RNA–Protein interactions for RNA: ENST00000350061.9

CACNA1D-202, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1D, Length 7,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-202ENST00000350061 CHD1LQ86WJ1 897 aa11.11□□□□□ -0.63
CACNA1D-202ENST00000350061 R3HCC1Q9Y3T6 440 aaKnown RBP11.11□□□□□ -0.63
CACNA1D-202ENST00000350061 CDC45O75419 566 aa11.1□□□□□ -0.63
CACNA1D-202ENST00000350061 MORC1Q86VD1 984 aa11.1□□□□□ -0.63
CACNA1D-202ENST00000350061 ZBTB7BO15156 539 aaPredicted RBP11.1□□□□□ -0.63
CACNA1D-202ENST00000350061 KIAA1524Q8TCG1 905 aa11.1□□□□□ -0.63
CACNA1D-202ENST00000350061 SLC12A5Q9H2X9 1139 aa11.1□□□□□ -0.63
CACNA1D-202ENST00000350061 PRIM1P49642 420 aaKnown RBP11.1□□□□□ -0.63
CACNA1D-202ENST00000350061 FKBP5Q13451 457 aaPredicted RBP11.1□□□□□ -0.63
CACNA1D-202ENST00000350061 NEUROD2Q15784 382 aa11.1□□□□□ -0.63
CACNA1D-202ENST00000350061 SMC4Q9NTJ3 1288 aa11.09□□□□□ -0.63
CACNA1D-202ENST00000350061 INTS4Q96HW7 963 aaKnown RBP11.09□□□□□ -0.63
CACNA1D-202ENST00000350061 DNAJC5BQ9UF47 199 aa11.09□□□□□ -0.63
CACNA1D-202ENST00000350061 U2AF1L5P0DN76 240 aaPredicted RBP11.09□□□□□ -0.63
CACNA1D-202ENST00000350061 U2AF1Q01081 240 aaKnown RBP eCLIP11.09□□□□□ -0.63
CACNA1D-202ENST00000350061 RPAP2Q8IXW5 612 aaPredicted RBP11.09□□□□□ -0.63
CACNA1D-202ENST00000350061 ARXQ96QS3 562 aa11.09□□□□□ -0.63
CACNA1D-202ENST00000350061 FAM193AP78312 1265 aa11.09□□□□□ -0.63
CACNA1D-202ENST00000350061 TBC1D9Q6ZT07 1266 aa11.09□□□□□ -0.63
CACNA1D-202ENST00000350061 GTPBP4Q9BZE4 634 aaKnown RBP11.09□□□□□ -0.63
CACNA1D-202ENST00000350061 SPTLC3Q9NUV7 552 aa11.09□□□□□ -0.63
CACNA1D-202ENST00000350061 LRSAM1Q6UWE0 723 aa11.09□□□□□ -0.63
CACNA1D-202ENST00000350061 FTSJ3Q8IY81 847 aaKnown RBP11.08□□□□□ -0.64
CACNA1D-202ENST00000350061 PNPLA6Q8IY17 1366 aa11.08□□□□□ -0.64
CACNA1D-202ENST00000350061 TMEM57Q8N5G2 664 aa11.08□□□□□ -0.64
CACNA1D-202ENST00000350061 UVSSAQ2YD98 709 aa11.08□□□□□ -0.64
CACNA1D-202ENST00000350061 SIRT2Q8IXJ6 389 aa11.08□□□□□ -0.64
CACNA1D-202ENST00000350061 HAP1P54257 671 aaPredicted RBP11.08□□□□□ -0.64
CACNA1D-202ENST00000350061 FEZ1Q99689 392 aa11.08□□□□□ -0.64
CACNA1D-202ENST00000350061 OSBPL3Q9H4L5 887 aa11.07□□□□□ -0.64
CACNA1D-202ENST00000350061 LAMC3Q9Y6N6 1575 aa11.07□□□□□ -0.64
CACNA1D-202ENST00000350061 DMTNQ08495 405 aa11.07□□□□□ -0.64
CACNA1D-202ENST00000350061 MYOM2P54296 1465 aa11.07□□□□□ -0.64
CACNA1D-202ENST00000350061 ZNF853P0CG23 659 aa11.07□□□□□ -0.64
CACNA1D-202ENST00000350061 TMPOP42166 694 aaKnown RBP11.06□□□□□ -0.64
CACNA1D-202ENST00000350061 C14orf93Q9H972 538 aaKnown RBP11.06□□□□□ -0.64
CACNA1D-202ENST00000350061 MCM2P49736 904 aa11.06□□□□□ -0.64
CACNA1D-202ENST00000350061 CCDC39Q9UFE4 941 aa11.06□□□□□ -0.64
CACNA1D-202ENST00000350061 TRIM35Q9UPQ4 493 aa11.06□□□□□ -0.64
CACNA1D-202ENST00000350061 API5Q9BZZ5 524 aaKnown RBP11.06□□□□□ -0.64
CACNA1D-202ENST00000350061 TRAPPC8Q9Y2L5 1435 aa11.06□□□□□ -0.64
CACNA1D-202ENST00000350061 CAVIN1Q6NZI2 390 aaKnown RBP11.06□□□□□ -0.64
CACNA1D-202ENST00000350061 RRP7AQ9Y3A4 280 aaKnown RBP11.06□□□□□ -0.64
CACNA1D-202ENST00000350061 LAMC1P11047 1609 aa11.06□□□□□ -0.64
CACNA1D-202ENST00000350061 ARHGEF5Q12774 1597 aa11.06□□□□□ -0.64
CACNA1D-202ENST00000350061 VAMP4O75379 141 aa11.05□□□□□ -0.64
CACNA1D-202ENST00000350061 MED14O60244 1454 aa11.05□□□□□ -0.64
CACNA1D-202ENST00000350061 ZSCAN23Q3MJ62 389 aa11.05□□□□□ -0.64
CACNA1D-202ENST00000350061 ABCC4O15439 1325 aa11.05□□□□□ -0.64
CACNA1D-202ENST00000350061 SLC20A2Q08357 652 aa11.05□□□□□ -0.64
CACNA1D-202ENST00000350061 ZNF710Q8N1W2 664 aa11.05□□□□□ -0.64
CACNA1D-202ENST00000350061 CTIFO43310 598 aaKnown RBP11.05□□□□□ -0.64
CACNA1D-202ENST00000350061 ADGRF5Q8IZF2 1346 aa11.05□□□□□ -0.64
CACNA1D-202ENST00000350061 ASXL2Q76L83 1435 aa11.05□□□□□ -0.64
CACNA1D-202ENST00000350061 IQSEC2Q5JU85 1478 aa11.05□□□□□ -0.64
CACNA1D-202ENST00000350061 RTL1A6NKG5 1358 aa11.04□□□□□ -0.64
CACNA1D-202ENST00000350061 REC8O95072 547 aa11.04□□□□□ -0.64
CACNA1D-202ENST00000350061 ANAPC15P60006 121 aa11.04□□□□□ -0.64
CACNA1D-202ENST00000350061 USP26Q9BXU7 913 aa11.04□□□□□ -0.64
CACNA1D-202ENST00000350061 SPRYD3Q8NCJ5 442 aa11.04□□□□□ -0.64
CACNA1D-202ENST00000350061 CD109Q6YHK3 1445 aa11.04□□□□□ -0.64
CACNA1D-202ENST00000350061 FCHSD2O94868 740 aa11.04□□□□□ -0.64
CACNA1D-202ENST00000350061 TSR2Q969E8 191 aaKnown RBP11.04□□□□□ -0.64
CACNA1D-202ENST00000350061 FGD1P98174 961 aa11.03□□□□□ -0.64
CACNA1D-202ENST00000350061 UQCRHLA0A096LP55 91 aa11.03□□□□□ -0.64
CACNA1D-202ENST00000350061 UQCRHP07919 91 aa11.03□□□□□ -0.64
CACNA1D-202ENST00000350061 SYCP1Q15431 976 aa11.03□□□□□ -0.64
CACNA1D-202ENST00000350061 TMEM87AQ8NBN3 555 aa11.03□□□□□ -0.64
CACNA1D-202ENST00000350061 PLXNC1O60486 1568 aa11.03□□□□□ -0.64
CACNA1D-202ENST00000350061 GABPB1Q06547 395 aaPredicted RBP11.03□□□□□ -0.64
CACNA1D-202ENST00000350061 KIAA0556O60303 1618 aa11.03□□□□□ -0.64
CACNA1D-202ENST00000350061 ZNF518AQ6AHZ1 1483 aa11.03□□□□□ -0.64
CACNA1D-202ENST00000350061 UNC13AQ9UPW8 1703 aa11.03□□□□□ -0.64
CACNA1D-202ENST00000350061 PDCL2Q8N4E4 241 aa11.03□□□□□ -0.64
CACNA1D-202ENST00000350061 ITPRIPQ8IWB1 547 aa11.02□□□□□ -0.64
CACNA1D-202ENST00000350061 ANKRD44Q8N8A2 993 aa11.02□□□□□ -0.64
CACNA1D-202ENST00000350061 PKP1Q13835 747 aa11.02□□□□□ -0.64
CACNA1D-202ENST00000350061 PLEKHM2Q8IWE5 1019 aa11.02□□□□□ -0.65
CACNA1D-202ENST00000350061 NOLC1Q14978 699 aaKnown RBP eCLIP11.02□□□□□ -0.65
CACNA1D-202ENST00000350061 PLEKHF1Q96S99 279 aa11.02□□□□□ -0.65
CACNA1D-202ENST00000350061 ADAMTS12P58397 1594 aa11.02□□□□□ -0.65
CACNA1D-202ENST00000350061 LETM1O95202 739 aaPredicted RBP11.02□□□□□ -0.65
CACNA1D-202ENST00000350061 KIF3AQ9Y496 699 aa11.02□□□□□ -0.65
CACNA1D-202ENST00000350061 CASC1Q6TDU7 716 aa11.02□□□□□ -0.65
CACNA1D-202ENST00000350061 SPAG9O60271 1321 aaKnown RBP11.01□□□□□ -0.65
CACNA1D-202ENST00000350061 KIF24Q5T7B8 1368 aa11.01□□□□□ -0.65
CACNA1D-202ENST00000350061 RPGRIP1LQ68CZ1 1315 aa11.01□□□□□ -0.65
CACNA1D-202ENST00000350061 ANKRD36BQ8N2N9 1353 aa11.01□□□□□ -0.65
CACNA1D-202ENST00000350061 KIAA2012Q0VF49 1180 aa11□□□□□ -0.65
CACNA1D-202ENST00000350061 INTS3Q68E01 1043 aaKnown RBP11□□□□□ -0.65
CACNA1D-202ENST00000350061 GSPT1P15170 499 aaKnown RBP11□□□□□ -0.65
CACNA1D-202ENST00000350061 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11□□□□□ -0.65
CACNA1D-202ENST00000350061 GPT2Q8TD30 523 aa11□□□□□ -0.65
CACNA1D-202ENST00000350061 E9PCH4 1651 aa11□□□□□ -0.65
CACNA1D-202ENST00000350061 ST18O60284 1047 aa11□□□□□ -0.65
CACNA1D-202ENST00000350061 PRPF40AO75400 957 aaKnown RBP11□□□□□ -0.65
CACNA1D-202ENST00000350061 ANKRD7Q92527 254 aa11□□□□□ -0.65
CACNA1D-202ENST00000350061 FUCA2Q9BTY2 467 aa10.99□□□□□ -0.65
CACNA1D-202ENST00000350061 USP25Q9UHP3 1055 aa10.99□□□□□ -0.65
CACNA1D-202ENST00000350061 NSD3Q9BZ95 1437 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms