RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 MST1RQ04912 1400 aa22.1■■□□□ 1.13
CEACAM1-202ENST00000344391 ESCO1Q5FWF5 840 aa22.09■■□□□ 1.13
CEACAM1-202ENST00000344391 CADPS2Q86UW7 1296 aa22.09■■□□□ 1.13
CEACAM1-202ENST00000344391 TTC21BQ7Z4L5 1316 aa22.09■■□□□ 1.13
CEACAM1-202ENST00000344391 ORAI2Q96SN7 254 aa22.07■■□□□ 1.12
CEACAM1-202ENST00000344391 AEBP2Q6ZN18 517 aaPredicted RBP22.06■■□□□ 1.12
CEACAM1-202ENST00000344391 NME9Q86XW9 330 aa22.06■■□□□ 1.12
CEACAM1-202ENST00000344391 KIF1AQ12756 1690 aa22.06■■□□□ 1.12
CEACAM1-202ENST00000344391 YTHDC1Q96MU7 727 aaKnown RBP22.05■■□□□ 1.12
CEACAM1-202ENST00000344391 TTC21AQ8NDW8 1320 aa22.05■■□□□ 1.12
CEACAM1-202ENST00000344391 LTBP4Q8N2S1 1624 aa22.04■■□□□ 1.12
CEACAM1-202ENST00000344391 TNNT2P45379 298 aaPredicted RBP22.03■■□□□ 1.12
CEACAM1-202ENST00000344391 PNISRQ8TF01 805 aaKnown RBP22.03■■□□□ 1.12
CEACAM1-202ENST00000344391 ZRANB1Q9UGI0 708 aa22.02■■□□□ 1.11
CEACAM1-202ENST00000344391 SCAF1Q9H7N4 1312 aaKnown RBP22■■□□□ 1.11
CEACAM1-202ENST00000344391 FAM9BQ8IZU0 186 aa22■■□□□ 1.11
CEACAM1-202ENST00000344391 COG3Q96JB2 828 aa22■■□□□ 1.11
CEACAM1-202ENST00000344391 PIK3C2AO00443 1686 aa22■■□□□ 1.11
CEACAM1-202ENST00000344391 OVOS2A0A0J9YW53 1432 aa21.99■■□□□ 1.11
CEACAM1-202ENST00000344391 OVOS2Q6IE36 1432 aa21.99■■□□□ 1.11
CEACAM1-202ENST00000344391 FOXO3O43524 673 aa21.98■■□□□ 1.11
CEACAM1-202ENST00000344391 PSME1Q06323 249 aa21.98■■□□□ 1.11
CEACAM1-202ENST00000344391 USP31Q70CQ4 1352 aa21.98■■□□□ 1.11
CEACAM1-202ENST00000344391 MAP2P11137 1827 aaKnown RBP21.97■■□□□ 1.11
CEACAM1-202ENST00000344391 USP54Q70EL1 1684 aa21.97■■□□□ 1.11
CEACAM1-202ENST00000344391 MTHFSP49914 203 aa21.96■■□□□ 1.11
CEACAM1-202ENST00000344391 SLAIN2Q9P270 581 aa21.95■■□□□ 1.1
CEACAM1-202ENST00000344391 TRPM3Q9HCF6 1732 aaPredicted RBP21.95■■□□□ 1.1
CEACAM1-202ENST00000344391 AATKQ6ZMQ8 1374 aa21.94■■□□□ 1.1
CEACAM1-202ENST00000344391 MARF1Q9Y4F3 1742 aaKnown RBP21.94■■□□□ 1.1
CEACAM1-202ENST00000344391 PAK3O75914 559 aaPredicted RBP21.94■■□□□ 1.1
CEACAM1-202ENST00000344391 KRT28Q7Z3Y7 464 aa21.93■■□□□ 1.1
CEACAM1-202ENST00000344391 BRINP3Q76B58 766 aa21.91■■□□□ 1.1
CEACAM1-202ENST00000344391 ABTB2Q8N961 1025 aa21.91■■□□□ 1.1
CEACAM1-202ENST00000344391 FBLN1P23142 703 aa21.91■■□□□ 1.1
CEACAM1-202ENST00000344391 NLRP6P59044 892 aa21.91■■□□□ 1.1
CEACAM1-202ENST00000344391 XPCQ01831 940 aaPredicted RBP21.91■■□□□ 1.1
CEACAM1-202ENST00000344391 POLKQ9UBT6 870 aa21.91■■□□□ 1.1
CEACAM1-202ENST00000344391 NPHP3Q7Z494 1330 aa21.9■■□□□ 1.1
CEACAM1-202ENST00000344391 CFAP53Q96M91 514 aa21.9■■□□□ 1.1
CEACAM1-202ENST00000344391 SMG6Q86US8 1419 aaKnown RBP21.89■■□□□ 1.09
CEACAM1-202ENST00000344391 SHPRHQ149N8 1683 aa21.89■■□□□ 1.09
CEACAM1-202ENST00000344391 PNPLA6Q8IY17 1366 aa21.88■■□□□ 1.09
CEACAM1-202ENST00000344391 ALS2Q96Q42 1657 aa21.87■■□□□ 1.09
CEACAM1-202ENST00000344391 INSRP06213 1382 aa21.87■■□□□ 1.09
CEACAM1-202ENST00000344391 NUTM2GQ5VZR2 741 aa21.87■■□□□ 1.09
CEACAM1-202ENST00000344391 DDX17Q92841 729 aaKnown RBP21.87■■□□□ 1.09
CEACAM1-202ENST00000344391 COL3A1P02461 1466 aaPredicted RBP21.87■■□□□ 1.09
CEACAM1-202ENST00000344391 PXDNQ92626 1479 aa21.87■■□□□ 1.09
CEACAM1-202ENST00000344391 WDR43Q15061 677 aaKnown RBP eCLIP21.86■■□□□ 1.09
CEACAM1-202ENST00000344391 EMILIN1Q9Y6C2 1016 aa21.86■■□□□ 1.09
CEACAM1-202ENST00000344391 SBNO1A3KN83 1393 aa21.86■■□□□ 1.09
CEACAM1-202ENST00000344391 ADAMTS8Q9UP79 889 aa21.85■■□□□ 1.09
CEACAM1-202ENST00000344391 HNRNPUQ00839 825 aaKnown RBP eCLIP21.84■■□□□ 1.09
CEACAM1-202ENST00000344391 RRS1Q15050 365 aaKnown RBP21.84■■□□□ 1.09
CEACAM1-202ENST00000344391 CDK12Q9NYV4 1490 aaPredicted RBP21.84■■□□□ 1.09
CEACAM1-202ENST00000344391 NHSL1Q5SYE7 1610 aa21.82■■□□□ 1.08
CEACAM1-202ENST00000344391 PPM1GO15355 546 aaPredicted RBP21.82■■□□□ 1.08
CEACAM1-202ENST00000344391 BLMP54132 1417 aaPredicted RBP21.82■■□□□ 1.08
CEACAM1-202ENST00000344391 PEAK1Q9H792 1746 aa21.81■■□□□ 1.08
CEACAM1-202ENST00000344391 SOS2Q07890 1332 aaPredicted RBP21.8■■□□□ 1.08
CEACAM1-202ENST00000344391 SOX12O15370 315 aa21.8■■□□□ 1.08
CEACAM1-202ENST00000344391 SLIT3O75094 1523 aa21.8■■□□□ 1.08
CEACAM1-202ENST00000344391 TNS3Q68CZ2 1445 aa21.8■■□□□ 1.08
CEACAM1-202ENST00000344391 LMOD2Q6P5Q4 547 aa21.8■■□□□ 1.08
CEACAM1-202ENST00000344391 USP19O94966 1318 aa21.79■■□□□ 1.08
CEACAM1-202ENST00000344391 MAP3K19Q56UN5 1328 aa21.79■■□□□ 1.08
CEACAM1-202ENST00000344391 SPATA31A3Q5VYP0 1347 aa21.79■■□□□ 1.08
CEACAM1-202ENST00000344391 DIAPH1O60610 1272 aaKnown RBP21.79■■□□□ 1.08
CEACAM1-202ENST00000344391 CENPBP07199 599 aaPredicted RBP21.79■■□□□ 1.08
CEACAM1-202ENST00000344391 NFAT5O94916 1531 aa21.79■■□□□ 1.08
CEACAM1-202ENST00000344391 ROBO1Q9Y6N7 1651 aa21.78■■□□□ 1.08
CEACAM1-202ENST00000344391 KCNH5Q8NCM2 988 aa21.77■■□□□ 1.08
CEACAM1-202ENST00000344391 NUDCQ9Y266 331 aa21.77■■□□□ 1.08
CEACAM1-202ENST00000344391 LTN1O94822 1766 aa21.76■■□□□ 1.07
CEACAM1-202ENST00000344391 MED1Q15648 1581 aaPredicted RBP21.75■■□□□ 1.07
CEACAM1-202ENST00000344391 KIF24Q5T7B8 1368 aa21.75■■□□□ 1.07
CEACAM1-202ENST00000344391 ARHGEF10O15013 1369 aa21.75■■□□□ 1.07
CEACAM1-202ENST00000344391 GCP02774 474 aa21.74■■□□□ 1.07
CEACAM1-202ENST00000344391 FLT4P35916 1363 aa21.74■■□□□ 1.07
CEACAM1-202ENST00000344391 IQSEC2Q5JU85 1478 aa21.74■■□□□ 1.07
CEACAM1-202ENST00000344391 ZBED9Q6R2W3 1325 aa21.74■■□□□ 1.07
CEACAM1-202ENST00000344391 IL13P35225 146 aa21.73■■□□□ 1.07
CEACAM1-202ENST00000344391 CRYBG1Q9Y4K1 1723 aa21.73■■□□□ 1.07
CEACAM1-202ENST00000344391 U2AF1L5P0DN76 240 aaPredicted RBP21.73■■□□□ 1.07
CEACAM1-202ENST00000344391 U2AF1Q01081 240 aaKnown RBP eCLIP21.73■■□□□ 1.07
CEACAM1-202ENST00000344391 AHDC1Q5TGY3 1603 aaPredicted RBP21.72■■□□□ 1.07
CEACAM1-202ENST00000344391 PHRF1Q9P1Y6 1649 aaKnown RBP21.72■■□□□ 1.07
CEACAM1-202ENST00000344391 U2SURPO15042 1029 aaKnown RBP21.72■■□□□ 1.07
CEACAM1-202ENST00000344391 TOM1O60784 492 aa21.72■■□□□ 1.07
CEACAM1-202ENST00000344391 AMPHP49418 695 aa21.72■■□□□ 1.07
CEACAM1-202ENST00000344391 HSP90AB2PQ58FF8 381 aa21.72■■□□□ 1.07
CEACAM1-202ENST00000344391 RTL1A6NKG5 1358 aa21.7■■□□□ 1.06
CEACAM1-202ENST00000344391 HOXC9P31274 260 aa21.69■■□□□ 1.06
CEACAM1-202ENST00000344391 EIF4A2Q14240 407 aaKnown RBP21.69■■□□□ 1.06
CEACAM1-202ENST00000344391 CCDC146Q8IYE0 955 aa21.69■■□□□ 1.06
CEACAM1-202ENST00000344391 SENP3-EIF4A1A0A087X0R7 540 aa21.68■■□□□ 1.06
CEACAM1-202ENST00000344391 PLEKHG5O94827 1062 aa21.68■■□□□ 1.06
CEACAM1-202ENST00000344391 ARHGEF25Q86VW2 580 aa21.68■■□□□ 1.06
CEACAM1-202ENST00000344391 IP6K1Q92551 441 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms