RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 NRAPQ86VF7 1730 aa19.09■□□□□ 0.65
CLCC1-202ENST00000348264 NBPF8Q3BBV2 869 aa19.09■□□□□ 0.65
CLCC1-202ENST00000348264 UNC5CLQ8IV45 518 aa19.09■□□□□ 0.65
CLCC1-202ENST00000348264 RALGAPBQ86X10 1494 aa19.09■□□□□ 0.65
CLCC1-202ENST00000348264 PHRF1Q9P1Y6 1649 aaKnown RBP19.08■□□□□ 0.65
CLCC1-202ENST00000348264 CCDC61Q9Y6R9 512 aa19.08■□□□□ 0.64
CLCC1-202ENST00000348264 ACEP12821 1306 aa19.07■□□□□ 0.64
CLCC1-202ENST00000348264 PAK3O75914 559 aaPredicted RBP19.07■□□□□ 0.64
CLCC1-202ENST00000348264 PPIP5K1Q6PFW1 1433 aa19.07■□□□□ 0.64
CLCC1-202ENST00000348264 COL14A1Q05707 1796 aaKnown RBP19.06■□□□□ 0.64
CLCC1-202ENST00000348264 PLEKHG3A1L390 1219 aa19.06■□□□□ 0.64
CLCC1-202ENST00000348264 SRPK2P78362 688 aaKnown RBP19.06■□□□□ 0.64
CLCC1-202ENST00000348264 GJD4Q96KN9 370 aaPredicted RBP19.06■□□□□ 0.64
CLCC1-202ENST00000348264 CABP2Q9NPB3 220 aa19.06■□□□□ 0.64
CLCC1-202ENST00000348264 TONSLQ96HA7 1378 aa19.05■□□□□ 0.64
CLCC1-202ENST00000348264 FAM83GA6ND36 823 aa19.04■□□□□ 0.64
CLCC1-202ENST00000348264 BRWD3Q6RI45 1802 aa19.03■□□□□ 0.64
CLCC1-202ENST00000348264 ATAD2Q6PL18 1390 aa19.02■□□□□ 0.64
CLCC1-202ENST00000348264 NRKQ7Z2Y5 1582 aa19.02■□□□□ 0.63
CLCC1-202ENST00000348264 VPS72Q15906 364 aa19.01■□□□□ 0.63
CLCC1-202ENST00000348264 NUTM2GQ5VZR2 741 aa19■□□□□ 0.63
CLCC1-202ENST00000348264 EVC2Q86UK5 1308 aa19■□□□□ 0.63
CLCC1-202ENST00000348264 BTG4Q9NY30 223 aa18.98■□□□□ 0.63
CLCC1-202ENST00000348264 AKAP12Q02952 1782 aa18.98■□□□□ 0.63
CLCC1-202ENST00000348264 USP6P35125 1406 aa18.98■□□□□ 0.63
CLCC1-202ENST00000348264 KIAA0232Q92628 1395 aa18.97■□□□□ 0.63
CLCC1-202ENST00000348264 PRDM11Q9NQV5 511 aa18.97■□□□□ 0.63
CLCC1-202ENST00000348264 CABP1Q9NZU7 370 aa18.97■□□□□ 0.63
CLCC1-202ENST00000348264 CARD11Q9BXL7 1154 aa18.96■□□□□ 0.63
CLCC1-202ENST00000348264 CCDC9Q9Y3X0 531 aaKnown RBP18.96■□□□□ 0.63
CLCC1-202ENST00000348264 USP19O94966 1318 aa18.96■□□□□ 0.63
CLCC1-202ENST00000348264 PIK3C2AO00443 1686 aa18.95■□□□□ 0.62
CLCC1-202ENST00000348264 SBNO2Q9Y2G9 1366 aa18.95■□□□□ 0.62
CLCC1-202ENST00000348264 ABTB2Q8N961 1025 aa18.95■□□□□ 0.62
CLCC1-202ENST00000348264 BRD4O60885 1362 aaPredicted RBP18.93■□□□□ 0.62
CLCC1-202ENST00000348264 SSH2Q76I76 1423 aa18.93■□□□□ 0.62
CLCC1-202ENST00000348264 LMO7Q8WWI1 1683 aa18.93■□□□□ 0.62
CLCC1-202ENST00000348264 ZC3H6P61129 1189 aaKnown RBP18.93■□□□□ 0.62
CLCC1-202ENST00000348264 CHRNA2Q15822 529 aa18.93■□□□□ 0.62
CLCC1-202ENST00000348264 SEPT12Q8IYM1 358 aa18.93■□□□□ 0.62
CLCC1-202ENST00000348264 ONECUT3O60422 494 aaPredicted RBP18.91■□□□□ 0.62
CLCC1-202ENST00000348264 THSD7AQ9UPZ6 1657 aa18.91■□□□□ 0.62
CLCC1-202ENST00000348264 MON2Q7Z3U7 1717 aa18.91■□□□□ 0.62
CLCC1-202ENST00000348264 SLIT3O75094 1523 aa18.9■□□□□ 0.62
CLCC1-202ENST00000348264 SPATA31A5Q5VU36 1347 aa18.9■□□□□ 0.62
CLCC1-202ENST00000348264 SPATA31A7Q8IWB4 1347 aa18.9■□□□□ 0.62
CLCC1-202ENST00000348264 CPDO75976 1380 aa18.9■□□□□ 0.62
CLCC1-202ENST00000348264 FAM98CQ17RN3 349 aaKnown RBP18.89■□□□□ 0.61
CLCC1-202ENST00000348264 NLRP13Q86W25 1043 aa18.89■□□□□ 0.61
CLCC1-202ENST00000348264 CPSF1Q10570 1443 aaKnown RBP18.89■□□□□ 0.61
CLCC1-202ENST00000348264 CAMTA1Q9Y6Y1 1673 aa18.89■□□□□ 0.61
CLCC1-202ENST00000348264 A0A0G2JS52 829 aa18.86■□□□□ 0.61
CLCC1-202ENST00000348264 GCP02774 474 aa18.86■□□□□ 0.61
CLCC1-202ENST00000348264 MYT1Q01538 1121 aa18.86■□□□□ 0.61
CLCC1-202ENST00000348264 STRN4Q9NRL3 753 aa18.86■□□□□ 0.61
CLCC1-202ENST00000348264 CD163L1Q9NR16 1453 aa18.85■□□□□ 0.61
CLCC1-202ENST00000348264 SPATA31A1Q5TZJ5 1347 aa18.85■□□□□ 0.61
CLCC1-202ENST00000348264 TTC21BQ7Z4L5 1316 aa18.85■□□□□ 0.61
CLCC1-202ENST00000348264 NLRP6P59044 892 aa18.85■□□□□ 0.61
CLCC1-202ENST00000348264 KRT27Q7Z3Y8 459 aa18.85■□□□□ 0.61
CLCC1-202ENST00000348264 BLMP54132 1417 aaPredicted RBP18.83■□□□□ 0.61
CLCC1-202ENST00000348264 COL18A1P39060 1754 aa18.83■□□□□ 0.61
CLCC1-202ENST00000348264 KTN1Q86UP2 1357 aaKnown RBP18.83■□□□□ 0.61
CLCC1-202ENST00000348264 ZNF692Q9BU19 519 aaPredicted RBP18.83■□□□□ 0.6
CLCC1-202ENST00000348264 COL5A2P05997 1499 aaPredicted RBP18.83■□□□□ 0.6
CLCC1-202ENST00000348264 USP54Q70EL1 1684 aa18.82■□□□□ 0.6
CLCC1-202ENST00000348264 TESK2Q96S53 571 aa18.82■□□□□ 0.6
CLCC1-202ENST00000348264 TTC21AQ8NDW8 1320 aa18.81■□□□□ 0.6
CLCC1-202ENST00000348264 CCDC125Q86Z20 511 aa18.81■□□□□ 0.6
CLCC1-202ENST00000348264 NFAT5O94916 1531 aa18.8■□□□□ 0.6
CLCC1-202ENST00000348264 ST20-MTHFSA0A0A6YYL1 179 aa18.8■□□□□ 0.6
CLCC1-202ENST00000348264 LARP1Q6PKG0 1096 aaKnown RBP18.8■□□□□ 0.6
CLCC1-202ENST00000348264 RGPD5Q99666 1765 aa18.8■□□□□ 0.6
CLCC1-202ENST00000348264 ZBTB7CA1YPR0 619 aa18.79■□□□□ 0.6
CLCC1-202ENST00000348264 PCGF6Q9BYE7 350 aa18.79■□□□□ 0.6
CLCC1-202ENST00000348264 USP35Q9P2H5 1018 aa18.79■□□□□ 0.6
CLCC1-202ENST00000348264 AATKQ6ZMQ8 1374 aa18.79■□□□□ 0.6
CLCC1-202ENST00000348264 EVA1CP58658 441 aa18.78■□□□□ 0.6
CLCC1-202ENST00000348264 TMC1Q8TDI8 760 aa18.78■□□□□ 0.6
CLCC1-202ENST00000348264 SLC12A5Q9H2X9 1139 aa18.78■□□□□ 0.6
CLCC1-202ENST00000348264 SRCAPQ6ZRS2 3230 aa18.78■□□□□ 0.6
CLCC1-202ENST00000348264 A0A1W2PP64 1363 aa18.78■□□□□ 0.6
CLCC1-202ENST00000348264 USP47Q96K76 1375 aa18.78■□□□□ 0.6
CLCC1-202ENST00000348264 FAM182BQ5T319 152 aa18.77■□□□□ 0.6
CLCC1-202ENST00000348264 RGPD1P0DJD0 1748 aa18.77■□□□□ 0.59
CLCC1-202ENST00000348264 SOX12O15370 315 aa18.76■□□□□ 0.59
CLCC1-202ENST00000348264 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.76■□□□□ 0.59
CLCC1-202ENST00000348264 ZRANB1Q9UGI0 708 aa18.76■□□□□ 0.59
CLCC1-202ENST00000348264 TNS1Q9HBL0 1735 aaKnown RBP18.76■□□□□ 0.59
CLCC1-202ENST00000348264 PARP4Q9UKK3 1724 aaKnown RBP18.76■□□□□ 0.59
CLCC1-202ENST00000348264 WNK3Q9BYP7 1800 aa18.76■□□□□ 0.59
CLCC1-202ENST00000348264 CLSPNQ9HAW4 1339 aa18.75■□□□□ 0.59
CLCC1-202ENST00000348264 EDC4Q6P2E9 1401 aaKnown RBP18.75■□□□□ 0.59
CLCC1-202ENST00000348264 BARGINQ6ZT62 677 aa18.75■□□□□ 0.59
CLCC1-202ENST00000348264 DEFB132Q7Z7B7 95 aa18.75■□□□□ 0.59
CLCC1-202ENST00000348264 PUS7Q96PZ0 661 aaKnown RBP18.75■□□□□ 0.59
CLCC1-202ENST00000348264 USP31Q70CQ4 1352 aa18.75■□□□□ 0.59
CLCC1-202ENST00000348264 CRB1P82279 1406 aa18.74■□□□□ 0.59
CLCC1-202ENST00000348264 LTN1O94822 1766 aa18.74■□□□□ 0.59
CLCC1-202ENST00000348264 HDGFL2Q7Z4V5 671 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms