RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 PER1O15534 1290 aaPredicted RBP17.41■□□□□ 0.38
SPPL3-201ENST00000353487 ROCK1Q13464 1354 aa17.41■□□□□ 0.38
SPPL3-201ENST00000353487 SYNJ2O15056 1496 aa17.4■□□□□ 0.38
SPPL3-201ENST00000353487 CERS3Q8IU89 383 aa17.4■□□□□ 0.38
SPPL3-201ENST00000353487 PARD3Q8TEW0 1356 aa17.4■□□□□ 0.38
SPPL3-201ENST00000353487 TULP1O00294 542 aaPredicted RBP17.4■□□□□ 0.38
SPPL3-201ENST00000353487 TMEM132EQ6IEE7 984 aa17.4■□□□□ 0.38
SPPL3-201ENST00000353487 SASS6Q6UVJ0 657 aa17.4■□□□□ 0.38
SPPL3-201ENST00000353487 HMOX1P09601 288 aa17.39■□□□□ 0.37
SPPL3-201ENST00000353487 TPD52L1Q16890 204 aaPredicted RBP17.39■□□□□ 0.37
SPPL3-201ENST00000353487 CCDC27Q2M243 656 aa17.39■□□□□ 0.37
SPPL3-201ENST00000353487 BAG4O95429 457 aaKnown RBP17.39■□□□□ 0.37
SPPL3-201ENST00000353487 ZNF830Q96NB3 372 aaPredicted RBP17.39■□□□□ 0.37
SPPL3-201ENST00000353487 SSH1Q8WYL5 1049 aa17.38■□□□□ 0.37
SPPL3-201ENST00000353487 TSPY26PQ9H489 355 aa17.38■□□□□ 0.37
SPPL3-201ENST00000353487 REC8O95072 547 aa17.38■□□□□ 0.37
SPPL3-201ENST00000353487 HSP90AB3PQ58FF7 597 aa17.38■□□□□ 0.37
SPPL3-201ENST00000353487 GAS2L3Q86XJ1 694 aa17.38■□□□□ 0.37
SPPL3-201ENST00000353487 KIF16BQ96L93 1317 aa17.38■□□□□ 0.37
SPPL3-201ENST00000353487 INTS3Q68E01 1043 aaKnown RBP17.37■□□□□ 0.37
SPPL3-201ENST00000353487 BECN2A8MW95 431 aa17.37■□□□□ 0.37
SPPL3-201ENST00000353487 PBRM1Q86U86 1689 aa17.37■□□□□ 0.37
SPPL3-201ENST00000353487 TCOF1Q13428 1488 aaKnown RBP17.37■□□□□ 0.37
SPPL3-201ENST00000353487 GOLGA6L19H0YKK7 550 aa17.37■□□□□ 0.37
SPPL3-201ENST00000353487 NOM1Q5C9Z4 860 aaKnown RBP17.37■□□□□ 0.37
SPPL3-201ENST00000353487 GDPD2Q9HCC8 539 aa17.37■□□□□ 0.37
SPPL3-201ENST00000353487 AEBP2Q6ZN18 517 aaPredicted RBP17.36■□□□□ 0.37
SPPL3-201ENST00000353487 HAP1P54257 671 aaPredicted RBP17.36■□□□□ 0.37
SPPL3-201ENST00000353487 RABEP1Q15276 862 aa17.36■□□□□ 0.37
SPPL3-201ENST00000353487 TAF3Q5VWG9 929 aa17.36■□□□□ 0.37
SPPL3-201ENST00000353487 TOMM22Q9NS69 142 aa17.36■□□□□ 0.37
SPPL3-201ENST00000353487 GTF2F1P35269 517 aaKnown RBP eCLIP17.36■□□□□ 0.371e-6■■■■■ 31.1
SPPL3-201ENST00000353487 KIAA0556O60303 1618 aa17.35■□□□□ 0.37
SPPL3-201ENST00000353487 MAGI1Q96QZ7 1491 aaPredicted RBP17.35■□□□□ 0.37
SPPL3-201ENST00000353487 TRIM27P14373 513 aa17.35■□□□□ 0.37
SPPL3-201ENST00000353487 ATP10BO94823 1461 aa17.35■□□□□ 0.37
SPPL3-201ENST00000353487 FIBPO43427 364 aa17.34■□□□□ 0.37
SPPL3-201ENST00000353487 RAPGEF6Q8TEU7 1601 aa17.34■□□□□ 0.37
SPPL3-201ENST00000353487 OFD1O75665 1012 aa17.34■□□□□ 0.37
SPPL3-201ENST00000353487 TSC1Q92574 1164 aa17.34■□□□□ 0.37
SPPL3-201ENST00000353487 MNS1Q8NEH6 495 aa17.33■□□□□ 0.37
SPPL3-201ENST00000353487 VPS37CA5D8V6 355 aaPredicted RBP17.33■□□□□ 0.36
SPPL3-201ENST00000353487 PRIM1P49642 420 aaKnown RBP17.33■□□□□ 0.36
SPPL3-201ENST00000353487 ZSCAN23Q3MJ62 389 aa17.33■□□□□ 0.36
SPPL3-201ENST00000353487 GAS2L2Q8NHY3 880 aa17.33■□□□□ 0.36
SPPL3-201ENST00000353487 ZBTB9Q96C00 473 aa17.33■□□□□ 0.36
SPPL3-201ENST00000353487 LRRIQ1Q96JM4 1722 aa17.33■□□□□ 0.36
SPPL3-201ENST00000353487 CREBRFQ8IUR6 639 aa17.33■□□□□ 0.36
SPPL3-201ENST00000353487 EIF4G3O43432 1585 aaKnown RBP17.33■□□□□ 0.36
SPPL3-201ENST00000353487 SPATA31E1Q6ZUB1 1445 aa17.33■□□□□ 0.36
SPPL3-201ENST00000353487 CCDC112Q8NEF3 446 aa17.32■□□□□ 0.36
SPPL3-201ENST00000353487 TRIM34Q9BYJ4 488 aa17.32■□□□□ 0.36
SPPL3-201ENST00000353487 MBD3O95983 291 aa17.32■□□□□ 0.36
SPPL3-201ENST00000353487 CALRP27797 417 aaKnown RBP17.32■□□□□ 0.36
SPPL3-201ENST00000353487 DENND4BO75064 1496 aaPredicted RBP17.32■□□□□ 0.36
SPPL3-201ENST00000353487 DYNC1I1O14576 645 aa17.32■□□□□ 0.36
SPPL3-201ENST00000353487 POLR3GO15318 223 aaPredicted RBP17.32■□□□□ 0.36
SPPL3-201ENST00000353487 HMMRO75330 724 aa17.32■□□□□ 0.36
SPPL3-201ENST00000353487 KLHL40Q2TBA0 621 aa17.32■□□□□ 0.36
SPPL3-201ENST00000353487 USP25Q9UHP3 1055 aa17.32■□□□□ 0.36
SPPL3-201ENST00000353487 ERBB4Q15303 1308 aa17.31■□□□□ 0.36
SPPL3-201ENST00000353487 H0YHG0 523 aa17.31■□□□□ 0.36
SPPL3-201ENST00000353487 HDGFL2Q7Z4V5 671 aaPredicted RBP17.31■□□□□ 0.36
SPPL3-201ENST00000353487 WDR63Q8IWG1 891 aa17.31■□□□□ 0.36
SPPL3-201ENST00000353487 NECTIN2Q92692 538 aa17.31■□□□□ 0.36
SPPL3-201ENST00000353487 CABP2Q9NPB3 220 aa17.31■□□□□ 0.36
SPPL3-201ENST00000353487 THUMPD2Q9BTF0 503 aaKnown RBP17.31■□□□□ 0.36
SPPL3-201ENST00000353487 HSP90B1P14625 803 aaKnown RBP17.31■□□□□ 0.36
SPPL3-201ENST00000353487 MLECQ14165 292 aa17.31■□□□□ 0.36
SPPL3-201ENST00000353487 TBC1D9Q6ZT07 1266 aa17.31■□□□□ 0.36
SPPL3-201ENST00000353487 TRIM5Q9C035 493 aa17.31■□□□□ 0.36
SPPL3-201ENST00000353487 DIAPH1O60610 1272 aaKnown RBP17.3■□□□□ 0.36
SPPL3-201ENST00000353487 ARHGAP5Q13017 1502 aa17.3■□□□□ 0.36
SPPL3-201ENST00000353487 DEF6Q9H4E7 631 aa17.3■□□□□ 0.36
SPPL3-201ENST00000353487 CWC15Q9P013 229 aaKnown RBP17.3■□□□□ 0.36
SPPL3-201ENST00000353487 C14orf37Q86TY3 774 aa17.3■□□□□ 0.36
SPPL3-201ENST00000353487 NINLQ9Y2I6 1382 aa17.29■□□□□ 0.36
SPPL3-201ENST00000353487 TMX1Q9H3N1 280 aa17.29■□□□□ 0.36
SPPL3-201ENST00000353487 PLEKHH2Q8IVE3 1493 aa17.29■□□□□ 0.36
SPPL3-201ENST00000353487 SMAP1Q8IYB5 467 aaPredicted RBP17.29■□□□□ 0.36
SPPL3-201ENST00000353487 TIGD1Q96MW7 591 aa17.29■□□□□ 0.36
SPPL3-201ENST00000353487 TESK2Q96S53 571 aa17.28■□□□□ 0.36
SPPL3-201ENST00000353487 ANTXR1Q9H6X2 564 aa17.28■□□□□ 0.36
SPPL3-201ENST00000353487 FSD2A1L4K1 749 aa17.28■□□□□ 0.36
SPPL3-201ENST00000353487 MINK1Q8N4C8 1332 aaPredicted RBP17.28■□□□□ 0.36
SPPL3-201ENST00000353487 RTF1Q92541 710 aaKnown RBP17.28■□□□□ 0.36
SPPL3-201ENST00000353487 UPF3BQ9BZI7 483 aaKnown RBP17.28■□□□□ 0.36
SPPL3-201ENST00000353487 ARGLU1Q9NWB6 273 aaPredicted RBP17.28■□□□□ 0.36
SPPL3-201ENST00000353487 KIF14Q15058 1648 aa17.27■□□□□ 0.36
SPPL3-201ENST00000353487 PZPP20742 1482 aa17.27■□□□□ 0.36
SPPL3-201ENST00000353487 RAB3GAP1Q15042 981 aa17.27■□□□□ 0.36
SPPL3-201ENST00000353487 SMARCA5O60264 1052 aaPredicted RBP17.27■□□□□ 0.35
SPPL3-201ENST00000353487 CALCOCO1Q9P1Z2 691 aa17.27■□□□□ 0.35
SPPL3-201ENST00000353487 LETM1O95202 739 aaPredicted RBP17.26■□□□□ 0.35
SPPL3-201ENST00000353487 GCC1Q96CN9 775 aa17.26■□□□□ 0.35
SPPL3-201ENST00000353487 RBSNQ9H1K0 784 aa17.26■□□□□ 0.35
SPPL3-201ENST00000353487 TEX14Q8IWB6 1497 aa17.26■□□□□ 0.35
SPPL3-201ENST00000353487 TTC12Q9H892 705 aaPredicted RBP17.26■□□□□ 0.35
SPPL3-201ENST00000353487 TERF2IPQ9NYB0 399 aa17.26■□□□□ 0.35
SPPL3-201ENST00000353487 USP19O94966 1318 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms