RNA–Protein interactions for RNA: ENST00000341400.11

NPIPB4-202, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-202ENST00000341400 NR1I2O75469 434 aa11.22□□□□□ -0.61
NPIPB4-202ENST00000341400 JUNDP17535 347 aa11.22□□□□□ -0.61
NPIPB4-202ENST00000341400 PTPRNQ16849 979 aa11.22□□□□□ -0.61
NPIPB4-202ENST00000341400 HPS5Q9UPZ3 1129 aa11.22□□□□□ -0.61
NPIPB4-202ENST00000341400 PCDHB3Q9Y5E6 796 aa11.22□□□□□ -0.61
NPIPB4-202ENST00000341400 TMEM88BA6NKF7 163 aa11.21□□□□□ -0.61
NPIPB4-202ENST00000341400 APLP1P51693 650 aa11.21□□□□□ -0.61
NPIPB4-202ENST00000341400 LSM11P83369 360 aaKnown RBP eCLIP11.21□□□□□ -0.611e-6■■■■□ 21.8
NPIPB4-202ENST00000341400 NFATC2IPQ8NCF5 419 aa11.21□□□□□ -0.61
NPIPB4-202ENST00000341400 STAC3Q96MF2 364 aa11.21□□□□□ -0.61
NPIPB4-202ENST00000341400 SOWAHBA6NEL2 793 aa11.2□□□□□ -0.62
NPIPB4-202ENST00000341400 THAP11Q96EK4 314 aa11.2□□□□□ -0.62
NPIPB4-202ENST00000341400 MAP10Q9P2G4 905 aa11.2□□□□□ -0.62
NPIPB4-202ENST00000341400 HRO43593 1189 aa11.19□□□□□ -0.62
NPIPB4-202ENST00000341400 CTHP32929 405 aa11.19□□□□□ -0.62
NPIPB4-202ENST00000341400 HS3ST6Q96QI5 342 aa11.19□□□□□ -0.62
NPIPB4-202ENST00000341400 TSR3Q9UJK0 312 aaKnown RBP11.19□□□□□ -0.62
NPIPB4-202ENST00000341400 MTMR7Q9Y216 660 aa11.19□□□□□ -0.62
NPIPB4-202ENST00000341400 PIK3CDO00329 1044 aa11.18□□□□□ -0.62
NPIPB4-202ENST00000341400 KANK4Q5T7N3 995 aaPredicted RBP11.18□□□□□ -0.62
NPIPB4-202ENST00000341400 SKIP12755 728 aa11.17□□□□□ -0.62
NPIPB4-202ENST00000341400 BCAMP50895 628 aa11.17□□□□□ -0.62
NPIPB4-202ENST00000341400 ELOAQ14241 798 aaKnown RBP11.17□□□□□ -0.62
NPIPB4-202ENST00000341400 ZNF592Q92610 1267 aa11.17□□□□□ -0.62
NPIPB4-202ENST00000341400 IVNS1ABPQ9Y6Y0 642 aa11.17□□□□□ -0.62
NPIPB4-202ENST00000341400 B4GALNT3Q6L9W6 998 aa11.16□□□□□ -0.62
NPIPB4-202ENST00000341400 USP17L3A6NCW0 530 aa11.15□□□□□ -0.62
NPIPB4-202ENST00000341400 USP17L4A6NCW7 530 aa11.15□□□□□ -0.62
NPIPB4-202ENST00000341400 USP17L2Q6R6M4 530 aa11.15□□□□□ -0.62
NPIPB4-202ENST00000341400 USP17L1Q7RTZ2 530 aa11.15□□□□□ -0.62
NPIPB4-202ENST00000341400 PLEKHM2Q8IWE5 1019 aa11.15□□□□□ -0.62
NPIPB4-202ENST00000341400 ARMC2Q8NEN0 867 aa11.15□□□□□ -0.62
NPIPB4-202ENST00000341400 GPSM3Q9Y4H4 160 aa11.15□□□□□ -0.62
NPIPB4-202ENST00000341400 POTEB3A0JP26 581 aa11.14□□□□□ -0.63
NPIPB4-202ENST00000341400 USP17L5A8MUK1 530 aa11.14□□□□□ -0.63
NPIPB4-202ENST00000341400 CCNYL3P0C7X3 344 aa11.14□□□□□ -0.63
NPIPB4-202ENST00000341400 PTK2Q05397 1052 aa11.14□□□□□ -0.63
NPIPB4-202ENST00000341400 MSS51Q4VC12 460 aa11.14□□□□□ -0.63
NPIPB4-202ENST00000341400 POTEBQ6S5H4 581 aa11.14□□□□□ -0.63
NPIPB4-202ENST00000341400 GPKOWQ92917 476 aaPredicted RBP eCLIP11.14□□□□□ -0.63
NPIPB4-202ENST00000341400 MCCD1P59942 119 aaPredicted RBP11.13□□□□□ -0.63
NPIPB4-202ENST00000341400 LHX8Q68G74 356 aa11.13□□□□□ -0.63
NPIPB4-202ENST00000341400 PDXDC2PQ6P474 469 aa11.13□□□□□ -0.63
NPIPB4-202ENST00000341400 WNT2BQ93097 391 aa11.13□□□□□ -0.63
NPIPB4-202ENST00000341400 EVA1BQ9NVM1 165 aa11.13□□□□□ -0.63
NPIPB4-202ENST00000341400 DXOO77932 396 aaKnown RBP11.12□□□□□ -0.63
NPIPB4-202ENST00000341400 SLFNL1Q499Z3 407 aa11.12□□□□□ -0.63
NPIPB4-202ENST00000341400 FAM174AQ8TBP5 190 aa11.12□□□□□ -0.63
NPIPB4-202ENST00000341400 NUDT12Q9BQG2 462 aa11.12□□□□□ -0.63
NPIPB4-202ENST00000341400 ZMIZ1Q9ULJ6 1067 aa11.12□□□□□ -0.63
NPIPB4-202ENST00000341400 NOVA2Q9UNW9 492 aaKnown RBP11.12□□□□□ -0.63
NPIPB4-202ENST00000341400 KCNH2Q12809 1159 aa11.11□□□□□ -0.63
NPIPB4-202ENST00000341400 NBPF14Q5TI25 921 aa11.11□□□□□ -0.63
NPIPB4-202ENST00000341400 TMEM164Q5U3C3 297 aa11.11□□□□□ -0.63
NPIPB4-202ENST00000341400 SPSB2Q99619 263 aa11.11□□□□□ -0.63
NPIPB4-202ENST00000341400 CEP126Q9P2H0 1117 aa11.11□□□□□ -0.63
NPIPB4-202ENST00000341400 FOXD4L5Q5VV16 416 aaPredicted RBP11.1□□□□□ -0.63
NPIPB4-202ENST00000341400 DEPDC4Q8N2C3 294 aa11.1□□□□□ -0.63
NPIPB4-202ENST00000341400 FAM160A2Q8N612 972 aaPredicted RBP11.1□□□□□ -0.63
NPIPB4-202ENST00000341400 FOXD4L4Q8WXT5 416 aaPredicted RBP11.1□□□□□ -0.63
NPIPB4-202ENST00000341400 FAM196BA6NMK8 535 aa11.09□□□□□ -0.63
NPIPB4-202ENST00000341400 MMP16P51512 607 aa11.09□□□□□ -0.63
NPIPB4-202ENST00000341400 ANKRD13DQ6ZTN6 518 aa11.09□□□□□ -0.63
NPIPB4-202ENST00000341400 SND1Q7KZF4 910 aaKnown RBP eCLIP11.09□□□□□ -0.63
NPIPB4-202ENST00000341400 STK32AQ8WU08 396 aa11.09□□□□□ -0.63
NPIPB4-202ENST00000341400 MKRN1Q9UHC7 482 aaKnown RBP11.09□□□□□ -0.63
NPIPB4-202ENST00000341400 PCDHB9Q9Y5E1 797 aa11.09□□□□□ -0.63
NPIPB4-202ENST00000341400 CCDC27Q2M243 656 aa11.08□□□□□ -0.64
NPIPB4-202ENST00000341400 LARP1Q6PKG0 1096 aaKnown RBP11.08□□□□□ -0.64
NPIPB4-202ENST00000341400 RNF135Q8IUD6 432 aa11.08□□□□□ -0.64
NPIPB4-202ENST00000341400 FAM163AQ96GL9 167 aaPredicted RBP11.08□□□□□ -0.64
NPIPB4-202ENST00000341400 GNEQ9Y223 722 aaKnown RBP11.08□□□□□ -0.64
NPIPB4-202ENST00000341400 USP17L15C9J2P7 530 aa11.07□□□□□ -0.64
NPIPB4-202ENST00000341400 USP17L10C9JJH3 530 aa11.07□□□□□ -0.64
NPIPB4-202ENST00000341400 USP17L13C9JLJ4 530 aa11.07□□□□□ -0.64
NPIPB4-202ENST00000341400 USP17L12C9JPN9 530 aa11.07□□□□□ -0.64
NPIPB4-202ENST00000341400 USP17L11C9JVI0 530 aa11.07□□□□□ -0.64
NPIPB4-202ENST00000341400 USP17L21D6R901 530 aa11.07□□□□□ -0.64
NPIPB4-202ENST00000341400 USP17L18D6R9N7 530 aa11.07□□□□□ -0.64
NPIPB4-202ENST00000341400 USP17L22D6RA61 530 aa11.07□□□□□ -0.64
NPIPB4-202ENST00000341400 USP17L17D6RBQ6 530 aa11.07□□□□□ -0.64
NPIPB4-202ENST00000341400 USP17L19D6RCP7 530 aa11.07□□□□□ -0.64
NPIPB4-202ENST00000341400 USP17L20D6RJB6 530 aa11.07□□□□□ -0.64
NPIPB4-202ENST00000341400 LZTS3O60299 673 aaPredicted RBP11.07□□□□□ -0.64
NPIPB4-202ENST00000341400 USP17L24Q0WX57 530 aa11.07□□□□□ -0.64
NPIPB4-202ENST00000341400 WBP1LQ9NX94 342 aa11.07□□□□□ -0.64
NPIPB4-202ENST00000341400 ATP5J2-PTCD1G3V325 749 aa11.06□□□□□ -0.64
NPIPB4-202ENST00000341400 NCOA4Q13772 614 aa11.06□□□□□ -0.64
NPIPB4-202ENST00000341400 OCSTAMPQ9BR26 566 aa11.06□□□□□ -0.64
NPIPB4-202ENST00000341400 RASA1P20936 1047 aa11.05□□□□□ -0.64
NPIPB4-202ENST00000341400 COPS2P61201 443 aa11.05□□□□□ -0.64
NPIPB4-202ENST00000341400 CRTC2Q53ET0 693 aaPredicted RBP11.05□□□□□ -0.64
NPIPB4-202ENST00000341400 PHTF2Q8N3S3 785 aa11.05□□□□□ -0.64
NPIPB4-202ENST00000341400 PLPP7Q8NBV4 271 aa11.05□□□□□ -0.64
NPIPB4-202ENST00000341400 ARHGAP9Q9BRR9 750 aa11.05□□□□□ -0.64
NPIPB4-202ENST00000341400 PRDM9Q9NQV7 894 aa11.05□□□□□ -0.64
NPIPB4-202ENST00000341400 ADAM32Q8TC27 787 aa11.04□□□□□ -0.64
NPIPB4-202ENST00000341400 CCER1Q8TC90 406 aaPredicted RBP11.04□□□□□ -0.64
NPIPB4-202ENST00000341400 PTK7Q13308 1070 aa11.03□□□□□ -0.64
NPIPB4-202ENST00000341400 MAP7D1Q3KQU3 841 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms