RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 ASXL1Q8IXJ9 1541 aa13.16□□□□□ -0.3
PKP1-202ENST00000352845 CBX1P83916 185 aa13.15□□□□□ -0.3
PKP1-202ENST00000352845 KNSTRNQ9Y448 316 aa13.15□□□□□ -0.3
PKP1-202ENST00000352845 TEX2Q8IWB9 1127 aa13.15□□□□□ -0.31
PKP1-202ENST00000352845 DMRT2Q9Y5R5 561 aa13.15□□□□□ -0.31
PKP1-202ENST00000352845 CCDC146Q8IYE0 955 aa13.14□□□□□ -0.31
PKP1-202ENST00000352845 INO80Q9ULG1 1556 aaPredicted RBP13.14□□□□□ -0.31
PKP1-202ENST00000352845 DNAJC2Q99543 621 aaKnown RBP13.13□□□□□ -0.31
PKP1-202ENST00000352845 RIMBP3CA6NJZ7 1639 aa13.13□□□□□ -0.31
PKP1-202ENST00000352845 RIMBP3BA6NNM3 1639 aa13.13□□□□□ -0.31
PKP1-202ENST00000352845 RIMBP3Q9UFD9 1639 aa13.13□□□□□ -0.31
PKP1-202ENST00000352845 NPC1L1Q9UHC9 1359 aa13.13□□□□□ -0.31
PKP1-202ENST00000352845 ATP7AQ04656 1500 aa13.13□□□□□ -0.31
PKP1-202ENST00000352845 KIAA2012Q0VF49 1180 aa13.12□□□□□ -0.31
PKP1-202ENST00000352845 APAF1O14727 1248 aa13.12□□□□□ -0.31
PKP1-202ENST00000352845 CD109Q6YHK3 1445 aa13.12□□□□□ -0.31
PKP1-202ENST00000352845 CHRM1P11229 460 aaPredicted RBP13.11□□□□□ -0.31
PKP1-202ENST00000352845 ZNF710Q8N1W2 664 aa13.11□□□□□ -0.31
PKP1-202ENST00000352845 FEZ1Q99689 392 aa13.11□□□□□ -0.31
PKP1-202ENST00000352845 DDX49Q9Y6V7 483 aaKnown RBP13.11□□□□□ -0.31
PKP1-202ENST00000352845 VGLL3A8MV65 326 aa13.11□□□□□ -0.31
PKP1-202ENST00000352845 NGEFQ8N5V2 710 aa13.11□□□□□ -0.31
PKP1-202ENST00000352845 CGNQ9P2M7 1197 aaKnown RBP13.11□□□□□ -0.31
PKP1-202ENST00000352845 CCDC66A2RUB6 948 aa13.1□□□□□ -0.31
PKP1-202ENST00000352845 GABPB1Q06547 395 aaPredicted RBP13.1□□□□□ -0.31
PKP1-202ENST00000352845 ATP2B3Q16720 1220 aa13.09□□□□□ -0.31
PKP1-202ENST00000352845 KIF3AQ9Y496 699 aa13.09□□□□□ -0.31
PKP1-202ENST00000352845 SPHKAPQ2M3C7 1700 aa13.09□□□□□ -0.31
PKP1-202ENST00000352845 E9PSI1 815 aa13.09□□□□□ -0.31
PKP1-202ENST00000352845 RWDD1Q9H446 243 aaPredicted RBP13.09□□□□□ -0.31
PKP1-202ENST00000352845 SCAF11Q99590 1463 aaKnown RBP13.09□□□□□ -0.31
PKP1-202ENST00000352845 PDZRN3Q9UPQ7 1066 aa13.08□□□□□ -0.32
PKP1-202ENST00000352845 KIDINS220Q9ULH0 1771 aa13.08□□□□□ -0.32
PKP1-202ENST00000352845 IRX3P78415 501 aaPredicted RBP13.08□□□□□ -0.32
PKP1-202ENST00000352845 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
PKP1-202ENST00000352845 TSPYL1Q9H0U9 437 aa13.08□□□□□ -0.32
PKP1-202ENST00000352845 MFAP1P55081 439 aaKnown RBP13.07□□□□□ -0.32
PKP1-202ENST00000352845 ZNF771Q7L3S4 317 aaPredicted RBP13.07□□□□□ -0.32
PKP1-202ENST00000352845 PDCL2Q8N4E4 241 aa13.07□□□□□ -0.32
PKP1-202ENST00000352845 PANK1Q8TE04 598 aa13.07□□□□□ -0.32
PKP1-202ENST00000352845 DEPDC5O75140 1603 aa13.07□□□□□ -0.32
PKP1-202ENST00000352845 CEP152O94986 1710 aa13.06□□□□□ -0.32
PKP1-202ENST00000352845 ZNF518AQ6AHZ1 1483 aa13.06□□□□□ -0.32
PKP1-202ENST00000352845 IRX5P78411 483 aaPredicted RBP13.06□□□□□ -0.32
PKP1-202ENST00000352845 ZSCAN23Q3MJ62 389 aa13.06□□□□□ -0.32
PKP1-202ENST00000352845 RBSNQ9H1K0 784 aa13.06□□□□□ -0.32
PKP1-202ENST00000352845 CFAP74Q9C0B2 1584 aa13.06□□□□□ -0.32
PKP1-202ENST00000352845 COG6Q9Y2V7 657 aa13.05□□□□□ -0.32
PKP1-202ENST00000352845 CDCA8Q53HL2 280 aa13.05□□□□□ -0.32
PKP1-202ENST00000352845 OGFRQ9NZT2 677 aa13.05□□□□□ -0.32
PKP1-202ENST00000352845 KDM5AP29375 1690 aaKnown RBP13.05□□□□□ -0.32
PKP1-202ENST00000352845 POGZQ7Z3K3 1410 aa13.04□□□□□ -0.32
PKP1-202ENST00000352845 ZFP91Q96JP5 570 aaPredicted RBP13.04□□□□□ -0.32
PKP1-202ENST00000352845 BAG4O95429 457 aaKnown RBP13.04□□□□□ -0.32
PKP1-202ENST00000352845 BRD2P25440 801 aaKnown RBP13.04□□□□□ -0.32
PKP1-202ENST00000352845 TRPM2O94759 1503 aa13.03□□□□□ -0.32
PKP1-202ENST00000352845 FAM193AP78312 1265 aa13.03□□□□□ -0.32
PKP1-202ENST00000352845 PIBF1Q8WXW3 757 aa13.03□□□□□ -0.32
PKP1-202ENST00000352845 MROH1Q8NDA8 1641 aa13.03□□□□□ -0.32
PKP1-202ENST00000352845 CLTCL1P53675 1640 aa13.03□□□□□ -0.32
PKP1-202ENST00000352845 KIF3BO15066 747 aa13.03□□□□□ -0.32
PKP1-202ENST00000352845 TIGD1Q96MW7 591 aa13.03□□□□□ -0.32
PKP1-202ENST00000352845 PCDHB15Q9Y5E8 787 aa13.03□□□□□ -0.32
PKP1-202ENST00000352845 SHPRHQ149N8 1683 aa13.02□□□□□ -0.33
PKP1-202ENST00000352845 WWC1Q8IX03 1113 aa13.02□□□□□ -0.33
PKP1-202ENST00000352845 ANKRD7Q92527 254 aa13.02□□□□□ -0.33
PKP1-202ENST00000352845 CARD14Q9BXL6 1004 aa13.02□□□□□ -0.33
PKP1-202ENST00000352845 DIAPH3Q9NSV4 1193 aa13.02□□□□□ -0.33
PKP1-202ENST00000352845 TNNQ9UQP3 1299 aa13.02□□□□□ -0.33
PKP1-202ENST00000352845 ERVK-7P63135 1459 aa13.02□□□□□ -0.33
PKP1-202ENST00000352845 KCNJ4P48050 445 aa13.01□□□□□ -0.33
PKP1-202ENST00000352845 RGS22Q8NE09 1264 aa13.01□□□□□ -0.33
PKP1-202ENST00000352845 BCL2L12Q9HB09 334 aa13.01□□□□□ -0.33
PKP1-202ENST00000352845 VWDEQ8N2E2 1590 aa13.01□□□□□ -0.33
PKP1-202ENST00000352845 MAP3K4Q9Y6R4 1608 aa13.01□□□□□ -0.33
PKP1-202ENST00000352845 K7ELQ4 463 aaPredicted RBP13.01□□□□□ -0.33
PKP1-202ENST00000352845 PTMAP06454 111 aaKnown RBP13.01□□□□□ -0.33
PKP1-202ENST00000352845 RLBP1P12271 317 aa13.01□□□□□ -0.33
PKP1-202ENST00000352845 NUCB2P80303 420 aa13.01□□□□□ -0.33
PKP1-202ENST00000352845 CAVIN1Q6NZI2 390 aaKnown RBP13.01□□□□□ -0.33
PKP1-202ENST00000352845 LRSAM1Q6UWE0 723 aa13.01□□□□□ -0.33
PKP1-202ENST00000352845 CREBRFQ8IUR6 639 aa13.01□□□□□ -0.33
PKP1-202ENST00000352845 PTPRTO14522 1441 aa13.01□□□□□ -0.33
PKP1-202ENST00000352845 KIAA1210Q9ULL0 1709 aa13.01□□□□□ -0.33
PKP1-202ENST00000352845 KLHL34Q8N239 644 aa13□□□□□ -0.33
PKP1-202ENST00000352845 TET3O43151 1660 aa13□□□□□ -0.33
PKP1-202ENST00000352845 HECW2Q9P2P5 1572 aa13□□□□□ -0.33
PKP1-202ENST00000352845 RAPGEF3O95398 923 aa13□□□□□ -0.33
PKP1-202ENST00000352845 PRIM1P49642 420 aaKnown RBP13□□□□□ -0.33
PKP1-202ENST00000352845 CALCOCO1Q9P1Z2 691 aa13□□□□□ -0.33
PKP1-202ENST00000352845 IQSEC2Q5JU85 1478 aa12.99□□□□□ -0.33
PKP1-202ENST00000352845 NEO1Q92859 1461 aa12.99□□□□□ -0.33
PKP1-202ENST00000352845 POLR3AO14802 1390 aaPredicted RBP12.99□□□□□ -0.33
PKP1-202ENST00000352845 SSFA2P28290 1259 aa12.99□□□□□ -0.33
PKP1-202ENST00000352845 RARSP54136 660 aaKnown RBP12.99□□□□□ -0.33
PKP1-202ENST00000352845 FAM69CQ0P6D2 419 aa12.99□□□□□ -0.33
PKP1-202ENST00000352845 NOLC1Q14978 699 aaKnown RBP eCLIP12.99□□□□□ -0.33
PKP1-202ENST00000352845 SPTLC3Q9NUV7 552 aa12.99□□□□□ -0.33
PKP1-202ENST00000352845 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.99□□□□□ -0.33
PKP1-202ENST00000352845 FRMPD1Q5SYB0 1578 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms