RNA–Protein interactions for RNA: ENST00000345008.6

LYPD1-201, Transcript of LY6/PLAUR domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LYPD1, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD1-201ENST00000345008 FAM83GA6ND36 823 aa28.2■■■□□ 2.1
LYPD1-201ENST00000345008 VPS72Q15906 364 aa28.2■■■□□ 2.1
LYPD1-201ENST00000345008 TRPM1Q7Z4N2 1603 aa28.19■■■□□ 2.1
LYPD1-201ENST00000345008 CRYBG1Q9Y4K1 1723 aa28.19■■■□□ 2.1
LYPD1-201ENST00000345008 CCDC9Q9Y3X0 531 aaKnown RBP28.19■■■□□ 2.1
LYPD1-201ENST00000345008 EP400Q96L91 3159 aa28.19■■■□□ 2.1
LYPD1-201ENST00000345008 SRPK2P78362 688 aaKnown RBP28.18■■■□□ 2.1
LYPD1-201ENST00000345008 POLR3AO14802 1390 aaPredicted RBP28.18■■■□□ 2.1
LYPD1-201ENST00000345008 COL14A1Q05707 1796 aaKnown RBP28.18■■■□□ 2.1
LYPD1-201ENST00000345008 ACEP12821 1306 aa28.17■■■□□ 2.1
LYPD1-201ENST00000345008 PLEKHG3A1L390 1219 aa28.15■■■□□ 2.1
LYPD1-201ENST00000345008 NRAPQ86VF7 1730 aa28.15■■■□□ 2.1
LYPD1-201ENST00000345008 NBPF8Q3BBV2 869 aa28.14■■■□□ 2.1
LYPD1-201ENST00000345008 BRWD3Q6RI45 1802 aa28.13■■■□□ 2.09
LYPD1-201ENST00000345008 BTG4Q9NY30 223 aa28.13■■■□□ 2.09
LYPD1-201ENST00000345008 ROCK2O75116 1388 aaKnown RBP28.12■■■□□ 2.09
LYPD1-201ENST00000345008 CABP2Q9NPB3 220 aa28.12■■■□□ 2.09
LYPD1-201ENST00000345008 PHRF1Q9P1Y6 1649 aaKnown RBP28.11■■■□□ 2.09
LYPD1-201ENST00000345008 PPIP5K1Q6PFW1 1433 aa28.11■■■□□ 2.09
LYPD1-201ENST00000345008 SEPT12Q8IYM1 358 aa28.1■■■□□ 2.09
LYPD1-201ENST00000345008 PRDM11Q9NQV5 511 aa28.1■■■□□ 2.09
LYPD1-201ENST00000345008 NUTM2GQ5VZR2 741 aa28.08■■■□□ 2.09
LYPD1-201ENST00000345008 CCDC125Q86Z20 511 aa28.06■■■□□ 2.08
LYPD1-201ENST00000345008 A0A0G2JS52 829 aa28.05■■■□□ 2.08
LYPD1-201ENST00000345008 ONECUT3O60422 494 aaPredicted RBP28.05■■■□□ 2.08
LYPD1-201ENST00000345008 MYT1Q01538 1121 aa28.05■■■□□ 2.08
LYPD1-201ENST00000345008 EVC2Q86UK5 1308 aa28.05■■■□□ 2.08
LYPD1-201ENST00000345008 ABTB2Q8N961 1025 aa28.05■■■□□ 2.08
LYPD1-201ENST00000345008 KIAA0232Q92628 1395 aa28.05■■■□□ 2.08
LYPD1-201ENST00000345008 ZC3H6P61129 1189 aaKnown RBP28.02■■■□□ 2.08
LYPD1-201ENST00000345008 BRD4O60885 1362 aaPredicted RBP28.01■■■□□ 2.07
LYPD1-201ENST00000345008 CHRNA2Q15822 529 aa28.01■■■□□ 2.07
LYPD1-201ENST00000345008 FAM98CQ17RN3 349 aaKnown RBP28.01■■■□□ 2.07
LYPD1-201ENST00000345008 CABP1Q9NZU7 370 aa28.01■■■□□ 2.07
LYPD1-201ENST00000345008 KRT27Q7Z3Y8 459 aa28■■■□□ 2.07
LYPD1-201ENST00000345008 TONSLQ96HA7 1378 aa27.99■■■□□ 2.07
LYPD1-201ENST00000345008 NRKQ7Z2Y5 1582 aa27.99■■■□□ 2.07
LYPD1-201ENST00000345008 SPATA31A5Q5VU36 1347 aa27.99■■■□□ 2.07
LYPD1-201ENST00000345008 SPATA31A7Q8IWB4 1347 aa27.99■■■□□ 2.07
LYPD1-201ENST00000345008 TRIM26Q12899 539 aaPredicted RBP27.99■■■□□ 2.07
LYPD1-201ENST00000345008 BLMP54132 1417 aaPredicted RBP27.99■■■□□ 2.07
LYPD1-201ENST00000345008 NLRP13Q86W25 1043 aa27.98■■■□□ 2.07
LYPD1-201ENST00000345008 USP19O94966 1318 aa27.97■■■□□ 2.07
LYPD1-201ENST00000345008 USP6P35125 1406 aa27.97■■■□□ 2.07
LYPD1-201ENST00000345008 STRN4Q9NRL3 753 aa27.95■■■□□ 2.06
LYPD1-201ENST00000345008 SF3B2Q13435 895 aaKnown RBP27.94■■■□□ 2.06
LYPD1-201ENST00000345008 CARD11Q9BXL7 1154 aa27.94■■■□□ 2.06
LYPD1-201ENST00000345008 CPDO75976 1380 aa27.93■■■□□ 2.06
LYPD1-201ENST00000345008 GCP02774 474 aa27.91■■■□□ 2.06
LYPD1-201ENST00000345008 SPATA31A1Q5TZJ5 1347 aa27.91■■■□□ 2.06
LYPD1-201ENST00000345008 THSD7AQ9UPZ6 1657 aa27.91■■■□□ 2.06
LYPD1-201ENST00000345008 EVA1CP58658 441 aa27.9■■■□□ 2.06
LYPD1-201ENST00000345008 NLRP6P59044 892 aa27.9■■■□□ 2.06
LYPD1-201ENST00000345008 AKAP12Q02952 1782 aa27.9■■■□□ 2.06
LYPD1-201ENST00000345008 ZRANB1Q9UGI0 708 aa27.89■■■□□ 2.06
LYPD1-201ENST00000345008 SBNO2Q9Y2G9 1366 aa27.88■■■□□ 2.05
LYPD1-201ENST00000345008 LMO7Q8WWI1 1683 aa27.88■■■□□ 2.05
LYPD1-201ENST00000345008 CAMTA1Q9Y6Y1 1673 aa27.88■■■□□ 2.05
LYPD1-201ENST00000345008 SSH2Q76I76 1423 aa27.88■■■□□ 2.05
LYPD1-201ENST00000345008 ZNF692Q9BU19 519 aaPredicted RBP27.88■■■□□ 2.05
LYPD1-201ENST00000345008 PIK3C2AO00443 1686 aa27.87■■■□□ 2.05
LYPD1-201ENST00000345008 USP35Q9P2H5 1018 aa27.85■■■□□ 2.05
LYPD1-201ENST00000345008 SLIT3O75094 1523 aa27.85■■■□□ 2.05
LYPD1-201ENST00000345008 DEFB132Q7Z7B7 95 aa27.84■■■□□ 2.05
LYPD1-201ENST00000345008 ZBTB7CA1YPR0 619 aa27.83■■■□□ 2.05
LYPD1-201ENST00000345008 LARP1Q6PKG0 1096 aaKnown RBP27.82■■■□□ 2.04
LYPD1-201ENST00000345008 TTC21BQ7Z4L5 1316 aa27.82■■■□□ 2.04
LYPD1-201ENST00000345008 FAM182BQ5T319 152 aa27.81■■■□□ 2.04
LYPD1-201ENST00000345008 KTN1Q86UP2 1357 aaKnown RBP27.81■■■□□ 2.04
LYPD1-201ENST00000345008 CPSF1Q10570 1443 aaKnown RBP27.81■■■□□ 2.04
LYPD1-201ENST00000345008 TTC21AQ8NDW8 1320 aa27.8■■■□□ 2.04
LYPD1-201ENST00000345008 RGPD1P0DJD0 1748 aa27.8■■■□□ 2.04
LYPD1-201ENST00000345008 COL5A2P05997 1499 aaPredicted RBP27.79■■■□□ 2.04
LYPD1-201ENST00000345008 BARGINQ6ZT62 677 aa27.79■■■□□ 2.04
LYPD1-201ENST00000345008 MON2Q7Z3U7 1717 aa27.78■■■□□ 2.04
LYPD1-201ENST00000345008 BAG6P46379 1132 aa27.78■■■□□ 2.04
LYPD1-201ENST00000345008 TCP11L2Q8N4U5 519 aa27.78■■■□□ 2.04
LYPD1-201ENST00000345008 AATKQ6ZMQ8 1374 aa27.77■■■□□ 2.04
LYPD1-201ENST00000345008 SRCAPQ6ZRS2 3230 aa27.77■■■□□ 2.04
LYPD1-201ENST00000345008 KCNH5Q8NCM2 988 aa27.75■■■□□ 2.03
LYPD1-201ENST00000345008 TMC1Q8TDI8 760 aa27.74■■■□□ 2.03
LYPD1-201ENST00000345008 THRAP3Q9Y2W1 955 aaKnown RBP27.74■■■□□ 2.03
LYPD1-201ENST00000345008 COL18A1P39060 1754 aa27.73■■■□□ 2.03
LYPD1-201ENST00000345008 PDE3BQ13370 1112 aa27.73■■■□□ 2.03
LYPD1-201ENST00000345008 CRB1P82279 1406 aa27.73■■■□□ 2.03
LYPD1-201ENST00000345008 SOX12O15370 315 aa27.72■■■□□ 2.03
LYPD1-201ENST00000345008 FAM196AQ6ZSG2 479 aa27.72■■■□□ 2.03
LYPD1-201ENST00000345008 HDGFL2Q7Z4V5 671 aaPredicted RBP27.71■■■□□ 2.03
LYPD1-201ENST00000345008 TNS1Q9HBL0 1735 aaKnown RBP27.7■■■□□ 2.03
LYPD1-201ENST00000345008 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.7■■■□□ 2.02
LYPD1-201ENST00000345008 ARHGEF25Q86VW2 580 aa27.69■■■□□ 2.02
LYPD1-201ENST00000345008 PARP4Q9UKK3 1724 aaKnown RBP27.69■■■□□ 2.02
LYPD1-201ENST00000345008 CD163L1Q9NR16 1453 aa27.69■■■□□ 2.02
LYPD1-201ENST00000345008 RGPD5Q99666 1765 aa27.68■■■□□ 2.02
LYPD1-201ENST00000345008 PUS7Q96PZ0 661 aaKnown RBP27.68■■■□□ 2.02
LYPD1-201ENST00000345008 TOM1L2Q6ZVM7 507 aa27.67■■■□□ 2.02
LYPD1-201ENST00000345008 SLC12A5Q9H2X9 1139 aa27.67■■■□□ 2.02
LYPD1-201ENST00000345008 NFAT5O94916 1531 aa27.67■■■□□ 2.02
LYPD1-201ENST00000345008 ST20-MTHFSA0A0A6YYL1 179 aa27.66■■■□□ 2.02
LYPD1-201ENST00000345008 EN1Q05925 392 aaPredicted RBP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms