RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 KIAA1107Q9UPP5 1409 aa13.6□□□□□ -0.23
SLC6A20-201ENST00000353278 NBPF1Q3BBV0 1214 aa13.59□□□□□ -0.23
SLC6A20-201ENST00000353278 ERC1Q8IUD2 1116 aa13.59□□□□□ -0.23
SLC6A20-201ENST00000353278 TWISTNBQ3B726 338 aaPredicted RBP13.59□□□□□ -0.23
SLC6A20-201ENST00000353278 DNMBPQ6XZF7 1577 aa13.59□□□□□ -0.23
SLC6A20-201ENST00000353278 LNPKQ9C0E8 428 aa13.59□□□□□ -0.23
SLC6A20-201ENST00000353278 FOXD4L6Q3SYB3 417 aaPredicted RBP13.59□□□□□ -0.23
SLC6A20-201ENST00000353278 FOXD4L3Q6VB84 417 aaPredicted RBP13.59□□□□□ -0.23
SLC6A20-201ENST00000353278 IPO7O95373 1038 aaKnown RBP13.58□□□□□ -0.23
SLC6A20-201ENST00000353278 CNTROBQ8N137 903 aa13.58□□□□□ -0.23
SLC6A20-201ENST00000353278 MPHOSPH8Q99549 860 aa13.58□□□□□ -0.23
SLC6A20-201ENST00000353278 CCDC158Q5M9N0 1113 aa13.58□□□□□ -0.24
SLC6A20-201ENST00000353278 PCMTD1Q96MG8 357 aaPredicted RBP13.58□□□□□ -0.24
SLC6A20-201ENST00000353278 HECW1Q76N89 1606 aa13.58□□□□□ -0.24
SLC6A20-201ENST00000353278 IPO9Q96P70 1041 aaKnown RBP13.58□□□□□ -0.24
SLC6A20-201ENST00000353278 MTMR7Q9Y216 660 aa13.58□□□□□ -0.24
SLC6A20-201ENST00000353278 BRD4O60885 1362 aaPredicted RBP13.57□□□□□ -0.24
SLC6A20-201ENST00000353278 PPP2R1AP30153 589 aa13.57□□□□□ -0.24
SLC6A20-201ENST00000353278 ADAMTS8Q9UP79 889 aa13.57□□□□□ -0.24
SLC6A20-201ENST00000353278 SMC3Q9UQE7 1217 aa13.57□□□□□ -0.24
SLC6A20-201ENST00000353278 DDX49Q9Y6V7 483 aaKnown RBP13.57□□□□□ -0.24
SLC6A20-201ENST00000353278 NUDT16Q96DE0 195 aaKnown RBP13.57□□□□□ -0.24
SLC6A20-201ENST00000353278 BICD2Q8TD16 824 aa13.56□□□□□ -0.24
SLC6A20-201ENST00000353278 DNAJC2Q99543 621 aaKnown RBP13.56□□□□□ -0.24
SLC6A20-201ENST00000353278 ARAP1Q96P48 1450 aa13.56□□□□□ -0.24
SLC6A20-201ENST00000353278 VPS37CA5D8V6 355 aaPredicted RBP13.56□□□□□ -0.24
SLC6A20-201ENST00000353278 HIP1O00291 1037 aa13.56□□□□□ -0.24
SLC6A20-201ENST00000353278 PSMA5P28066 241 aa13.56□□□□□ -0.24
SLC6A20-201ENST00000353278 TTC39AQ5SRH9 613 aa13.55□□□□□ -0.24
SLC6A20-201ENST00000353278 NGLY1Q96IV0 654 aa13.55□□□□□ -0.24
SLC6A20-201ENST00000353278 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.55□□□□□ -0.24
SLC6A20-201ENST00000353278 DNAJC5BQ9UF47 199 aa13.55□□□□□ -0.24
SLC6A20-201ENST00000353278 STARD3NLO95772 234 aa13.55□□□□□ -0.24
SLC6A20-201ENST00000353278 GNAI2P04899 355 aa13.55□□□□□ -0.24
SLC6A20-201ENST00000353278 CCDC57Q2TAC2 916 aa13.55□□□□□ -0.24
SLC6A20-201ENST00000353278 SRCIN1Q9C0H9 1055 aa13.55□□□□□ -0.24
SLC6A20-201ENST00000353278 SLC4A2P04920 1241 aa13.54□□□□□ -0.24
SLC6A20-201ENST00000353278 PDE4AP27815 886 aa13.54□□□□□ -0.24
SLC6A20-201ENST00000353278 GOLGA6L1Q8N7Z2 621 aa13.54□□□□□ -0.24
SLC6A20-201ENST00000353278 EXOSC9Q06265 439 aaKnown RBP13.54□□□□□ -0.24
SLC6A20-201ENST00000353278 EPRSP07814 1512 aaKnown RBP13.54□□□□□ -0.24
SLC6A20-201ENST00000353278 ADAMTS2O95450 1211 aa13.54□□□□□ -0.24
SLC6A20-201ENST00000353278 SLC4A3P48751 1232 aa13.54□□□□□ -0.24
SLC6A20-201ENST00000353278 SKOR2Q2VWA4 1001 aaPredicted RBP13.54□□□□□ -0.24
SLC6A20-201ENST00000353278 PPP6R1Q9UPN7 881 aa13.54□□□□□ -0.24
SLC6A20-201ENST00000353278 RBM5P52756 815 aaKnown RBP eCLIP13.53□□□□□ -0.24
SLC6A20-201ENST00000353278 MYL6BP14649 208 aa13.53□□□□□ -0.24
SLC6A20-201ENST00000353278 CCT4P50991 539 aaKnown RBP13.53□□□□□ -0.24
SLC6A20-201ENST00000353278 PANK1Q8TE04 598 aa13.53□□□□□ -0.24
SLC6A20-201ENST00000353278 NACAP1Q9BZK3 213 aa13.53□□□□□ -0.24
SLC6A20-201ENST00000353278 ZNF652Q9Y2D9 606 aa13.53□□□□□ -0.24
SLC6A20-201ENST00000353278 SYNJ1O43426 1573 aa13.52□□□□□ -0.24
SLC6A20-201ENST00000353278 CDC45O75419 566 aa13.52□□□□□ -0.24
SLC6A20-201ENST00000353278 LAMC3Q9Y6N6 1575 aa13.52□□□□□ -0.24
SLC6A20-201ENST00000353278 CCDC73Q6ZRK6 1079 aa13.52□□□□□ -0.24
SLC6A20-201ENST00000353278 BTBD11A6QL63 1104 aa13.52□□□□□ -0.25
SLC6A20-201ENST00000353278 ADGRL1O94910 1474 aa13.52□□□□□ -0.25
SLC6A20-201ENST00000353278 ATP2B2Q01814 1243 aa13.52□□□□□ -0.25
SLC6A20-201ENST00000353278 PHF8Q9UPP1 1060 aa13.52□□□□□ -0.25
SLC6A20-201ENST00000353278 PRXQ9BXM0 1461 aa13.51□□□□□ -0.25
SLC6A20-201ENST00000353278 RRS1Q15050 365 aaKnown RBP13.51□□□□□ -0.25
SLC6A20-201ENST00000353278 WWC2Q6AWC2 1192 aa13.51□□□□□ -0.25
SLC6A20-201ENST00000353278 AKNAQ7Z591 1439 aa13.51□□□□□ -0.25
SLC6A20-201ENST00000353278 RRP12Q5JTH9 1297 aaKnown RBP13.51□□□□□ -0.25
SLC6A20-201ENST00000353278 BICDL1Q6ZP65 573 aa13.51□□□□□ -0.25
SLC6A20-201ENST00000353278 TMOD3Q9NYL9 352 aa13.51□□□□□ -0.25
SLC6A20-201ENST00000353278 TMOD2Q9NZR1 351 aa13.51□□□□□ -0.25
SLC6A20-201ENST00000353278 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.5□□□□□ -0.25
SLC6A20-201ENST00000353278 CCDC141Q6ZP82 1450 aa13.5□□□□□ -0.25
SLC6A20-201ENST00000353278 DAPK1P53355 1430 aa13.5□□□□□ -0.25
SLC6A20-201ENST00000353278 AMOTL2Q9Y2J4 779 aa13.5□□□□□ -0.25
SLC6A20-201ENST00000353278 MAGI1Q96QZ7 1491 aaPredicted RBP13.5□□□□□ -0.25
SLC6A20-201ENST00000353278 LRPPRCP42704 1394 aaKnown RBP13.5□□□□□ -0.25
SLC6A20-201ENST00000353278 ZPR1O75312 459 aa13.5□□□□□ -0.25
SLC6A20-201ENST00000353278 FOSBP53539 338 aa13.5□□□□□ -0.25
SLC6A20-201ENST00000353278 TMEM132AQ24JP5 1023 aa13.5□□□□□ -0.25
SLC6A20-201ENST00000353278 CEP126Q9P2H0 1117 aa13.5□□□□□ -0.25
SLC6A20-201ENST00000353278 CEBPAP49715 358 aaPredicted RBP13.49□□□□□ -0.25
SLC6A20-201ENST00000353278 CCDC70Q6NSX1 233 aa13.49□□□□□ -0.25
SLC6A20-201ENST00000353278 TOP2BQ02880 1626 aa13.49□□□□□ -0.25
SLC6A20-201ENST00000353278 FOXO3O43524 673 aa13.49□□□□□ -0.25
SLC6A20-201ENST00000353278 IGHMBP2P38935 993 aaKnown RBP13.49□□□□□ -0.25
SLC6A20-201ENST00000353278 ZSCAN25Q6NSZ9 544 aa13.49□□□□□ -0.25
SLC6A20-201ENST00000353278 ZSCAN29Q8IWY8 852 aaPredicted RBP13.49□□□□□ -0.25
SLC6A20-201ENST00000353278 CADPS2Q86UW7 1296 aa13.48□□□□□ -0.25
SLC6A20-201ENST00000353278 WDHD1O75717 1129 aaPredicted RBP13.47□□□□□ -0.25
SLC6A20-201ENST00000353278 FCHSD2O94868 740 aa13.47□□□□□ -0.25
SLC6A20-201ENST00000353278 NUCB2P80303 420 aa13.47□□□□□ -0.25
SLC6A20-201ENST00000353278 DENND4BO75064 1496 aaPredicted RBP13.47□□□□□ -0.25
SLC6A20-201ENST00000353278 ARHGEF11O15085 1522 aa13.47□□□□□ -0.25
SLC6A20-201ENST00000353278 CT47A1Q5JQC4 288 aaPredicted RBP13.47□□□□□ -0.25
SLC6A20-201ENST00000353278 WAPLQ7Z5K2 1190 aa13.47□□□□□ -0.25
SLC6A20-201ENST00000353278 IQGAP2Q13576 1575 aa13.47□□□□□ -0.25
SLC6A20-201ENST00000353278 ABCA10Q8WWZ4 1543 aa13.47□□□□□ -0.25
SLC6A20-201ENST00000353278 CT47B1P0C2W7 299 aaPredicted RBP13.47□□□□□ -0.25
SLC6A20-201ENST00000353278 GNAT3A8MTJ3 354 aa13.47□□□□□ -0.25
SLC6A20-201ENST00000353278 PTCD1O75127 700 aaKnown RBP13.47□□□□□ -0.25
SLC6A20-201ENST00000353278 SIL1Q9H173 461 aa13.47□□□□□ -0.25
SLC6A20-201ENST00000353278 AMOTQ4VCS5 1084 aa13.46□□□□□ -0.25
SLC6A20-201ENST00000353278 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms