RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 PDZRN3Q9UPQ7 1066 aa22.52■■□□□ 1.2
UBE3C-201ENST00000348165 CCDC184Q52MB2 194 aa22.51■■□□□ 1.19
UBE3C-201ENST00000348165 DNAJC2Q99543 621 aaKnown RBP22.5■■□□□ 1.19
UBE3C-201ENST00000348165 TCEAL9Q9UHQ7 104 aa22.5■■□□□ 1.19
UBE3C-201ENST00000348165 KIAA0586Q9BVV6 1533 aa22.5■■□□□ 1.19
UBE3C-201ENST00000348165 CNTROBQ8N137 903 aa22.5■■□□□ 1.19
UBE3C-201ENST00000348165 TIAM1Q13009 1591 aa22.5■■□□□ 1.19
UBE3C-201ENST00000348165 RPGRIP1LQ68CZ1 1315 aa22.5■■□□□ 1.19
UBE3C-201ENST00000348165 NUTM2BA6NNL0 878 aaPredicted RBP22.5■■□□□ 1.19
UBE3C-201ENST00000348165 NUTM2EB1AL46 878 aaPredicted RBP22.5■■□□□ 1.19
UBE3C-201ENST00000348165 NUTM2AQ8IVF1 878 aaPredicted RBP22.5■■□□□ 1.19
UBE3C-201ENST00000348165 SMG6Q86US8 1419 aaKnown RBP22.49■■□□□ 1.19
UBE3C-201ENST00000348165 ANKRD30BQ9BXX2 1392 aa22.49■■□□□ 1.19
UBE3C-201ENST00000348165 NUCB2P80303 420 aa22.49■■□□□ 1.19
UBE3C-201ENST00000348165 PDE3AQ14432 1141 aa22.49■■□□□ 1.19
UBE3C-201ENST00000348165 GNAI2P04899 355 aa22.48■■□□□ 1.19
UBE3C-201ENST00000348165 HECW1Q76N89 1606 aa22.48■■□□□ 1.19
UBE3C-201ENST00000348165 CABP4P57796 275 aa22.48■■□□□ 1.19
UBE3C-201ENST00000348165 PRDM11Q9NQV5 511 aa22.48■■□□□ 1.19
UBE3C-201ENST00000348165 MTMR7Q9Y216 660 aa22.48■■□□□ 1.19
UBE3C-201ENST00000348165 KIF6Q6ZMV9 814 aa22.48■■□□□ 1.19
UBE3C-201ENST00000348165 EPRSP07814 1512 aaKnown RBP22.47■■□□□ 1.19
UBE3C-201ENST00000348165 SAFBQ15424 915 aaKnown RBP eCLIP22.46■■□□□ 1.197e-7■■■□□ 15.9
UBE3C-201ENST00000348165 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
UBE3C-201ENST00000348165 TPM1P09493 284 aa22.46■■□□□ 1.19
UBE3C-201ENST00000348165 CCDC61Q9Y6R9 512 aa22.46■■□□□ 1.19
UBE3C-201ENST00000348165 WAPLQ7Z5K2 1190 aa22.45■■□□□ 1.19
UBE3C-201ENST00000348165 ZC3H6P61129 1189 aaKnown RBP22.45■■□□□ 1.18
UBE3C-201ENST00000348165 WWC1Q8IX03 1113 aa22.45■■□□□ 1.18
UBE3C-201ENST00000348165 ARHGEF11O15085 1522 aa22.45■■□□□ 1.18
UBE3C-201ENST00000348165 KDM4AO75164 1064 aa22.45■■□□□ 1.18
UBE3C-201ENST00000348165 CCAR2Q8N163 923 aaKnown RBP22.45■■□□□ 1.18
UBE3C-201ENST00000348165 NUDT16Q96DE0 195 aaKnown RBP22.45■■□□□ 1.18
UBE3C-201ENST00000348165 PHF23Q9BUL5 403 aaPredicted RBP22.45■■□□□ 1.18
UBE3C-201ENST00000348165 NINLQ9Y2I6 1382 aa22.44■■□□□ 1.18
UBE3C-201ENST00000348165 TPM2P07951 284 aa22.44■■□□□ 1.18
UBE3C-201ENST00000348165 MYL6BP14649 208 aa22.44■■□□□ 1.18
UBE3C-201ENST00000348165 TBC1D2BQ9UPU7 963 aa22.44■■□□□ 1.18
UBE3C-201ENST00000348165 NAIPQ13075 1403 aa22.44■■□□□ 1.18
UBE3C-201ENST00000348165 A0A0U1RQG5 324 aaPredicted RBP22.44■■□□□ 1.18
UBE3C-201ENST00000348165 NEK4P51957 841 aa22.43■■□□□ 1.18
UBE3C-201ENST00000348165 WDR63Q8IWG1 891 aa22.43■■□□□ 1.18
UBE3C-201ENST00000348165 PCMTD1Q96MG8 357 aaPredicted RBP22.43■■□□□ 1.18
UBE3C-201ENST00000348165 ATAD2Q6PL18 1390 aa22.43■■□□□ 1.18
UBE3C-201ENST00000348165 SIL1Q9H173 461 aa22.43■■□□□ 1.18
UBE3C-201ENST00000348165 SRCIN1Q9C0H9 1055 aa22.43■■□□□ 1.18
UBE3C-201ENST00000348165 CCDC47Q96A33 483 aaKnown RBP22.43■■□□□ 1.18
UBE3C-201ENST00000348165 AKNAQ7Z591 1439 aa22.43■■□□□ 1.18
UBE3C-201ENST00000348165 ATF7IPQ6VMQ6 1270 aa22.42■■□□□ 1.18
UBE3C-201ENST00000348165 CCDC73Q6ZRK6 1079 aa22.41■■□□□ 1.18
UBE3C-201ENST00000348165 CNNM1Q9NRU3 951 aa22.41■■□□□ 1.18
UBE3C-201ENST00000348165 SPG7Q9UQ90 795 aa22.41■■□□□ 1.18
UBE3C-201ENST00000348165 GCC1Q96CN9 775 aa22.41■■□□□ 1.18
UBE3C-201ENST00000348165 PSMA5P28066 241 aa22.41■■□□□ 1.18
UBE3C-201ENST00000348165 CCT4P50991 539 aaKnown RBP22.4■■□□□ 1.18
UBE3C-201ENST00000348165 PLB1Q6P1J6 1458 aa22.39■■□□□ 1.18
UBE3C-201ENST00000348165 HOOK1Q9UJC3 728 aaKnown RBP22.39■■□□□ 1.17
UBE3C-201ENST00000348165 FCHSD2O94868 740 aa22.38■■□□□ 1.17
UBE3C-201ENST00000348165 GOLGA6L1Q8N7Z2 621 aa22.38■■□□□ 1.17
UBE3C-201ENST00000348165 SASS6Q6UVJ0 657 aa22.38■■□□□ 1.17
UBE3C-201ENST00000348165 ZNF592Q92610 1267 aa22.38■■□□□ 1.17
UBE3C-201ENST00000348165 ANKRD20A12PQ8NF67 263 aa22.38■■□□□ 1.17
UBE3C-201ENST00000348165 ERC1Q8IUD2 1116 aa22.38■■□□□ 1.17
UBE3C-201ENST00000348165 POGZQ7Z3K3 1410 aa22.37■■□□□ 1.17
UBE3C-201ENST00000348165 NSD3Q9BZ95 1437 aa22.37■■□□□ 1.17
UBE3C-201ENST00000348165 MAGI1Q96QZ7 1491 aaPredicted RBP22.37■■□□□ 1.17
UBE3C-201ENST00000348165 THUMPD2Q9BTF0 503 aaKnown RBP22.37■■□□□ 1.17
UBE3C-201ENST00000348165 CD109Q6YHK3 1445 aa22.37■■□□□ 1.17
UBE3C-201ENST00000348165 PRM3Q9NNZ6 103 aa22.37■■□□□ 1.17
UBE3C-201ENST00000348165 ABCA10Q8WWZ4 1543 aa22.37■■□□□ 1.17
UBE3C-201ENST00000348165 ATP2B1P20020 1258 aa22.36■■□□□ 1.17
UBE3C-201ENST00000348165 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.36■■□□□ 1.17
UBE3C-201ENST00000348165 SUPT6HQ7KZ85 1726 aaKnown RBP22.36■■□□□ 1.17
UBE3C-201ENST00000348165 RRP12Q5JTH9 1297 aaKnown RBP22.36■■□□□ 1.17
UBE3C-201ENST00000348165 IPO7O95373 1038 aaKnown RBP22.35■■□□□ 1.17
UBE3C-201ENST00000348165 MIS18AQ9NYP9 233 aa22.35■■□□□ 1.17
UBE3C-201ENST00000348165 NFKBIBQ15653 356 aa22.35■■□□□ 1.17
UBE3C-201ENST00000348165 BTBD11A6QL63 1104 aa22.35■■□□□ 1.17
UBE3C-201ENST00000348165 TMPOP42166 694 aaKnown RBP22.35■■□□□ 1.17
UBE3C-201ENST00000348165 MVPQ14764 893 aaKnown RBP22.35■■□□□ 1.17
UBE3C-201ENST00000348165 CCDC158Q5M9N0 1113 aa22.35■■□□□ 1.17
UBE3C-201ENST00000348165 LRRCC1Q9C099 1032 aa22.35■■□□□ 1.17
UBE3C-201ENST00000348165 PIP4K2BP78356 416 aa22.34■■□□□ 1.17
UBE3C-201ENST00000348165 FBXO31Q5XUX0 539 aaPredicted RBP22.34■■□□□ 1.17
UBE3C-201ENST00000348165 CCDC43Q96MW1 224 aaKnown RBP22.34■■□□□ 1.17
UBE3C-201ENST00000348165 CCDC141Q6ZP82 1450 aa22.34■■□□□ 1.17
UBE3C-201ENST00000348165 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.34■■□□□ 1.171e-6■□□□□ 9.9
UBE3C-201ENST00000348165 CT47B1P0C2W7 299 aaPredicted RBP22.34■■□□□ 1.17
UBE3C-201ENST00000348165 SART3Q15020 963 aaKnown RBP22.34■■□□□ 1.17
UBE3C-201ENST00000348165 SDF4Q9BRK5 362 aa22.34■■□□□ 1.17
UBE3C-201ENST00000348165 FAM13BQ9NYF5 915 aa22.34■■□□□ 1.17
UBE3C-201ENST00000348165 PODXL2Q9NZ53 605 aa22.34■■□□□ 1.17
UBE3C-201ENST00000348165 WDR97A6NE52 1622 aa22.33■■□□□ 1.17
UBE3C-201ENST00000348165 IKQ13123 557 aaPredicted RBP22.33■■□□□ 1.17
UBE3C-201ENST00000348165 NFE2L2Q16236 605 aa22.33■■□□□ 1.17
UBE3C-201ENST00000348165 TTC39AQ5SRH9 613 aa22.33■■□□□ 1.17
UBE3C-201ENST00000348165 MAP4K4O95819 1239 aaPredicted RBP22.33■■□□□ 1.16
UBE3C-201ENST00000348165 SRGAP3O43295 1099 aa22.32■■□□□ 1.16
UBE3C-201ENST00000348165 ZNF771Q7L3S4 317 aaPredicted RBP22.32■■□□□ 1.16
UBE3C-201ENST00000348165 HIP1O00291 1037 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms