RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 DXOO77932 396 aaKnown RBP2.74□□□□□ -1.97
BRCA1-202ENST00000354071 TMEM259Q4ZIN3 620 aa2.74□□□□□ -1.97
BRCA1-202ENST00000354071 SCUBE3Q8IX30 993 aa2.74□□□□□ -1.97
BRCA1-202ENST00000354071 C4orf48Q5BLP8 95 aa2.74□□□□□ -1.97
BRCA1-202ENST00000354071 NOM1Q5C9Z4 860 aaKnown RBP2.74□□□□□ -1.97
BRCA1-202ENST00000354071 DESI1Q6ICB0 168 aa2.74□□□□□ -1.97
BRCA1-202ENST00000354071 SH3RF1Q7Z6J0 888 aa2.74□□□□□ -1.97
BRCA1-202ENST00000354071 RBM46Q8TBY0 533 aaKnown RBP2.74□□□□□ -1.97
BRCA1-202ENST00000354071 WNT2BQ93097 391 aa2.74□□□□□ -1.97
BRCA1-202ENST00000354071 SLAIN2Q9P270 581 aa2.74□□□□□ -1.97
BRCA1-202ENST00000354071 TBC1D9Q6ZT07 1266 aa2.74□□□□□ -1.97
BRCA1-202ENST00000354071 STK32AQ8WU08 396 aa2.74□□□□□ -1.97
BRCA1-202ENST00000354071 CFHP08603 1231 aa2.74□□□□□ -1.97
BRCA1-202ENST00000354071 MRPL50Q8N5N7 158 aaKnown RBP2.74□□□□□ -1.97
BRCA1-202ENST00000354071 NUTM1Q86Y26 1132 aa2.73□□□□□ -1.97
BRCA1-202ENST00000354071 PUS10Q3MIT2 529 aaKnown RBP2.73□□□□□ -1.97
BRCA1-202ENST00000354071 PRPF38BQ5VTL8 546 aaKnown RBP2.73□□□□□ -1.97
BRCA1-202ENST00000354071 RDH13Q8NBN7 331 aa2.73□□□□□ -1.97
BRCA1-202ENST00000354071 HECW2Q9P2P5 1572 aa2.73□□□□□ -1.97
BRCA1-202ENST00000354071 ZPR1O75312 459 aa2.73□□□□□ -1.97
BRCA1-202ENST00000354071 NR6A1Q15406 480 aa2.73□□□□□ -1.97
BRCA1-202ENST00000354071 PHLDB3Q6NSJ2 640 aa2.73□□□□□ -1.97
BRCA1-202ENST00000354071 NYAP1Q6ZVC0 841 aa2.73□□□□□ -1.97
BRCA1-202ENST00000354071 ALG2Q9H553 416 aa2.73□□□□□ -1.97
BRCA1-202ENST00000354071 ZMIZ1Q9ULJ6 1067 aa2.73□□□□□ -1.97
BRCA1-202ENST00000354071 DEPDC4Q8N2C3 294 aa2.72□□□□□ -1.97
BRCA1-202ENST00000354071 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.72□□□□□ -1.97
BRCA1-202ENST00000354071 PPP1R15AO75807 674 aaPredicted RBP2.72□□□□□ -1.97
BRCA1-202ENST00000354071 KCTD12Q96CX2 325 aaKnown RBP2.72□□□□□ -1.97
BRCA1-202ENST00000354071 HPS5Q9UPZ3 1129 aa2.72□□□□□ -1.97
BRCA1-202ENST00000354071 UNC13AQ9UPW8 1703 aa2.72□□□□□ -1.97
BRCA1-202ENST00000354071 KDM4AO75164 1064 aa2.72□□□□□ -1.97
BRCA1-202ENST00000354071 LGR5O75473 907 aa2.72□□□□□ -1.97
BRCA1-202ENST00000354071 BRD1O95696 1058 aa2.72□□□□□ -1.97
BRCA1-202ENST00000354071 MAFBQ9Y5Q3 323 aaPredicted RBP2.72□□□□□ -1.97
BRCA1-202ENST00000354071 ACIN1Q9UKV3 1341 aaKnown RBP2.72□□□□□ -1.97
BRCA1-202ENST00000354071 CCDC27Q2M243 656 aa2.72□□□□□ -1.97
BRCA1-202ENST00000354071 KLF16Q9BXK1 252 aaPredicted RBP2.72□□□□□ -1.97
BRCA1-202ENST00000354071 NBPF3Q9H094 633 aa2.72□□□□□ -1.97
BRCA1-202ENST00000354071 PKD2L1Q9P0L9 805 aa2.72□□□□□ -1.97
BRCA1-202ENST00000354071 NDUFB9Q9Y6M9 179 aa2.72□□□□□ -1.97
BRCA1-202ENST00000354071 A0A0G2JS52 829 aa2.71□□□□□ -1.98
BRCA1-202ENST00000354071 FDX1P10109 184 aa2.71□□□□□ -1.98
BRCA1-202ENST00000354071 SKOR1P84550 965 aa2.71□□□□□ -1.98
BRCA1-202ENST00000354071 TMEM164Q5U3C3 297 aa2.71□□□□□ -1.98
BRCA1-202ENST00000354071 TAGLNQ01995 201 aaKnown RBP2.71□□□□□ -1.98
BRCA1-202ENST00000354071 SIAH2O43255 324 aa2.71□□□□□ -1.98
BRCA1-202ENST00000354071 DKK1O94907 266 aa2.71□□□□□ -1.98
BRCA1-202ENST00000354071 CSB-PGBD3P0DP91 1061 aa2.71□□□□□ -1.98
BRCA1-202ENST00000354071 LCE2CQ5TA81 110 aa2.71□□□□□ -1.98
BRCA1-202ENST00000354071 SND1Q7KZF4 910 aaKnown RBP eCLIP2.71□□□□□ -1.98
BRCA1-202ENST00000354071 LRCH3Q96II8 777 aa2.71□□□□□ -1.98
BRCA1-202ENST00000354071 KIAA1522Q9P206 1035 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-202ENST00000354071 CHIC2Q9UKJ5 165 aa2.71□□□□□ -1.98
BRCA1-202ENST00000354071 ZFHX3Q15911 3703 aa2.7□□□□□ -1.98
BRCA1-202ENST00000354071 VRTNQ9H8Y1 702 aa2.7□□□□□ -1.98
BRCA1-202ENST00000354071 E9PSI1 815 aa2.7□□□□□ -1.98
BRCA1-202ENST00000354071 ATP6V1AP38606 617 aa2.7□□□□□ -1.98
BRCA1-202ENST00000354071 SERPINB4P48594 390 aa2.7□□□□□ -1.98
BRCA1-202ENST00000354071 LYPD8Q6UX82 237 aa2.7□□□□□ -1.98
BRCA1-202ENST00000354071 GAS2L2Q8NHY3 880 aa2.7□□□□□ -1.98
BRCA1-202ENST00000354071 RNF223E7ERA6 249 aa2.7□□□□□ -1.98
BRCA1-202ENST00000354071 PPP1R18Q6NYC8 613 aa2.7□□□□□ -1.98
BRCA1-202ENST00000354071 LIAT1Q6ZQX7 453 aa2.7□□□□□ -1.98
BRCA1-202ENST00000354071 SLF2Q8IX21 1173 aa2.7□□□□□ -1.98
BRCA1-202ENST00000354071 ZBTB3Q9H5J0 574 aa2.7□□□□□ -1.98
BRCA1-202ENST00000354071 CRTC2Q53ET0 693 aaPredicted RBP2.7□□□□□ -1.98
BRCA1-202ENST00000354071 KANK4Q5T7N3 995 aaPredicted RBP2.7□□□□□ -1.98
BRCA1-202ENST00000354071 LCE2AQ5TA79 106 aaPredicted RBP2.7□□□□□ -1.98
BRCA1-202ENST00000354071 SH3BP5LQ7L8J4 393 aa2.7□□□□□ -1.98
BRCA1-202ENST00000354071 FAM174AQ8TBP5 190 aa2.7□□□□□ -1.98
BRCA1-202ENST00000354071 USP35Q9P2H5 1018 aa2.7□□□□□ -1.98
BRCA1-202ENST00000354071 C6orf229H3BNL8 230 aa2.69□□□□□ -1.98
BRCA1-202ENST00000354071 KCNA1Q09470 495 aa2.69□□□□□ -1.98
BRCA1-202ENST00000354071 HCSTQ9UBK5 93 aa2.69□□□□□ -1.98
BRCA1-202ENST00000354071 KCNH2Q12809 1159 aa2.69□□□□□ -1.98
BRCA1-202ENST00000354071 TXNDC2Q86VQ3 553 aa2.69□□□□□ -1.98
BRCA1-202ENST00000354071 USTQ9Y2C2 406 aa2.69□□□□□ -1.98
BRCA1-202ENST00000354071 GDF9O60383 454 aa2.69□□□□□ -1.98
BRCA1-202ENST00000354071 FBXO45P0C2W1 286 aa2.69□□□□□ -1.98
BRCA1-202ENST00000354071 MTMR2Q13614 643 aa2.69□□□□□ -1.98
BRCA1-202ENST00000354071 DIXDC1Q155Q3 683 aa2.69□□□□□ -1.98
BRCA1-202ENST00000354071 TSGA10IPQ3SY00 556 aa2.69□□□□□ -1.98
BRCA1-202ENST00000354071 KDF1Q8NAX2 398 aaPredicted RBP2.68□□□□□ -1.98
BRCA1-202ENST00000354071 C1QTNF2Q9BXJ5 285 aa2.68□□□□□ -1.98
BRCA1-202ENST00000354071 SULF1Q8IWU6 871 aa2.68□□□□□ -1.98
BRCA1-202ENST00000354071 PPEF1O14829 653 aaPredicted RBP2.68□□□□□ -1.98
BRCA1-202ENST00000354071 DNAJC14Q6Y2X3 702 aaPredicted RBP2.68□□□□□ -1.98
BRCA1-202ENST00000354071 ANKK1Q8NFD2 765 aa2.68□□□□□ -1.98
BRCA1-202ENST00000354071 ATG7O95352 703 aa2.68□□□□□ -1.98
BRCA1-202ENST00000354071 USP46P62068 366 aa2.68□□□□□ -1.98
BRCA1-202ENST00000354071 EVA1BQ9NVM1 165 aa2.68□□□□□ -1.98
BRCA1-202ENST00000354071 MAP10Q9P2G4 905 aa2.68□□□□□ -1.98
BRCA1-202ENST00000354071 RNF40O75150 1001 aa2.67□□□□□ -1.98
BRCA1-202ENST00000354071 S1PR4O95977 384 aa2.67□□□□□ -1.98
BRCA1-202ENST00000354071 FAM69CQ0P6D2 419 aa2.67□□□□□ -1.98
BRCA1-202ENST00000354071 CAPN12Q6ZSI9 719 aa2.67□□□□□ -1.98
BRCA1-202ENST00000354071 RETREG3Q86VR2 466 aa2.67□□□□□ -1.98
BRCA1-202ENST00000354071 WWC1Q8IX03 1113 aa2.67□□□□□ -1.98
BRCA1-202ENST00000354071 ZNF295-AS1Q8N0V1 137 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms