RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 CRYBG1Q9Y4K1 1723 aa19.45■□□□□ 0.7
TPM4-202ENST00000344824 ACEP12821 1306 aa19.45■□□□□ 0.7
TPM4-202ENST00000344824 PHRF1Q9P1Y6 1649 aaKnown RBP19.44■□□□□ 0.7
TPM4-202ENST00000344824 AKAP12Q02952 1782 aa19.43■□□□□ 0.7
TPM4-202ENST00000344824 POLR3AO14802 1390 aaPredicted RBP19.41■□□□□ 0.7
TPM4-202ENST00000344824 USP21Q9UK80 565 aa19.41■□□□□ 0.7
TPM4-202ENST00000344824 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.4■□□□□ 0.7
TPM4-202ENST00000344824 NUTM2GQ5VZR2 741 aa19.4■□□□□ 0.7
TPM4-202ENST00000344824 PLEKHG3A1L390 1219 aa19.39■□□□□ 0.69
TPM4-202ENST00000344824 SBNO2Q9Y2G9 1366 aa19.38■□□□□ 0.69
TPM4-202ENST00000344824 CABP1Q9NZU7 370 aa19.38■□□□□ 0.69
TPM4-202ENST00000344824 NWD2Q9ULI1 1742 aa19.38■□□□□ 0.69
TPM4-202ENST00000344824 ATAD2Q6PL18 1390 aa19.37■□□□□ 0.69
TPM4-202ENST00000344824 RXRBP28702 533 aa19.37■□□□□ 0.69
TPM4-202ENST00000344824 QTRT2Q9H974 415 aaKnown RBP19.37■□□□□ 0.69
TPM4-202ENST00000344824 USP47Q96K76 1375 aa19.36■□□□□ 0.69
TPM4-202ENST00000344824 COL14A1Q05707 1796 aaKnown RBP19.36■□□□□ 0.69
TPM4-202ENST00000344824 MON2Q7Z3U7 1717 aa19.36■□□□□ 0.69
TPM4-202ENST00000344824 ST20-MTHFSA0A0A6YYL1 179 aa19.34■□□□□ 0.69
TPM4-202ENST00000344824 USP6P35125 1406 aa19.34■□□□□ 0.69
TPM4-202ENST00000344824 NRKQ7Z2Y5 1582 aa19.34■□□□□ 0.69
TPM4-202ENST00000344824 PIK3C2AO00443 1686 aa19.34■□□□□ 0.69
TPM4-202ENST00000344824 TRPC5Q9UL62 973 aaPredicted RBP19.34■□□□□ 0.69
TPM4-202ENST00000344824 NRAPQ86VF7 1730 aa19.33■□□□□ 0.69
TPM4-202ENST00000344824 SLIT2O94813 1529 aa19.33■□□□□ 0.68
TPM4-202ENST00000344824 BCL9LQ86UU0 1499 aa19.33■□□□□ 0.68
TPM4-202ENST00000344824 FNBP4Q8N3X1 1017 aaPredicted RBP19.33■□□□□ 0.68
TPM4-202ENST00000344824 ABTB2Q8N961 1025 aa19.33■□□□□ 0.68
TPM4-202ENST00000344824 TMC1Q8TDI8 760 aa19.33■□□□□ 0.68
TPM4-202ENST00000344824 RGS12O14924 1447 aa19.33■□□□□ 0.68
TPM4-202ENST00000344824 ATRNO75882 1429 aa19.33■□□□□ 0.68
TPM4-202ENST00000344824 RBM6P78332 1123 aaKnown RBP19.32■□□□□ 0.68
TPM4-202ENST00000344824 CDK12Q9NYV4 1490 aaPredicted RBP19.3■□□□□ 0.68
TPM4-202ENST00000344824 CCDC9Q9Y3X0 531 aaKnown RBP19.29■□□□□ 0.68
TPM4-202ENST00000344824 KTN1Q86UP2 1357 aaKnown RBP19.29■□□□□ 0.68
TPM4-202ENST00000344824 UNC5CLQ8IV45 518 aa19.28■□□□□ 0.68
TPM4-202ENST00000344824 PRDM11Q9NQV5 511 aa19.28■□□□□ 0.68
TPM4-202ENST00000344824 GLI3P10071 1580 aa19.28■□□□□ 0.68
TPM4-202ENST00000344824 BRD4O60885 1362 aaPredicted RBP19.27■□□□□ 0.68
TPM4-202ENST00000344824 KIAA0232Q92628 1395 aa19.27■□□□□ 0.68
TPM4-202ENST00000344824 ZBTB7CA1YPR0 619 aa19.27■□□□□ 0.68
TPM4-202ENST00000344824 ZC3H6P61129 1189 aaKnown RBP19.27■□□□□ 0.68
TPM4-202ENST00000344824 FAM83GA6ND36 823 aa19.26■□□□□ 0.67
TPM4-202ENST00000344824 TESK2Q96S53 571 aa19.26■□□□□ 0.67
TPM4-202ENST00000344824 NLRP13Q86W25 1043 aa19.25■□□□□ 0.67
TPM4-202ENST00000344824 BTG4Q9NY30 223 aa19.25■□□□□ 0.67
TPM4-202ENST00000344824 NLRP6P59044 892 aa19.25■□□□□ 0.67
TPM4-202ENST00000344824 CHRNA2Q15822 529 aa19.25■□□□□ 0.67
TPM4-202ENST00000344824 HDGFL2Q7Z4V5 671 aaPredicted RBP19.25■□□□□ 0.67
TPM4-202ENST00000344824 CPSF1Q10570 1443 aaKnown RBP19.25■□□□□ 0.67
TPM4-202ENST00000344824 TTC21BQ7Z4L5 1316 aa19.24■□□□□ 0.67
TPM4-202ENST00000344824 BRWD3Q6RI45 1802 aa19.24■□□□□ 0.67
TPM4-202ENST00000344824 TMF1P82094 1093 aa19.24■□□□□ 0.67
TPM4-202ENST00000344824 ZNF692Q9BU19 519 aaPredicted RBP19.24■□□□□ 0.67
TPM4-202ENST00000344824 CD163L1Q9NR16 1453 aa19.23■□□□□ 0.67
TPM4-202ENST00000344824 USP19O94966 1318 aa19.23■□□□□ 0.67
TPM4-202ENST00000344824 SSH2Q76I76 1423 aa19.23■□□□□ 0.67
TPM4-202ENST00000344824 POTEDQ86YR6 584 aa19.23■□□□□ 0.67
TPM4-202ENST00000344824 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.23■□□□□ 0.67
TPM4-202ENST00000344824 GJD4Q96KN9 370 aaPredicted RBP19.23■□□□□ 0.67
TPM4-202ENST00000344824 SLC12A5Q9H2X9 1139 aa19.23■□□□□ 0.67
TPM4-202ENST00000344824 SLIT3O75094 1523 aa19.23■□□□□ 0.67
TPM4-202ENST00000344824 SOX12O15370 315 aa19.22■□□□□ 0.67
TPM4-202ENST00000344824 A0A1W2PP64 1363 aa19.22■□□□□ 0.67
TPM4-202ENST00000344824 MYOM1P52179 1685 aa19.21■□□□□ 0.67
TPM4-202ENST00000344824 A0A0G2JS52 829 aa19.21■□□□□ 0.67
TPM4-202ENST00000344824 HSPA5P11021 654 aaKnown RBP19.21■□□□□ 0.67
TPM4-202ENST00000344824 EIF4G2P78344 907 aaKnown RBP eCLIP19.21■□□□□ 0.673e-9■■■□□ 15.5
TPM4-202ENST00000344824 MYT1Q01538 1121 aa19.21■□□□□ 0.67
TPM4-202ENST00000344824 SLC24A1O60721 1099 aa19.2■□□□□ 0.66
TPM4-202ENST00000344824 STRN4Q9NRL3 753 aa19.2■□□□□ 0.66
TPM4-202ENST00000344824 TERF2IPQ9NYB0 399 aa19.2■□□□□ 0.66
TPM4-202ENST00000344824 TTC21AQ8NDW8 1320 aa19.2■□□□□ 0.66
TPM4-202ENST00000344824 LMO7Q8WWI1 1683 aa19.2■□□□□ 0.66
TPM4-202ENST00000344824 RGPD5Q99666 1765 aa19.2■□□□□ 0.66
TPM4-202ENST00000344824 VPS72Q15906 364 aa19.19■□□□□ 0.66
TPM4-202ENST00000344824 LTN1O94822 1766 aa19.19■□□□□ 0.66
TPM4-202ENST00000344824 USP54Q70EL1 1684 aa19.19■□□□□ 0.66
TPM4-202ENST00000344824 GCP02774 474 aa19.18■□□□□ 0.66
TPM4-202ENST00000344824 NINLQ9Y2I6 1382 aa19.18■□□□□ 0.66
TPM4-202ENST00000344824 EDC4Q6P2E9 1401 aaKnown RBP19.18■□□□□ 0.66
TPM4-202ENST00000344824 POLR3GLQ9BT43 218 aa19.17■□□□□ 0.66
TPM4-202ENST00000344824 KIF20BQ96Q89 1820 aa19.17■□□□□ 0.66
TPM4-202ENST00000344824 ZNF316A6NFI3 1004 aaPredicted RBP19.17■□□□□ 0.66
TPM4-202ENST00000344824 PUS7Q96PZ0 661 aaKnown RBP19.17■□□□□ 0.66
TPM4-202ENST00000344824 CPDO75976 1380 aa19.16■□□□□ 0.66
TPM4-202ENST00000344824 NME9Q86XW9 330 aa19.16■□□□□ 0.66
TPM4-202ENST00000344824 CAMTA1Q9Y6Y1 1673 aa19.15■□□□□ 0.66
TPM4-202ENST00000344824 CDCA8Q53HL2 280 aa19.15■□□□□ 0.66
TPM4-202ENST00000344824 ZRANB1Q9UGI0 708 aa19.15■□□□□ 0.66
TPM4-202ENST00000344824 NFAT5O94916 1531 aa19.14■□□□□ 0.65
TPM4-202ENST00000344824 COL18A1P39060 1754 aa19.13■□□□□ 0.65
TPM4-202ENST00000344824 ANKRD36BQ8N2N9 1353 aa19.13■□□□□ 0.65
TPM4-202ENST00000344824 EVA1CP58658 441 aa19.13■□□□□ 0.65
TPM4-202ENST00000344824 FAM98CQ17RN3 349 aaKnown RBP19.13■□□□□ 0.65
TPM4-202ENST00000344824 USP35Q9P2H5 1018 aa19.13■□□□□ 0.65
TPM4-202ENST00000344824 SEPT12Q8IYM1 358 aa19.12■□□□□ 0.65
TPM4-202ENST00000344824 KCNH5Q8NCM2 988 aa19.11■□□□□ 0.65
TPM4-202ENST00000344824 COL5A2P05997 1499 aaPredicted RBP19.11■□□□□ 0.65
TPM4-202ENST00000344824 SPATA31A5Q5VU36 1347 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms