RNA–Protein interactions for RNA: ENST00000345165.8

CCDC78-202, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC78, Length 1,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-202ENST00000345165 SLIT2O94813 1529 aa26.85■■□□□ 1.89
CCDC78-202ENST00000345165 CABP2Q9NPB3 220 aa26.84■■□□□ 1.89
CCDC78-202ENST00000345165 BCL9LQ86UU0 1499 aa26.83■■□□□ 1.89
CCDC78-202ENST00000345165 PUS7Q96PZ0 661 aaKnown RBP26.83■■□□□ 1.89
CCDC78-202ENST00000345165 ATRNO75882 1429 aa26.82■■□□□ 1.88
CCDC78-202ENST00000345165 AKAP12Q02952 1782 aa26.81■■□□□ 1.88
CCDC78-202ENST00000345165 RXRBP28702 533 aa26.81■■□□□ 1.88
CCDC78-202ENST00000345165 USP21Q9UK80 565 aa26.81■■□□□ 1.88
CCDC78-202ENST00000345165 PLCH1Q4KWH8 1693 aa26.81■■□□□ 1.88
CCDC78-202ENST00000345165 PHRF1Q9P1Y6 1649 aaKnown RBP26.8■■□□□ 1.88
CCDC78-202ENST00000345165 TRPC5Q9UL62 973 aaPredicted RBP26.8■■□□□ 1.88
CCDC78-202ENST00000345165 USP6P35125 1406 aa26.8■■□□□ 1.88
CCDC78-202ENST00000345165 RBM6P78332 1123 aaKnown RBP26.79■■□□□ 1.88
CCDC78-202ENST00000345165 LMOD2Q6P5Q4 547 aa26.79■■□□□ 1.88
CCDC78-202ENST00000345165 QTRT2Q9H974 415 aaKnown RBP26.79■■□□□ 1.88
CCDC78-202ENST00000345165 COL14A1Q05707 1796 aaKnown RBP26.79■■□□□ 1.88
CCDC78-202ENST00000345165 HAP1P54257 671 aaPredicted RBP26.78■■□□□ 1.88
CCDC78-202ENST00000345165 SSH2Q76I76 1423 aa26.77■■□□□ 1.88
CCDC78-202ENST00000345165 CABP1Q9NZU7 370 aa26.77■■□□□ 1.88
CCDC78-202ENST00000345165 PAK3O75914 559 aaPredicted RBP26.76■■□□□ 1.87
CCDC78-202ENST00000345165 NRKQ7Z2Y5 1582 aa26.75■■□□□ 1.87
CCDC78-202ENST00000345165 CPSF1Q10570 1443 aaKnown RBP26.75■■□□□ 1.87
CCDC78-202ENST00000345165 CABLES1Q8TDN4 633 aa26.75■■□□□ 1.87
CCDC78-202ENST00000345165 ZNF692Q9BU19 519 aaPredicted RBP26.75■■□□□ 1.87
CCDC78-202ENST00000345165 MON2Q7Z3U7 1717 aa26.74■■□□□ 1.87
CCDC78-202ENST00000345165 USP19O94966 1318 aa26.73■■□□□ 1.87
CCDC78-202ENST00000345165 UNC5CLQ8IV45 518 aa26.73■■□□□ 1.87
CCDC78-202ENST00000345165 CCER1Q8TC90 406 aaPredicted RBP26.73■■□□□ 1.87
CCDC78-202ENST00000345165 TESK2Q96S53 571 aa26.73■■□□□ 1.87
CCDC78-202ENST00000345165 NINLQ9Y2I6 1382 aa26.72■■□□□ 1.87
CCDC78-202ENST00000345165 NRAPQ86VF7 1730 aa26.72■■□□□ 1.87
CCDC78-202ENST00000345165 USP47Q96K76 1375 aa26.71■■□□□ 1.87
CCDC78-202ENST00000345165 RGS12O14924 1447 aa26.7■■□□□ 1.86
CCDC78-202ENST00000345165 ST20-MTHFSA0A0A6YYL1 179 aa26.69■■□□□ 1.86
CCDC78-202ENST00000345165 PIK3C2AO00443 1686 aa26.69■■□□□ 1.86
CCDC78-202ENST00000345165 ABTB2Q8N961 1025 aa26.68■■□□□ 1.86
CCDC78-202ENST00000345165 CPDO75976 1380 aa26.68■■□□□ 1.86
CCDC78-202ENST00000345165 TTC21AQ8NDW8 1320 aa26.67■■□□□ 1.86
CCDC78-202ENST00000345165 USP54Q70EL1 1684 aa26.67■■□□□ 1.86
CCDC78-202ENST00000345165 SLIT3O75094 1523 aa26.67■■□□□ 1.86
CCDC78-202ENST00000345165 NLRP13Q86W25 1043 aa26.67■■□□□ 1.86
CCDC78-202ENST00000345165 FAM83GA6ND36 823 aa26.66■■□□□ 1.86
CCDC78-202ENST00000345165 CD163L1Q9NR16 1453 aa26.66■■□□□ 1.86
CCDC78-202ENST00000345165 VPS72Q15906 364 aa26.65■■□□□ 1.86
CCDC78-202ENST00000345165 GJD4Q96KN9 370 aaPredicted RBP26.65■■□□□ 1.86
CCDC78-202ENST00000345165 GLI3P10071 1580 aa26.65■■□□□ 1.86
CCDC78-202ENST00000345165 KTN1Q86UP2 1357 aaKnown RBP26.63■■□□□ 1.85
CCDC78-202ENST00000345165 LMO7Q8WWI1 1683 aa26.62■■□□□ 1.85
CCDC78-202ENST00000345165 KIAA0232Q92628 1395 aa26.61■■□□□ 1.85
CCDC78-202ENST00000345165 PRDM11Q9NQV5 511 aa26.61■■□□□ 1.85
CCDC78-202ENST00000345165 TTC21BQ7Z4L5 1316 aa26.61■■□□□ 1.85
CCDC78-202ENST00000345165 EDC4Q6P2E9 1401 aaKnown RBP26.6■■□□□ 1.85
CCDC78-202ENST00000345165 TMF1P82094 1093 aa26.59■■□□□ 1.85
CCDC78-202ENST00000345165 TERF2IPQ9NYB0 399 aa26.59■■□□□ 1.85
CCDC78-202ENST00000345165 CDCA8Q53HL2 280 aa26.58■■□□□ 1.85
CCDC78-202ENST00000345165 GCP02774 474 aa26.57■■□□□ 1.84
CCDC78-202ENST00000345165 HDGFL2Q7Z4V5 671 aaPredicted RBP26.57■■□□□ 1.84
CCDC78-202ENST00000345165 BTG4Q9NY30 223 aa26.57■■□□□ 1.84
CCDC78-202ENST00000345165 ABCC6O95255 1503 aa26.56■■□□□ 1.84
CCDC78-202ENST00000345165 ONECUT3O60422 494 aaPredicted RBP26.56■■□□□ 1.84
CCDC78-202ENST00000345165 NLRP6P59044 892 aa26.56■■□□□ 1.84
CCDC78-202ENST00000345165 NUTM2GQ5VZR2 741 aa26.56■■□□□ 1.84
CCDC78-202ENST00000345165 USP31Q70CQ4 1352 aa26.56■■□□□ 1.84
CCDC78-202ENST00000345165 PLEKHG5O94827 1062 aa26.55■■□□□ 1.84
CCDC78-202ENST00000345165 A0A1W2PP64 1363 aa26.55■■□□□ 1.84
CCDC78-202ENST00000345165 KCNH5Q8NCM2 988 aa26.53■■□□□ 1.84
CCDC78-202ENST00000345165 SLC12A5Q9H2X9 1139 aa26.53■■□□□ 1.84
CCDC78-202ENST00000345165 TMC1Q8TDI8 760 aa26.52■■□□□ 1.84
CCDC78-202ENST00000345165 NFAT5O94916 1531 aa26.51■■□□□ 1.83
CCDC78-202ENST00000345165 AATKQ6ZMQ8 1374 aa26.51■■□□□ 1.83
CCDC78-202ENST00000345165 ANKRD36BQ8N2N9 1353 aa26.51■■□□□ 1.83
CCDC78-202ENST00000345165 CAMTA1Q9Y6Y1 1673 aa26.5■■□□□ 1.83
CCDC78-202ENST00000345165 SPATA31A5Q5VU36 1347 aa26.5■■□□□ 1.83
CCDC78-202ENST00000345165 SPATA31A7Q8IWB4 1347 aa26.5■■□□□ 1.83
CCDC78-202ENST00000345165 ZC3H6P61129 1189 aaKnown RBP26.5■■□□□ 1.83
CCDC78-202ENST00000345165 COL18A1P39060 1754 aa26.49■■□□□ 1.83
CCDC78-202ENST00000345165 MYOM1P52179 1685 aa26.48■■□□□ 1.83
CCDC78-202ENST00000345165 THSD7AQ9UPZ6 1657 aa26.48■■□□□ 1.83
CCDC78-202ENST00000345165 BRWD3Q6RI45 1802 aa26.47■■□□□ 1.83
CCDC78-202ENST00000345165 UPF1Q92900 1129 aaKnown RBP eCLIP26.47■■□□□ 1.83
CCDC78-202ENST00000345165 CHRNA2Q15822 529 aa26.46■■□□□ 1.83
CCDC78-202ENST00000345165 COL5A2P05997 1499 aaPredicted RBP26.46■■□□□ 1.83
CCDC78-202ENST00000345165 OVOS2A0A0J9YW53 1432 aa26.46■■□□□ 1.83
CCDC78-202ENST00000345165 OVOS2Q6IE36 1432 aa26.46■■□□□ 1.83
CCDC78-202ENST00000345165 EP400Q96L91 3159 aa26.45■■□□□ 1.83
CCDC78-202ENST00000345165 EIF4G2P78344 907 aaKnown RBP eCLIP26.44■■□□□ 1.82
CCDC78-202ENST00000345165 CCDC9Q9Y3X0 531 aaKnown RBP26.44■■□□□ 1.82
CCDC78-202ENST00000345165 SPATA31A1Q5TZJ5 1347 aa26.43■■□□□ 1.82
CCDC78-202ENST00000345165 ARHGEF25Q86VW2 580 aa26.43■■□□□ 1.82
CCDC78-202ENST00000345165 SEPT12Q8IYM1 358 aa26.41■■□□□ 1.82
CCDC78-202ENST00000345165 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.4■■□□□ 1.82
CCDC78-202ENST00000345165 NME9Q86XW9 330 aa26.39■■□□□ 1.82
CCDC78-202ENST00000345165 THRAP3Q9Y2W1 955 aaKnown RBP26.39■■□□□ 1.82
CCDC78-202ENST00000345165 CRB1P82279 1406 aa26.39■■□□□ 1.81
CCDC78-202ENST00000345165 LTN1O94822 1766 aa26.38■■□□□ 1.81
CCDC78-202ENST00000345165 BARGINQ6ZT62 677 aa26.38■■□□□ 1.81
CCDC78-202ENST00000345165 EVA1CP58658 441 aa26.37■■□□□ 1.81
CCDC78-202ENST00000345165 CCDC125Q86Z20 511 aa26.37■■□□□ 1.81
CCDC78-202ENST00000345165 STRN4Q9NRL3 753 aa26.36■■□□□ 1.81
CCDC78-202ENST00000345165 FAM98CQ17RN3 349 aaKnown RBP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms