RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TRDNQ13061 729 aa13.26□□□□□ -0.29
CLCN6-202ENST00000346436 NOB1Q9ULX3 412 aaKnown RBP13.26□□□□□ -0.29
CLCN6-202ENST00000346436 RPGRIP1LQ68CZ1 1315 aa13.25□□□□□ -0.29
CLCN6-202ENST00000346436 PDE3AQ14432 1141 aa13.25□□□□□ -0.29
CLCN6-202ENST00000346436 RILPL2Q969X0 211 aa13.25□□□□□ -0.29
CLCN6-202ENST00000346436 CHMP5Q9NZZ3 219 aa13.25□□□□□ -0.29
CLCN6-202ENST00000346436 CCDC141Q6ZP82 1450 aa13.25□□□□□ -0.29
CLCN6-202ENST00000346436 APPP05067 770 aa13.25□□□□□ -0.29
CLCN6-202ENST00000346436 DUSP27Q5VZP5 1158 aa13.25□□□□□ -0.29
CLCN6-202ENST00000346436 SLC26A8Q96RN1 970 aa13.25□□□□□ -0.29
CLCN6-202ENST00000346436 TSPYL4Q9UJ04 414 aa13.25□□□□□ -0.29
CLCN6-202ENST00000346436 NBPF14Q5TI25 921 aa13.25□□□□□ -0.29
CLCN6-202ENST00000346436 KCNH5Q8NCM2 988 aa13.25□□□□□ -0.29
CLCN6-202ENST00000346436 TMOD2Q9NZR1 351 aa13.24□□□□□ -0.29
CLCN6-202ENST00000346436 ADAMTS2O95450 1211 aa13.24□□□□□ -0.29
CLCN6-202ENST00000346436 RUFY2Q8WXA3 655 aa13.24□□□□□ -0.29
CLCN6-202ENST00000346436 NUP153P49790 1475 aaKnown RBP13.24□□□□□ -0.29
CLCN6-202ENST00000346436 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
CLCN6-202ENST00000346436 CADPS2Q86UW7 1296 aa13.23□□□□□ -0.29
CLCN6-202ENST00000346436 C16orf71Q8IYS4 520 aaPredicted RBP13.23□□□□□ -0.29
CLCN6-202ENST00000346436 API5Q9BZZ5 524 aaKnown RBP13.23□□□□□ -0.29
CLCN6-202ENST00000346436 DHX29Q7Z478 1369 aaKnown RBP13.23□□□□□ -0.29
CLCN6-202ENST00000346436 IFIT2P09913 472 aaKnown RBP13.23□□□□□ -0.29
CLCN6-202ENST00000346436 CSPP1Q1MSJ5 1256 aa13.23□□□□□ -0.29
CLCN6-202ENST00000346436 CCDC47Q96A33 483 aaKnown RBP13.23□□□□□ -0.29
CLCN6-202ENST00000346436 PRKAR2BP31323 418 aa13.22□□□□□ -0.29
CLCN6-202ENST00000346436 IKQ13123 557 aaPredicted RBP13.22□□□□□ -0.29
CLCN6-202ENST00000346436 ZNF652Q9Y2D9 606 aa13.22□□□□□ -0.29
CLCN6-202ENST00000346436 FKBP5Q13451 457 aaPredicted RBP13.22□□□□□ -0.29
CLCN6-202ENST00000346436 PRAM1Q96QH2 718 aa13.22□□□□□ -0.29
CLCN6-202ENST00000346436 SLC3A2P08195 630 aaKnown RBP13.21□□□□□ -0.29
CLCN6-202ENST00000346436 GNAI1P63096 354 aa13.21□□□□□ -0.29
CLCN6-202ENST00000346436 CCDC27Q2M243 656 aa13.21□□□□□ -0.29
CLCN6-202ENST00000346436 KIF14Q15058 1648 aa13.21□□□□□ -0.29
CLCN6-202ENST00000346436 ST18O60284 1047 aa13.21□□□□□ -0.29
CLCN6-202ENST00000346436 BCL11BQ9C0K0 894 aaPredicted RBP13.21□□□□□ -0.29
CLCN6-202ENST00000346436 TCOF1Q13428 1488 aaKnown RBP13.21□□□□□ -0.29
CLCN6-202ENST00000346436 NSD3Q9BZ95 1437 aa13.21□□□□□ -0.29
CLCN6-202ENST00000346436 ADGRF5Q8IZF2 1346 aa13.21□□□□□ -0.29
CLCN6-202ENST00000346436 KIF16BQ96L93 1317 aa13.21□□□□□ -0.29
CLCN6-202ENST00000346436 MSH6P52701 1360 aa13.21□□□□□ -0.3
CLCN6-202ENST00000346436 IGHDP01880 384 aa13.21□□□□□ -0.3
CLCN6-202ENST00000346436 TRIM29Q14134 588 aa13.2□□□□□ -0.3
CLCN6-202ENST00000346436 TBC1D2BQ9UPU7 963 aa13.2□□□□□ -0.3
CLCN6-202ENST00000346436 FAM177BA6PVY3 158 aa13.2□□□□□ -0.3
CLCN6-202ENST00000346436 DIAPH3Q9NSV4 1193 aa13.2□□□□□ -0.3
CLCN6-202ENST00000346436 ZPR1O75312 459 aa13.19□□□□□ -0.3
CLCN6-202ENST00000346436 PTMSP20962 102 aa13.19□□□□□ -0.3
CLCN6-202ENST00000346436 MVPQ14764 893 aaKnown RBP13.19□□□□□ -0.3
CLCN6-202ENST00000346436 TRAK2O60296 914 aa13.18□□□□□ -0.3
CLCN6-202ENST00000346436 SF3A1Q15459 793 aaKnown RBP13.18□□□□□ -0.3
CLCN6-202ENST00000346436 DRC7Q8IY82 874 aa13.18□□□□□ -0.3
CLCN6-202ENST00000346436 RAPGEF6Q8TEU7 1601 aa13.18□□□□□ -0.3
CLCN6-202ENST00000346436 CABP1Q9NZU7 370 aa13.18□□□□□ -0.3
CLCN6-202ENST00000346436 RALGAPBQ86X10 1494 aa13.18□□□□□ -0.3
CLCN6-202ENST00000346436 POLD1P28340 1107 aa13.18□□□□□ -0.3
CLCN6-202ENST00000346436 AIMP1Q12904 312 aaKnown RBP13.18□□□□□ -0.3
CLCN6-202ENST00000346436 MAGI3Q5TCQ9 1506 aa13.18□□□□□ -0.3
CLCN6-202ENST00000346436 RTEL1-TNFRSF6BF6WH68 1400 aa13.18□□□□□ -0.3
CLCN6-202ENST00000346436 TPM2P07951 284 aa13.18□□□□□ -0.3
CLCN6-202ENST00000346436 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
CLCN6-202ENST00000346436 MCTP1Q6DN14 999 aa13.17□□□□□ -0.3
CLCN6-202ENST00000346436 RSPH6AQ9H0K4 717 aa13.17□□□□□ -0.3
CLCN6-202ENST00000346436 STARD3NLO95772 234 aa13.17□□□□□ -0.3
CLCN6-202ENST00000346436 RBM5P52756 815 aaKnown RBP eCLIP13.17□□□□□ -0.38e-6■■■■□ 20.7
CLCN6-202ENST00000346436 RARSP54136 660 aaKnown RBP13.17□□□□□ -0.3
CLCN6-202ENST00000346436 DENND4BO75064 1496 aaPredicted RBP13.16□□□□□ -0.3
CLCN6-202ENST00000346436 PZPP20742 1482 aa13.16□□□□□ -0.3
CLCN6-202ENST00000346436 NOC3LQ8WTT2 800 aaKnown RBP13.16□□□□□ -0.3
CLCN6-202ENST00000346436 WDR63Q8IWG1 891 aa13.16□□□□□ -0.3
CLCN6-202ENST00000346436 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
CLCN6-202ENST00000346436 WDR62O43379 1518 aa13.15□□□□□ -0.3
CLCN6-202ENST00000346436 KDM6BO15054 1643 aa13.15□□□□□ -0.3
CLCN6-202ENST00000346436 NKTRP30414 1462 aaKnown RBP13.15□□□□□ -0.3
CLCN6-202ENST00000346436 TMEM57Q8N5G2 664 aa13.15□□□□□ -0.3
CLCN6-202ENST00000346436 FAM184AQ8NB25 1140 aa13.15□□□□□ -0.3
CLCN6-202ENST00000346436 ZNF530Q6P9A1 599 aaPredicted RBP13.15□□□□□ -0.3
CLCN6-202ENST00000346436 PARD3Q8TEW0 1356 aa13.14□□□□□ -0.31
CLCN6-202ENST00000346436 CDK19Q9BWU1 502 aa13.14□□□□□ -0.31
CLCN6-202ENST00000346436 TNNQ9UQP3 1299 aa13.14□□□□□ -0.31
CLCN6-202ENST00000346436 EXOC5O00471 708 aa13.14□□□□□ -0.31
CLCN6-202ENST00000346436 RNF20Q5VTR2 975 aa13.14□□□□□ -0.31
CLCN6-202ENST00000346436 CPLX1O14810 134 aa13.14□□□□□ -0.31
CLCN6-202ENST00000346436 ERC2O15083 957 aa13.14□□□□□ -0.31
CLCN6-202ENST00000346436 SYAP1Q96A49 352 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-202ENST00000346436 NEUROD6Q96NK8 337 aa13.14□□□□□ -0.31
CLCN6-202ENST00000346436 ZKSCAN1P17029 563 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-202ENST00000346436 TESK2Q96S53 571 aa13.14□□□□□ -0.31
CLCN6-202ENST00000346436 CNNM1Q9NRU3 951 aa13.14□□□□□ -0.31
CLCN6-202ENST00000346436 CCDC30Q5VVM6 783 aa13.13□□□□□ -0.31
CLCN6-202ENST00000346436 NFXL1Q6ZNB6 911 aa13.13□□□□□ -0.31
CLCN6-202ENST00000346436 ANO2Q9NQ90 1003 aa13.13□□□□□ -0.31
CLCN6-202ENST00000346436 TTLL12Q14166 644 aaPredicted RBP13.13□□□□□ -0.31
CLCN6-202ENST00000346436 TWISTNBQ3B726 338 aaPredicted RBP13.13□□□□□ -0.31
CLCN6-202ENST00000346436 PRAG1Q86YV5 1406 aa13.13□□□□□ -0.31
CLCN6-202ENST00000346436 ATP10BO94823 1461 aa13.13□□□□□ -0.31
CLCN6-202ENST00000346436 SKOR2Q2VWA4 1001 aaPredicted RBP13.13□□□□□ -0.31
CLCN6-202ENST00000346436 MPHOSPH8Q99549 860 aa13.13□□□□□ -0.31
CLCN6-202ENST00000346436 TMOD3Q9NYL9 352 aa13.13□□□□□ -0.31
CLCN6-202ENST00000346436 H3BQV1 296 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms