
NUDCD3-202ENST00000355451 NFKBIBQ15653 356 aa13.58□□□□□ -0.24
NUDCD3-202ENST00000355451 CCDC158Q5M9N0 1113 aa13.58□□□□□ -0.24
NUDCD3-202ENST00000355451 NUP133Q8WUM0 1156 aa13.58□□□□□ -0.24
NUDCD3-202ENST00000355451 GTPBP4Q9BZE4 634 aaKnown RBP13.58□□□□□ -0.24
NUDCD3-202ENST00000355451 SERPINA10Q9UK55 444 aa13.57□□□□□ -0.24
NUDCD3-202ENST00000355451 CRACR2BQ8N4Y2 399 aaPredicted RBP13.57□□□□□ -0.24
NUDCD3-202ENST00000355451 FSD1Q9BTV5 496 aa13.57□□□□□ -0.24
NUDCD3-202ENST00000355451 TRIM5Q9C035 493 aa13.57□□□□□ -0.24
NUDCD3-202ENST00000355451 ERLIN1O75477 346 aa13.57□□□□□ -0.24
NUDCD3-202ENST00000355451 IQCEQ6IPM2 695 aa13.57□□□□□ -0.24
NUDCD3-202ENST00000355451 LIG1P18858 919 aa13.57□□□□□ -0.24
NUDCD3-202ENST00000355451 LMAN1P49257 510 aa13.57□□□□□ -0.24
NUDCD3-202ENST00000355451 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.57□□□□□ -0.24
NUDCD3-202ENST00000355451 NUTM2GQ5VZR2 741 aa13.57□□□□□ -0.24
NUDCD3-202ENST00000355451 SERPINC1P01008 464 aa13.57□□□□□ -0.24
NUDCD3-202ENST00000355451 TAF12Q16514 161 aa13.56□□□□□ -0.24
NUDCD3-202ENST00000355451 CNTROBQ8N137 903 aa13.56□□□□□ -0.24
NUDCD3-202ENST00000355451 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
NUDCD3-202ENST00000355451 CCDC57Q2TAC2 916 aa13.56□□□□□ -0.24
NUDCD3-202ENST00000355451 DZIP1LQ8IYY4 767 aaKnown RBP13.55□□□□□ -0.24
NUDCD3-202ENST00000355451 BAZ1BQ9UIG0 1483 aaKnown RBP13.55□□□□□ -0.24
NUDCD3-202ENST00000355451 MPHOSPH6Q99547 160 aaKnown RBP13.55□□□□□ -0.24
NUDCD3-202ENST00000355451 CEBPZQ03701 1054 aaKnown RBP13.55□□□□□ -0.24
NUDCD3-202ENST00000355451 LARP1Q6PKG0 1096 aaKnown RBP13.55□□□□□ -0.24
NUDCD3-202ENST00000355451 BIN2Q9UBW5 565 aaPredicted RBP13.55□□□□□ -0.24
NUDCD3-202ENST00000355451 CLEC11AQ9Y240 323 aa13.55□□□□□ -0.24
NUDCD3-202ENST00000355451 OTUD6BQ8N6M0 293 aa13.55□□□□□ -0.24
NUDCD3-202ENST00000355451 PPP1R9BQ96SB3 815 aa13.55□□□□□ -0.24
NUDCD3-202ENST00000355451 TAF4BQ92750 862 aa13.54□□□□□ -0.24
NUDCD3-202ENST00000355451 INTS3Q68E01 1043 aaKnown RBP13.54□□□□□ -0.24
NUDCD3-202ENST00000355451 GOPCQ9HD26 462 aa13.54□□□□□ -0.24
NUDCD3-202ENST00000355451 DACH1Q9UI36 760 aa13.54□□□□□ -0.24
NUDCD3-202ENST00000355451 EVC2Q86UK5 1308 aa13.54□□□□□ -0.24
NUDCD3-202ENST00000355451 SEC63Q9UGP8 760 aaKnown RBP13.54□□□□□ -0.24
NUDCD3-202ENST00000355451 CARMIL2Q6F5E8 1435 aa13.54□□□□□ -0.24
NUDCD3-202ENST00000355451 TMCO5BA8MYB1 307 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms