RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 DESP17661 470 aa9.51□□□□□ -0.89
SCN8A-201ENST00000354534 JAKMIP3Q5VZ66 844 aa9.51□□□□□ -0.89
SCN8A-201ENST00000354534 BAZ1BQ9UIG0 1483 aaKnown RBP9.51□□□□□ -0.89
SCN8A-201ENST00000354534 MNAT1P51948 309 aa9.51□□□□□ -0.89
SCN8A-201ENST00000354534 CEBPZQ03701 1054 aaKnown RBP9.51□□□□□ -0.89
SCN8A-201ENST00000354534 RALYLQ86SE5 291 aaKnown RBP9.51□□□□□ -0.89
SCN8A-201ENST00000354534 C9orf78Q9NZ63 289 aaPredicted RBP9.51□□□□□ -0.89
SCN8A-201ENST00000354534 FANCIQ9NVI1 1328 aa9.51□□□□□ -0.89
SCN8A-201ENST00000354534 ELL2O00472 640 aaPredicted RBP9.51□□□□□ -0.89
SCN8A-201ENST00000354534 ZFP91Q96JP5 570 aaPredicted RBP9.51□□□□□ -0.89
SCN8A-201ENST00000354534 KIF3CO14782 793 aa9.51□□□□□ -0.89
SCN8A-201ENST00000354534 WDR66Q8TBY9 1149 aa9.51□□□□□ -0.89
SCN8A-201ENST00000354534 ZHX3Q9H4I2 956 aa9.51□□□□□ -0.89
SCN8A-201ENST00000354534 POLR3GO15318 223 aaPredicted RBP9.5□□□□□ -0.89
SCN8A-201ENST00000354534 IRX3P78415 501 aaPredicted RBP9.5□□□□□ -0.89
SCN8A-201ENST00000354534 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.5□□□□□ -0.89
SCN8A-201ENST00000354534 EIF4G1Q04637 1599 aaKnown RBP9.5□□□□□ -0.89
SCN8A-201ENST00000354534 FLIIQ13045 1269 aa9.5□□□□□ -0.89
SCN8A-201ENST00000354534 BCL2L13Q9BXK5 485 aa9.5□□□□□ -0.89
SCN8A-201ENST00000354534 FAM107BQ9H098 131 aa9.5□□□□□ -0.89
SCN8A-201ENST00000354534 TERF2IPQ9NYB0 399 aa9.5□□□□□ -0.89
SCN8A-201ENST00000354534 RRP7AQ9Y3A4 280 aaKnown RBP9.5□□□□□ -0.89
SCN8A-201ENST00000354534 IFFO1Q0D2I5 559 aa9.5□□□□□ -0.89
SCN8A-201ENST00000354534 ROCK1Q13464 1354 aa9.5□□□□□ -0.89
SCN8A-201ENST00000354534 ATP2B1P20020 1258 aa9.5□□□□□ -0.89
SCN8A-201ENST00000354534 SYTL4Q96C24 671 aaPredicted RBP9.5□□□□□ -0.89
SCN8A-201ENST00000354534 AMPHP49418 695 aa9.49□□□□□ -0.89
SCN8A-201ENST00000354534 NLRP13Q86W25 1043 aa9.49□□□□□ -0.89
SCN8A-201ENST00000354534 FAM114A1Q8IWE2 563 aa9.49□□□□□ -0.89
SCN8A-201ENST00000354534 CCDC148Q8NFR7 591 aa9.49□□□□□ -0.89
SCN8A-201ENST00000354534 DNAAF4Q8WXU2 420 aa9.49□□□□□ -0.89
SCN8A-201ENST00000354534 ZHX1Q9UKY1 873 aaPredicted RBP9.49□□□□□ -0.89
SCN8A-201ENST00000354534 KIF15Q9NS87 1388 aa9.49□□□□□ -0.89
SCN8A-201ENST00000354534 NUTM2DQ5VT03 806 aaPredicted RBP9.49□□□□□ -0.89
SCN8A-201ENST00000354534 PLIN1O60240 522 aa9.49□□□□□ -0.89
SCN8A-201ENST00000354534 MATR3P43243 847 aaKnown RBP eCLIP9.49□□□□□ -0.89
SCN8A-201ENST00000354534 INTS3Q68E01 1043 aaKnown RBP9.49□□□□□ -0.89
SCN8A-201ENST00000354534 GCOM1H8Y6P7 765 aaPredicted RBP9.49□□□□□ -0.89
SCN8A-201ENST00000354534 MYZAPP0CAP1 466 aa9.49□□□□□ -0.89
SCN8A-201ENST00000354534 EVA1CP58658 441 aa9.49□□□□□ -0.89
SCN8A-201ENST00000354534 HSPA5P11021 654 aaKnown RBP9.49□□□□□ -0.89
SCN8A-201ENST00000354534 C6orf163Q5TEZ5 329 aa9.49□□□□□ -0.89
SCN8A-201ENST00000354534 SUDS3Q9H7L9 328 aaPredicted RBP9.49□□□□□ -0.89
SCN8A-201ENST00000354534 STIM1Q13586 685 aa9.48□□□□□ -0.89
SCN8A-201ENST00000354534 MAP9Q49MG5 647 aa9.48□□□□□ -0.89
SCN8A-201ENST00000354534 APBB1IPQ7Z5R6 666 aaPredicted RBP9.48□□□□□ -0.89
SCN8A-201ENST00000354534 TMCO4Q5TGY1 634 aa9.48□□□□□ -0.89
SCN8A-201ENST00000354534 PIP4K2AP48426 406 aaPredicted RBP9.48□□□□□ -0.89
SCN8A-201ENST00000354534 TTC36A6NLP5 189 aa9.48□□□□□ -0.89
SCN8A-201ENST00000354534 FOXD1Q16676 465 aa9.48□□□□□ -0.89
SCN8A-201ENST00000354534 LUZP1Q86V48 1076 aa9.48□□□□□ -0.89
SCN8A-201ENST00000354534 COMMD10Q9Y6G5 202 aa9.48□□□□□ -0.89
SCN8A-201ENST00000354534 BBXQ8WY36 941 aaPredicted RBP9.47□□□□□ -0.89
SCN8A-201ENST00000354534 FEZ2Q9UHY8 353 aaPredicted RBP9.47□□□□□ -0.89
SCN8A-201ENST00000354534 PRPF40AO75400 957 aaKnown RBP9.47□□□□□ -0.89
SCN8A-201ENST00000354534 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.47□□□□□ -0.89
SCN8A-201ENST00000354534 V9GYY5 206 aaPredicted RBP9.47□□□□□ -0.89
SCN8A-201ENST00000354534 KIF7Q2M1P5 1343 aa9.47□□□□□ -0.89
SCN8A-201ENST00000354534 GSTTP1A0A1W2PQM5 241 aa9.47□□□□□ -0.89
SCN8A-201ENST00000354534 EIF2S2P20042 333 aaKnown RBP9.47□□□□□ -0.89
SCN8A-201ENST00000354534 DHX8Q14562 1220 aaKnown RBP9.47□□□□□ -0.89
SCN8A-201ENST00000354534 ARID4AP29374 1257 aaPredicted RBP9.47□□□□□ -0.89
SCN8A-201ENST00000354534 CASQ1P31415 396 aa9.47□□□□□ -0.89
SCN8A-201ENST00000354534 CRBNQ96SW2 442 aa9.47□□□□□ -0.89
SCN8A-201ENST00000354534 UBXN4Q92575 508 aa9.47□□□□□ -0.89
SCN8A-201ENST00000354534 TAF4BQ92750 862 aa9.47□□□□□ -0.89
SCN8A-201ENST00000354534 FERP16591 822 aa9.47□□□□□ -0.89
SCN8A-201ENST00000354534 CPSF2Q9P2I0 782 aaKnown RBP9.47□□□□□ -0.89
SCN8A-201ENST00000354534 PHF23Q9BUL5 403 aaPredicted RBP9.46□□□□□ -0.89
SCN8A-201ENST00000354534 GIGYF2Q6Y7W6 1299 aaKnown RBP9.46□□□□□ -0.89
SCN8A-201ENST00000354534 GGT6Q6P531 493 aa9.46□□□□□ -0.89
SCN8A-201ENST00000354534 WDR70Q9NW82 654 aa9.46□□□□□ -0.89
SCN8A-201ENST00000354534 NGDNQ8NEJ9 315 aaKnown RBP9.46□□□□□ -0.89
SCN8A-201ENST00000354534 SEPT10Q9P0V9 454 aa9.46□□□□□ -0.89
SCN8A-201ENST00000354534 DDX46Q7L014 1031 aaKnown RBP9.46□□□□□ -0.9
SCN8A-201ENST00000354534 DACH1Q9UI36 760 aa9.46□□□□□ -0.9
SCN8A-201ENST00000354534 NOL3O60936 208 aaKnown RBP9.46□□□□□ -0.9
SCN8A-201ENST00000354534 GTF2F1P35269 517 aaKnown RBP eCLIP9.46□□□□□ -0.9
SCN8A-201ENST00000354534 DZIP1Q86YF9 867 aaKnown RBP9.46□□□□□ -0.9
SCN8A-201ENST00000354534 GBP3Q9H0R5 595 aa9.46□□□□□ -0.9
SCN8A-201ENST00000354534 TTC16Q8NEE8 873 aa9.45□□□□□ -0.9
SCN8A-201ENST00000354534 CCDC192P0DO97 292 aa9.45□□□□□ -0.9
SCN8A-201ENST00000354534 CCDC6Q16204 474 aa9.45□□□□□ -0.9
SCN8A-201ENST00000354534 CCDC178Q5BJE1 867 aa9.45□□□□□ -0.9
SCN8A-201ENST00000354534 CFAP58Q5T655 872 aa9.45□□□□□ -0.9
SCN8A-201ENST00000354534 VPS8Q8N3P4 1428 aa9.45□□□□□ -0.9
SCN8A-201ENST00000354534 EPB41L2O43491 1005 aaKnown RBP9.45□□□□□ -0.9
SCN8A-201ENST00000354534 WASHC4Q2M389 1173 aa9.45□□□□□ -0.9
SCN8A-201ENST00000354534 FBF1Q8TES7 1133 aa9.45□□□□□ -0.9
SCN8A-201ENST00000354534 SPECC1Q5M775 1068 aa9.45□□□□□ -0.9
SCN8A-201ENST00000354534 TNMDQ9H2S6 317 aa9.45□□□□□ -0.9
SCN8A-201ENST00000354534 PSMA5P28066 241 aa9.45□□□□□ -0.9
SCN8A-201ENST00000354534 C22orf23Q9BZE7 217 aa9.45□□□□□ -0.9
SCN8A-201ENST00000354534 HOMER2Q9NSB8 354 aa9.45□□□□□ -0.9
SCN8A-201ENST00000354534 CBFA2T2O43439 604 aa9.44□□□□□ -0.9
SCN8A-201ENST00000354534 CEP83Q9Y592 693 aa9.44□□□□□ -0.9
SCN8A-201ENST00000354534 TDO2P48775 406 aa9.44□□□□□ -0.9
SCN8A-201ENST00000354534 ZNF397Q8NF99 534 aaPredicted RBP9.44□□□□□ -0.9
SCN8A-201ENST00000354534 ZNF396Q96N95 335 aaPredicted RBP9.44□□□□□ -0.9
SCN8A-201ENST00000354534 MCM3P25205 808 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms