RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 HSP90AB4PQ58FF6 505 aa14.52□□□□□ -0.08
SEMA6A-202ENST00000343348 VGFO15240 615 aaPredicted RBP14.52□□□□□ -0.09
SEMA6A-202ENST00000343348 CABP2Q9NPB3 220 aa14.52□□□□□ -0.09
SEMA6A-202ENST00000343348 CDK5RAP3Q96JB5 506 aa14.51□□□□□ -0.09
SEMA6A-202ENST00000343348 AEBP2Q6ZN18 517 aaPredicted RBP14.51□□□□□ -0.09
SEMA6A-202ENST00000343348 MYO6Q9UM54 1294 aa14.51□□□□□ -0.09
SEMA6A-202ENST00000343348 UACAQ9BZF9 1416 aa14.51□□□□□ -0.09
SEMA6A-202ENST00000343348 KIF7Q2M1P5 1343 aa14.5□□□□□ -0.09
SEMA6A-202ENST00000343348 RAPGEF2Q9Y4G8 1499 aa14.5□□□□□ -0.09
SEMA6A-202ENST00000343348 STK38Q15208 465 aa14.5□□□□□ -0.09
SEMA6A-202ENST00000343348 ENOX2Q16206 610 aaKnown RBP14.49□□□□□ -0.09
SEMA6A-202ENST00000343348 TNMDQ9H2S6 317 aa14.49□□□□□ -0.09
SEMA6A-202ENST00000343348 ZHX3Q9H4I2 956 aa14.49□□□□□ -0.09
SEMA6A-202ENST00000343348 TAX1BP1Q86VP1 789 aa14.49□□□□□ -0.09
SEMA6A-202ENST00000343348 MBD3O95983 291 aa14.48□□□□□ -0.09
SEMA6A-202ENST00000343348 KRT18P05783 430 aaKnown RBP14.48□□□□□ -0.09
SEMA6A-202ENST00000343348 GRPEL1Q9HAV7 217 aa14.48□□□□□ -0.09
SEMA6A-202ENST00000343348 NOB1Q9ULX3 412 aaKnown RBP14.48□□□□□ -0.09
SEMA6A-202ENST00000343348 BCAR3O75815 825 aa14.48□□□□□ -0.09
SEMA6A-202ENST00000343348 SYCP1Q15431 976 aa14.48□□□□□ -0.09
SEMA6A-202ENST00000343348 PRDM10Q9NQV6 1147 aa14.48□□□□□ -0.09
SEMA6A-202ENST00000343348 CLASRPQ8N2M8 674 aaKnown RBP14.48□□□□□ -0.09
SEMA6A-202ENST00000343348 NACADO15069 1562 aa14.48□□□□□ -0.09
SEMA6A-202ENST00000343348 PAF1Q8N7H5 531 aa14.47□□□□□ -0.09
SEMA6A-202ENST00000343348 SIL1Q9H173 461 aa14.47□□□□□ -0.09
SEMA6A-202ENST00000343348 CCDC7Q96M83 1385 aa14.47□□□□□ -0.09
SEMA6A-202ENST00000343348 ATP2B2Q01814 1243 aa14.47□□□□□ -0.09
SEMA6A-202ENST00000343348 CCDC181Q5TID7 509 aa14.47□□□□□ -0.09
SEMA6A-202ENST00000343348 DEF6Q9H4E7 631 aa14.47□□□□□ -0.09
SEMA6A-202ENST00000343348 AKNAQ7Z591 1439 aa14.47□□□□□ -0.09
SEMA6A-202ENST00000343348 KIAA0754O94854 1291 aa14.47□□□□□ -0.09
SEMA6A-202ENST00000343348 ME1P48163 572 aa14.47□□□□□ -0.09
SEMA6A-202ENST00000343348 SEPT7Q16181 437 aaKnown RBP14.47□□□□□ -0.09
SEMA6A-202ENST00000343348 GOLGA6L10A6NI86 522 aa14.47□□□□□ -0.09
SEMA6A-202ENST00000343348 TANGO6Q9C0B7 1094 aa14.47□□□□□ -0.09
SEMA6A-202ENST00000343348 CCDC112Q8NEF3 446 aa14.46□□□□□ -0.09
SEMA6A-202ENST00000343348 ZNF396Q96N95 335 aaPredicted RBP14.46□□□□□ -0.09
SEMA6A-202ENST00000343348 MTHFSP49914 203 aa14.46□□□□□ -0.09
SEMA6A-202ENST00000343348 EXOSC9Q06265 439 aaKnown RBP14.46□□□□□ -0.09
SEMA6A-202ENST00000343348 CCAR1Q8IX12 1150 aaKnown RBP14.46□□□□□ -0.09
SEMA6A-202ENST00000343348 TSR2Q969E8 191 aaKnown RBP14.46□□□□□ -0.09
SEMA6A-202ENST00000343348 IBSPP21815 317 aaPredicted RBP14.46□□□□□ -0.09
SEMA6A-202ENST00000343348 SART3Q15020 963 aaKnown RBP14.46□□□□□ -0.09
SEMA6A-202ENST00000343348 PPFIBP1Q86W92 1011 aa14.46□□□□□ -0.09
SEMA6A-202ENST00000343348 CCP110O43303 1012 aa14.46□□□□□ -0.1
SEMA6A-202ENST00000343348 TMEM132EQ6IEE7 984 aa14.45□□□□□ -0.1
SEMA6A-202ENST00000343348 CCDC192P0DO97 292 aa14.45□□□□□ -0.1
SEMA6A-202ENST00000343348 RAPGEF4Q8WZA2 1011 aa14.45□□□□□ -0.1
SEMA6A-202ENST00000343348 RSPH4AQ5TD94 716 aa14.45□□□□□ -0.1
SEMA6A-202ENST00000343348 TXLNAP40222 546 aa14.45□□□□□ -0.1
SEMA6A-202ENST00000343348 HMGN5P82970 282 aaKnown RBP14.45□□□□□ -0.1
SEMA6A-202ENST00000343348 ZNHIT6Q9NWK9 470 aaKnown RBP14.44□□□□□ -0.1
SEMA6A-202ENST00000343348 TTC39AQ5SRH9 613 aa14.44□□□□□ -0.1
SEMA6A-202ENST00000343348 NLRP2Q9NX02 1062 aa14.44□□□□□ -0.1
SEMA6A-202ENST00000343348 TBC1D2BQ9UPU7 963 aa14.44□□□□□ -0.1
SEMA6A-202ENST00000343348 LRRFIP2Q9Y608 721 aaKnown RBP14.44□□□□□ -0.1
SEMA6A-202ENST00000343348 WIZO95785 1651 aa14.44□□□□□ -0.1
SEMA6A-202ENST00000343348 CNTLNQ9NXG0 1405 aa14.44□□□□□ -0.1
SEMA6A-202ENST00000343348 ERLIN2O94905 339 aa14.44□□□□□ -0.1
SEMA6A-202ENST00000343348 RABEP1Q15276 862 aa14.43□□□□□ -0.1
SEMA6A-202ENST00000343348 TCP11L2Q8N4U5 519 aa14.43□□□□□ -0.1
SEMA6A-202ENST00000343348 SEPT11Q9NVA2 429 aaKnown RBP14.43□□□□□ -0.1
SEMA6A-202ENST00000343348 MROH2BQ7Z745 1585 aa14.43□□□□□ -0.1
SEMA6A-202ENST00000343348 PIBF1Q8WXW3 757 aa14.43□□□□□ -0.1
SEMA6A-202ENST00000343348 TAF3Q5VWG9 929 aa14.42□□□□□ -0.1
SEMA6A-202ENST00000343348 PRDM2Q13029 1718 aa14.42□□□□□ -0.1
SEMA6A-202ENST00000343348 CCDC102AQ96A19 550 aa14.42□□□□□ -0.1
SEMA6A-202ENST00000343348 K7ELQ4 463 aaPredicted RBP14.42□□□□□ -0.1
SEMA6A-202ENST00000343348 PDCP20941 246 aa14.42□□□□□ -0.1
SEMA6A-202ENST00000343348 FILIP1Q7Z7B0 1213 aa14.42□□□□□ -0.1
SEMA6A-202ENST00000343348 NUP133Q8WUM0 1156 aa14.42□□□□□ -0.1
SEMA6A-202ENST00000343348 CCDC30Q5VVM6 783 aa14.42□□□□□ -0.1
SEMA6A-202ENST00000343348 PDCL3Q9H2J4 239 aa14.42□□□□□ -0.1
SEMA6A-202ENST00000343348 CYP46A1Q9Y6A2 500 aa14.41□□□□□ -0.1
SEMA6A-202ENST00000343348 CAMK4Q16566 473 aa14.41□□□□□ -0.1
SEMA6A-202ENST00000343348 PODXL2Q9NZ53 605 aa14.41□□□□□ -0.1
SEMA6A-202ENST00000343348 LARP1BQ659C4 914 aaKnown RBP14.41□□□□□ -0.1
SEMA6A-202ENST00000343348 PPP1R1BQ9UD71 204 aaPredicted RBP14.41□□□□□ -0.1
SEMA6A-202ENST00000343348 WASHC2AQ641Q2 1341 aa14.4□□□□□ -0.1
SEMA6A-202ENST00000343348 CBX1P83916 185 aa14.4□□□□□ -0.1
SEMA6A-202ENST00000343348 CNNM1Q9NRU3 951 aa14.4□□□□□ -0.1
SEMA6A-202ENST00000343348 GNAI2P04899 355 aa14.4□□□□□ -0.1
SEMA6A-202ENST00000343348 MCM2P49736 904 aa14.4□□□□□ -0.1
SEMA6A-202ENST00000343348 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
SEMA6A-202ENST00000343348 TWISTNBQ3B726 338 aaPredicted RBP14.4□□□□□ -0.11
SEMA6A-202ENST00000343348 PRKAR2BP31323 418 aa14.39□□□□□ -0.11
SEMA6A-202ENST00000343348 JPH4Q96JJ6 628 aa14.39□□□□□ -0.11
SEMA6A-202ENST00000343348 RBM42Q9BTD8 480 aaKnown RBP14.39□□□□□ -0.11
SEMA6A-202ENST00000343348 TMX1Q9H3N1 280 aa14.39□□□□□ -0.11
SEMA6A-202ENST00000343348 RUSC2Q8N2Y8 1516 aa14.39□□□□□ -0.11
SEMA6A-202ENST00000343348 GNAI3P08754 354 aa14.39□□□□□ -0.11
SEMA6A-202ENST00000343348 ZRSR2Q15696 482 aaKnown RBP14.39□□□□□ -0.11
SEMA6A-202ENST00000343348 SLC4A2P04920 1241 aa14.38□□□□□ -0.11
SEMA6A-202ENST00000343348 CCDC69A6NI79 296 aa14.38□□□□□ -0.11
SEMA6A-202ENST00000343348 LRRCC1Q9C099 1032 aa14.38□□□□□ -0.11
SEMA6A-202ENST00000343348 SYCE3A1L190 88 aa14.38□□□□□ -0.11
SEMA6A-202ENST00000343348 SPATA32Q96LK8 384 aa14.38□□□□□ -0.11
SEMA6A-202ENST00000343348 CWC27Q6UX04 472 aaKnown RBP14.37□□□□□ -0.11
SEMA6A-202ENST00000343348 TRERF1Q96PN7 1200 aa14.37□□□□□ -0.11
SEMA6A-202ENST00000343348 KRT85P78386 507 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms