RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 GPR37L1O60883 481 aa12.11□□□□□ -0.47
UBE2D3-204ENST00000349311 NR6A1Q15406 480 aa12.11□□□□□ -0.47
UBE2D3-204ENST00000349311 PCGF6Q9BYE7 350 aa12.11□□□□□ -0.47
UBE2D3-204ENST00000349311 GTF3C3Q9Y5Q9 886 aa12.11□□□□□ -0.47
UBE2D3-204ENST00000349311 FLIIQ13045 1269 aa12.1□□□□□ -0.47
UBE2D3-204ENST00000349311 PPARGC1BQ86YN6 1023 aaKnown RBP12.1□□□□□ -0.47
UBE2D3-204ENST00000349311 BAZ1AQ9NRL2 1556 aaPredicted RBP12.09□□□□□ -0.47
UBE2D3-204ENST00000349311 SLC19A1P41440 591 aa12.09□□□□□ -0.47
UBE2D3-204ENST00000349311 SPRYD7Q5W111 196 aa12.09□□□□□ -0.47
UBE2D3-204ENST00000349311 CTHP32929 405 aa12.07□□□□□ -0.48
UBE2D3-204ENST00000349311 TRIM32Q13049 653 aa12.07□□□□□ -0.48
UBE2D3-204ENST00000349311 PRKD2Q9BZL6 878 aa12.07□□□□□ -0.48
UBE2D3-204ENST00000349311 RSF1Q96T23 1441 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-204ENST00000349311 SMARCA4P51532 1647 aa12.05□□□□□ -0.48
UBE2D3-204ENST00000349311 ZBTB24O43167 697 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-204ENST00000349311 SKOR1P84550 965 aa12.05□□□□□ -0.48
UBE2D3-204ENST00000349311 FKBPLQ9UIM3 349 aa12.05□□□□□ -0.48
UBE2D3-204ENST00000349311 ZC3H4Q9UPT8 1303 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-204ENST00000349311 CECR2Q9BXF3 1484 aa12.04□□□□□ -0.48
UBE2D3-204ENST00000349311 WNT7BP56706 349 aa12.04□□□□□ -0.48
UBE2D3-204ENST00000349311 ZNF598Q86UK7 904 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-204ENST00000349311 ARMC2Q8NEN0 867 aa12.04□□□□□ -0.48
UBE2D3-204ENST00000349311 GPKOWQ92917 476 aaPredicted RBP eCLIP12.04□□□□□ -0.48
UBE2D3-204ENST00000349311 CD2BP2O95400 341 aaKnown RBP12.03□□□□□ -0.48
UBE2D3-204ENST00000349311 ZEB1P37275 1124 aaPredicted RBP12.03□□□□□ -0.48
UBE2D3-204ENST00000349311 BAP1Q92560 729 aa12.03□□□□□ -0.48
UBE2D3-204ENST00000349311 SH3BP2P78314 561 aa12.02□□□□□ -0.49
UBE2D3-204ENST00000349311 SH3RF1Q7Z6J0 888 aa12.02□□□□□ -0.49
UBE2D3-204ENST00000349311 ZNF511Q8NB15 262 aa12.02□□□□□ -0.49
UBE2D3-204ENST00000349311 MROH2BQ7Z745 1585 aa12.01□□□□□ -0.49
UBE2D3-204ENST00000349311 APBB1O00213 710 aa12.01□□□□□ -0.49
UBE2D3-204ENST00000349311 PDXDC2PQ6P474 469 aa12.01□□□□□ -0.49
UBE2D3-204ENST00000349311 NDUFB9Q9Y6M9 179 aa12.01□□□□□ -0.49
UBE2D3-204ENST00000349311 SH3BP5LQ7L8J4 393 aa12□□□□□ -0.49
UBE2D3-204ENST00000349311 OCSTAMPQ9BR26 566 aa11.99□□□□□ -0.49
UBE2D3-204ENST00000349311 COG6Q9Y2V7 657 aa11.99□□□□□ -0.49
UBE2D3-204ENST00000349311 PEG3Q9GZU2 1588 aa11.98□□□□□ -0.49
UBE2D3-204ENST00000349311 GDF9O60383 454 aa11.98□□□□□ -0.49
UBE2D3-204ENST00000349311 TRIM67Q6ZTA4 783 aa11.98□□□□□ -0.49
UBE2D3-204ENST00000349311 PKD2L1Q9P0L9 805 aa11.98□□□□□ -0.49
UBE2D3-204ENST00000349311 TBC1D2BQ9UPU7 963 aa11.98□□□□□ -0.49
UBE2D3-204ENST00000349311 GPSM3Q9Y4H4 160 aa11.98□□□□□ -0.49
UBE2D3-204ENST00000349311 SUPT5HO00267 1087 aaKnown RBP11.97□□□□□ -0.49
UBE2D3-204ENST00000349311 C4orf48Q5BLP8 95 aa11.97□□□□□ -0.49
UBE2D3-204ENST00000349311 ZNF697Q5TEC3 545 aa11.97□□□□□ -0.49
UBE2D3-204ENST00000349311 NBPF14Q5TI25 921 aa11.97□□□□□ -0.49
UBE2D3-204ENST00000349311 WNT7AO00755 349 aa11.96□□□□□ -0.49
UBE2D3-204ENST00000349311 IRF5Q13568 498 aa11.96□□□□□ -0.49
UBE2D3-204ENST00000349311 FOXJ1Q92949 421 aa11.96□□□□□ -0.49
UBE2D3-204ENST00000349311 WIZO95785 1651 aa11.95□□□□□ -0.5
UBE2D3-204ENST00000349311 LINC01559Q495D7 138 aa11.95□□□□□ -0.5
UBE2D3-204ENST00000349311 POM121Q96HA1 1249 aa11.95□□□□□ -0.5
UBE2D3-204ENST00000349311 C1QTNF2Q9BXJ5 285 aa11.95□□□□□ -0.5
UBE2D3-204ENST00000349311 SIAH2O43255 324 aa11.94□□□□□ -0.5
UBE2D3-204ENST00000349311 PRR20EP86478 221 aa11.94□□□□□ -0.5
UBE2D3-204ENST00000349311 PRR20CP86479 221 aa11.94□□□□□ -0.5
UBE2D3-204ENST00000349311 PRR20DP86480 221 aa11.94□□□□□ -0.5
UBE2D3-204ENST00000349311 PRR20BP86481 221 aa11.94□□□□□ -0.5
UBE2D3-204ENST00000349311 PRR20AP86496 221 aa11.94□□□□□ -0.5
UBE2D3-204ENST00000349311 PNMA1Q8ND90 353 aa11.94□□□□□ -0.5
UBE2D3-204ENST00000349311 RC3H1Q5TC82 1133 aaKnown RBP11.93□□□□□ -0.5
UBE2D3-204ENST00000349311 GDPD2Q9HCC8 539 aa11.93□□□□□ -0.5
UBE2D3-204ENST00000349311 BPHLQ86WA6 291 aaPredicted RBP11.92□□□□□ -0.5
UBE2D3-204ENST00000349311 MPNDQ8N594 471 aa11.92□□□□□ -0.5
UBE2D3-204ENST00000349311 PRM3Q9NNZ6 103 aa11.92□□□□□ -0.5
UBE2D3-204ENST00000349311 A6NJR5 290 aa11.91□□□□□ -0.5
UBE2D3-204ENST00000349311 UBTFP17480 764 aaKnown RBP11.91□□□□□ -0.5
UBE2D3-204ENST00000349311 VARSP26640 1264 aaKnown RBP11.91□□□□□ -0.5
UBE2D3-204ENST00000349311 FNBP4Q8N3X1 1017 aaPredicted RBP11.91□□□□□ -0.5
UBE2D3-204ENST00000349311 TRMT44Q8IYL2 757 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-204ENST00000349311 ZBBXA8MT70 800 aa11.89□□□□□ -0.51
UBE2D3-204ENST00000349311 PTK2Q05397 1052 aa11.89□□□□□ -0.51
UBE2D3-204ENST00000349311 MRGPRX2Q96LB1 330 aa11.89□□□□□ -0.51
UBE2D3-204ENST00000349311 FBXO45P0C2W1 286 aa11.88□□□□□ -0.51
UBE2D3-204ENST00000349311 TRIM26Q12899 539 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-204ENST00000349311 CLUAP1Q96AJ1 413 aa11.88□□□□□ -0.51
UBE2D3-204ENST00000349311 TOR4AQ9NXH8 423 aa11.88□□□□□ -0.51
UBE2D3-204ENST00000349311 TOP2AP11388 1531 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-204ENST00000349311 ERFEQ4G0M1 354 aa11.87□□□□□ -0.51
UBE2D3-204ENST00000349311 ARHGAP9Q9BRR9 750 aa11.87□□□□□ -0.51
UBE2D3-204ENST00000349311 NR1H3Q13133 447 aa11.86□□□□□ -0.51
UBE2D3-204ENST00000349311 CDK15Q96Q40 435 aa11.86□□□□□ -0.51
UBE2D3-204ENST00000349311 SMARCA2P51531 1590 aa11.86□□□□□ -0.51
UBE2D3-204ENST00000349311 EIF4G1Q04637 1599 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-204ENST00000349311 EHBP1Q8NDI1 1231 aa11.85□□□□□ -0.51
UBE2D3-204ENST00000349311 ABL2P42684 1182 aa11.84□□□□□ -0.51
UBE2D3-204ENST00000349311 ADAM32Q8TC27 787 aa11.84□□□□□ -0.51
UBE2D3-204ENST00000349311 RAD21O60216 631 aa11.83□□□□□ -0.52
UBE2D3-204ENST00000349311 FOXC1Q12948 553 aa11.83□□□□□ -0.52
UBE2D3-204ENST00000349311 FAM174AQ8TBP5 190 aa11.83□□□□□ -0.52
UBE2D3-204ENST00000349311 MAP4K5Q9Y4K4 846 aa11.83□□□□□ -0.52
UBE2D3-204ENST00000349311 WASHC4Q2M389 1173 aa11.82□□□□□ -0.52
UBE2D3-204ENST00000349311 TTBK1Q5TCY1 1321 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-204ENST00000349311 ZBTB33Q86T24 672 aa11.81□□□□□ -0.52
UBE2D3-204ENST00000349311 SNIP1Q8TAD8 396 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-204ENST00000349311 ZMYND15Q9H091 742 aa11.81□□□□□ -0.52
UBE2D3-204ENST00000349311 MAGEB6P1A0A0J9YX57 407 aa11.8□□□□□ -0.52
UBE2D3-204ENST00000349311 AGERQ15109 404 aa11.8□□□□□ -0.52
UBE2D3-204ENST00000349311 PROSER2Q86WR7 435 aaPredicted RBP11.8□□□□□ -0.52
UBE2D3-204ENST00000349311 ATAD2BQ9ULI0 1458 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms