RNA–Protein interactions for RNA: ENST00000354532.7

ARHGEF1-203, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-203ENST00000354532 SBNO2Q9Y2G9 1366 aa16.51■□□□□ 0.23
ARHGEF1-203ENST00000354532 ERBB4Q15303 1308 aa16.51■□□□□ 0.23
ARHGEF1-203ENST00000354532 ZC3H13Q5T200 1668 aaKnown RBP16.51■□□□□ 0.23
ARHGEF1-203ENST00000354532 PNNQ9H307 717 aaKnown RBP16.51■□□□□ 0.23
ARHGEF1-203ENST00000354532 SLC12A5Q9H2X9 1139 aa16.5■□□□□ 0.23
ARHGEF1-203ENST00000354532 C14orf93Q9H972 538 aaKnown RBP16.5■□□□□ 0.23
ARHGEF1-203ENST00000354532 MRE11P49959 708 aa16.5■□□□□ 0.23
ARHGEF1-203ENST00000354532 NAP1L5Q96NT1 182 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF1-203ENST00000354532 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
ARHGEF1-203ENST00000354532 MTHFSP49914 203 aa16.49■□□□□ 0.23
ARHGEF1-203ENST00000354532 GRPEL1Q9HAV7 217 aa16.49■□□□□ 0.23
ARHGEF1-203ENST00000354532 ADGRB2O60241 1585 aa16.49■□□□□ 0.23
ARHGEF1-203ENST00000354532 SLC24A1O60721 1099 aa16.49■□□□□ 0.23
ARHGEF1-203ENST00000354532 ZKSCAN2Q63HK3 967 aa16.48■□□□□ 0.23
ARHGEF1-203ENST00000354532 DZIP1LQ8IYY4 767 aaKnown RBP16.48■□□□□ 0.23
ARHGEF1-203ENST00000354532 USP32Q8NFA0 1604 aa16.47■□□□□ 0.23
ARHGEF1-203ENST00000354532 HDAC1Q13547 482 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF1-203ENST00000354532 ADGRB3O60242 1522 aa16.47■□□□□ 0.23
ARHGEF1-203ENST00000354532 RPGRIP1LQ68CZ1 1315 aa16.47■□□□□ 0.23
ARHGEF1-203ENST00000354532 TSR2Q969E8 191 aaKnown RBP16.47■□□□□ 0.23
ARHGEF1-203ENST00000354532 ARHGAP31Q2M1Z3 1444 aa16.47■□□□□ 0.23
ARHGEF1-203ENST00000354532 TRIM27P14373 513 aa16.47■□□□□ 0.23
ARHGEF1-203ENST00000354532 GAS2L3Q86XJ1 694 aa16.46■□□□□ 0.23
ARHGEF1-203ENST00000354532 QRICH2Q9H0J4 1663 aa16.46■□□□□ 0.23
ARHGEF1-203ENST00000354532 MYH16Q9H6N6 1097 aa16.45■□□□□ 0.22
ARHGEF1-203ENST00000354532 SMC5Q8IY18 1101 aa16.45■□□□□ 0.22
ARHGEF1-203ENST00000354532 FTSJ3Q8IY81 847 aaKnown RBP16.45■□□□□ 0.22
ARHGEF1-203ENST00000354532 CLTCQ00610 1675 aaKnown RBP16.45■□□□□ 0.22
ARHGEF1-203ENST00000354532 RBM25P49756 843 aaKnown RBP16.44■□□□□ 0.22
ARHGEF1-203ENST00000354532 TNPO1Q92973 898 aaKnown RBP16.43■□□□□ 0.22
ARHGEF1-203ENST00000354532 PPP6R1Q9UPN7 881 aa16.43■□□□□ 0.22
ARHGEF1-203ENST00000354532 SETBP1Q9Y6X0 1596 aa16.43■□□□□ 0.22
ARHGEF1-203ENST00000354532 DDX11L8A8MPP1 907 aa16.43■□□□□ 0.22
ARHGEF1-203ENST00000354532 HSCBQ8IWL3 235 aa16.43■□□□□ 0.22
ARHGEF1-203ENST00000354532 ESPNB1AK53 854 aa16.43■□□□□ 0.22
ARHGEF1-203ENST00000354532 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
ARHGEF1-203ENST00000354532 SSH1Q8WYL5 1049 aa16.43■□□□□ 0.22
ARHGEF1-203ENST00000354532 EXOSC9Q06265 439 aaKnown RBP16.42■□□□□ 0.22
ARHGEF1-203ENST00000354532 SNX21Q969T3 373 aa16.41■□□□□ 0.22
ARHGEF1-203ENST00000354532 KIF2CQ99661 725 aa16.41■□□□□ 0.22
ARHGEF1-203ENST00000354532 SMC4Q9NTJ3 1288 aa16.41■□□□□ 0.22
ARHGEF1-203ENST00000354532 ARHGEF40Q8TER5 1519 aa16.41■□□□□ 0.22
ARHGEF1-203ENST00000354532 ADGRB1O14514 1584 aa16.41■□□□□ 0.22
ARHGEF1-203ENST00000354532 MINK1Q8N4C8 1332 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF1-203ENST00000354532 PREX1Q8TCU6 1659 aa16.41■□□□□ 0.22
ARHGEF1-203ENST00000354532 ITPRIPQ8IWB1 547 aa16.4■□□□□ 0.22
ARHGEF1-203ENST00000354532 CABP2Q9NPB3 220 aa16.4■□□□□ 0.22
ARHGEF1-203ENST00000354532 ZBTB40Q9NUA8 1239 aa16.4■□□□□ 0.22
ARHGEF1-203ENST00000354532 CD2BP2O95400 341 aaKnown RBP16.4■□□□□ 0.22
ARHGEF1-203ENST00000354532 U2AF1L5P0DN76 240 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF1-203ENST00000354532 U2AF1Q01081 240 aaKnown RBP eCLIP16.4■□□□□ 0.22
ARHGEF1-203ENST00000354532 PLEKHF1Q96S99 279 aa16.4■□□□□ 0.22
ARHGEF1-203ENST00000354532 TRIM35Q9UPQ4 493 aa16.4■□□□□ 0.22
ARHGEF1-203ENST00000354532 HSP90AA1P07900 732 aaKnown RBP16.4■□□□□ 0.22
ARHGEF1-203ENST00000354532 ATF7IPQ6VMQ6 1270 aa16.4■□□□□ 0.22
ARHGEF1-203ENST00000354532 TMEM57Q8N5G2 664 aa16.4■□□□□ 0.22
ARHGEF1-203ENST00000354532 NOB1Q9ULX3 412 aaKnown RBP16.4■□□□□ 0.22
ARHGEF1-203ENST00000354532 AGLP35573 1532 aa16.39■□□□□ 0.21
ARHGEF1-203ENST00000354532 PRAM1Q96QH2 718 aa16.39■□□□□ 0.21
ARHGEF1-203ENST00000354532 DNAJC5Q9H3Z4 198 aa16.39■□□□□ 0.21
ARHGEF1-203ENST00000354532 ISY1Q9ULR0 285 aaKnown RBP16.39■□□□□ 0.21
ARHGEF1-203ENST00000354532 DDX19BQ9UMR2 479 aa16.39■□□□□ 0.21
ARHGEF1-203ENST00000354532 CT47B1P0C2W7 299 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF1-203ENST00000354532 RAB3GAP1Q15042 981 aa16.39■□□□□ 0.21
ARHGEF1-203ENST00000354532 MYO5BQ9ULV0 1848 aa16.39■□□□□ 0.21
ARHGEF1-203ENST00000354532 SRPK2P78362 688 aaKnown RBP16.38■□□□□ 0.21
ARHGEF1-203ENST00000354532 NUCB1Q02818 461 aa16.38■□□□□ 0.21
ARHGEF1-203ENST00000354532 HSP90AA2PQ14568 343 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF1-203ENST00000354532 PIK3C2BO00750 1634 aa16.38■□□□□ 0.21
ARHGEF1-203ENST00000354532 RRP9O43818 475 aaKnown RBP16.38■□□□□ 0.21
ARHGEF1-203ENST00000354532 CFAP53Q96M91 514 aa16.38■□□□□ 0.21
ARHGEF1-203ENST00000354532 WAPLQ7Z5K2 1190 aa16.37■□□□□ 0.21
ARHGEF1-203ENST00000354532 PPLO60437 1756 aa16.37■□□□□ 0.21
ARHGEF1-203ENST00000354532 NEXMIFQ5QGS0 1516 aa16.37■□□□□ 0.21
ARHGEF1-203ENST00000354532 LNPKQ9C0E8 428 aa16.36■□□□□ 0.21
ARHGEF1-203ENST00000354532 TMPOP42166 694 aaKnown RBP16.35■□□□□ 0.21
ARHGEF1-203ENST00000354532 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF1-203ENST00000354532 TULP4Q9NRJ4 1543 aa16.35■□□□□ 0.21
ARHGEF1-203ENST00000354532 CIZ1Q9ULV3 898 aaPredicted RBP16.34■□□□□ 0.21
ARHGEF1-203ENST00000354532 TNRQ92752 1358 aa16.34■□□□□ 0.21
ARHGEF1-203ENST00000354532 VSIG10Q8N0Z9 540 aa16.34■□□□□ 0.21
ARHGEF1-203ENST00000354532 PKNOX2Q96KN3 472 aa16.34■□□□□ 0.21
ARHGEF1-203ENST00000354532 TMEM131LA2VDJ0 1609 aa16.33■□□□□ 0.21
ARHGEF1-203ENST00000354532 RIMS2Q9UQ26 1411 aa16.33■□□□□ 0.21
ARHGEF1-203ENST00000354532 REREQ9P2R6 1566 aa16.33■□□□□ 0.2
ARHGEF1-203ENST00000354532 TXNDC2Q86VQ3 553 aa16.33■□□□□ 0.2
ARHGEF1-203ENST00000354532 CHD1LQ86WJ1 897 aa16.33■□□□□ 0.2
ARHGEF1-203ENST00000354532 RBM42Q9BTD8 480 aaKnown RBP16.33■□□□□ 0.2
ARHGEF1-203ENST00000354532 ZMYND15Q9H091 742 aa16.33■□□□□ 0.2
ARHGEF1-203ENST00000354532 FOXD4L1Q9NU39 408 aa16.33■□□□□ 0.2
ARHGEF1-203ENST00000354532 SLC26A8Q96RN1 970 aa16.32■□□□□ 0.2
ARHGEF1-203ENST00000354532 ANKRD36BQ8N2N9 1353 aa16.32■□□□□ 0.2
ARHGEF1-203ENST00000354532 GLIPR1L2Q4G1C9 344 aa16.32■□□□□ 0.2
ARHGEF1-203ENST00000354532 A2ML1A8K2U0 1454 aa16.32■□□□□ 0.2
ARHGEF1-203ENST00000354532 HSP90AB1P08238 724 aaKnown RBP16.32■□□□□ 0.2
ARHGEF1-203ENST00000354532 EVC2Q86UK5 1308 aa16.31■□□□□ 0.2
ARHGEF1-203ENST00000354532 GBP4Q96PP9 640 aa16.31■□□□□ 0.2
ARHGEF1-203ENST00000354532 ABCC11Q96J66 1382 aa16.31■□□□□ 0.2
ARHGEF1-203ENST00000354532 BMP2KLQ5H9B9 411 aa16.31■□□□□ 0.2
ARHGEF1-203ENST00000354532 NSD2O96028 1365 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms