RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 KRT27Q7Z3Y8 459 aa18.93■□□□□ 0.62
NECTIN1-203ENST00000341398 BTG4Q9NY30 223 aa18.93■□□□□ 0.62
NECTIN1-203ENST00000341398 BLMP54132 1417 aaPredicted RBP18.93■□□□□ 0.62
NECTIN1-203ENST00000341398 ALS2Q96Q42 1657 aa18.93■□□□□ 0.62
NECTIN1-203ENST00000341398 ARHGEF28Q8N1W1 1705 aaKnown RBP18.93■□□□□ 0.62
NECTIN1-203ENST00000341398 CDK19Q9BWU1 502 aa18.92■□□□□ 0.62
NECTIN1-203ENST00000341398 COL14A1Q05707 1796 aaKnown RBP18.91■□□□□ 0.62
NECTIN1-203ENST00000341398 KIAA1210Q9ULL0 1709 aa18.9■□□□□ 0.62
NECTIN1-203ENST00000341398 CCDC61Q9Y6R9 512 aa18.9■□□□□ 0.62
NECTIN1-203ENST00000341398 PRDM11Q9NQV5 511 aa18.89■□□□□ 0.61
NECTIN1-203ENST00000341398 FAM98CQ17RN3 349 aaKnown RBP18.88■□□□□ 0.61
NECTIN1-203ENST00000341398 ATP7BP35670 1465 aa18.86■□□□□ 0.61
NECTIN1-203ENST00000341398 NRAPQ86VF7 1730 aa18.85■□□□□ 0.61
NECTIN1-203ENST00000341398 NBPF8Q3BBV2 869 aa18.85■□□□□ 0.61
NECTIN1-203ENST00000341398 ACEP12821 1306 aa18.85■□□□□ 0.61
NECTIN1-203ENST00000341398 PLEKHG3A1L390 1219 aa18.84■□□□□ 0.61
NECTIN1-203ENST00000341398 DEFB132Q7Z7B7 95 aa18.84■□□□□ 0.61
NECTIN1-203ENST00000341398 SPATA31A5Q5VU36 1347 aa18.84■□□□□ 0.61
NECTIN1-203ENST00000341398 SPATA31A7Q8IWB4 1347 aa18.84■□□□□ 0.61
NECTIN1-203ENST00000341398 BAG6P46379 1132 aa18.83■□□□□ 0.61
NECTIN1-203ENST00000341398 NBPF1Q3BBV0 1214 aa18.83■□□□□ 0.61
NECTIN1-203ENST00000341398 SRPK2P78362 688 aaKnown RBP18.82■□□□□ 0.6
NECTIN1-203ENST00000341398 ABTB2Q8N961 1025 aa18.82■□□□□ 0.6
NECTIN1-203ENST00000341398 POLR3AO14802 1390 aaPredicted RBP18.82■□□□□ 0.6
NECTIN1-203ENST00000341398 CRYBG1Q9Y4K1 1723 aa18.82■□□□□ 0.6
NECTIN1-203ENST00000341398 EVA1CP58658 441 aa18.81■□□□□ 0.6
NECTIN1-203ENST00000341398 CENPJQ9HC77 1338 aaPredicted RBP18.81■□□□□ 0.6
NECTIN1-203ENST00000341398 ZC3H6P61129 1189 aaKnown RBP18.81■□□□□ 0.6
NECTIN1-203ENST00000341398 NUTM2GQ5VZR2 741 aa18.81■□□□□ 0.6
NECTIN1-203ENST00000341398 KIAA0232Q92628 1395 aa18.8■□□□□ 0.6
NECTIN1-203ENST00000341398 STRN4Q9NRL3 753 aa18.8■□□□□ 0.6
NECTIN1-203ENST00000341398 CHRNA2Q15822 529 aa18.79■□□□□ 0.6
NECTIN1-203ENST00000341398 NLRP13Q86W25 1043 aa18.79■□□□□ 0.6
NECTIN1-203ENST00000341398 TOPAZ1Q8N9V7 1692 aa18.78■□□□□ 0.6
NECTIN1-203ENST00000341398 SPATA31A1Q5TZJ5 1347 aa18.77■□□□□ 0.6
NECTIN1-203ENST00000341398 PHRF1Q9P1Y6 1649 aaKnown RBP18.77■□□□□ 0.6
NECTIN1-203ENST00000341398 BRD4O60885 1362 aaPredicted RBP18.76■□□□□ 0.59
NECTIN1-203ENST00000341398 CABP2Q9NPB3 220 aa18.76■□□□□ 0.59
NECTIN1-203ENST00000341398 PPIP5K1Q6PFW1 1433 aa18.75■□□□□ 0.59
NECTIN1-203ENST00000341398 L3MBTL2Q969R5 705 aa18.75■□□□□ 0.59
NECTIN1-203ENST00000341398 RGPD1P0DJD0 1748 aa18.75■□□□□ 0.59
NECTIN1-203ENST00000341398 FAM196AQ6ZSG2 479 aa18.74■□□□□ 0.59
NECTIN1-203ENST00000341398 USP35Q9P2H5 1018 aa18.74■□□□□ 0.59
NECTIN1-203ENST00000341398 FAM182BQ5T319 152 aa18.73■□□□□ 0.59
NECTIN1-203ENST00000341398 THSD7AQ9UPZ6 1657 aa18.73■□□□□ 0.59
NECTIN1-203ENST00000341398 GCP02774 474 aa18.72■□□□□ 0.59
NECTIN1-203ENST00000341398 PDE3BQ13370 1112 aa18.72■□□□□ 0.59
NECTIN1-203ENST00000341398 BARGINQ6ZT62 677 aa18.72■□□□□ 0.59
NECTIN1-203ENST00000341398 CABP1Q9NZU7 370 aa18.72■□□□□ 0.59
NECTIN1-203ENST00000341398 EVC2Q86UK5 1308 aa18.72■□□□□ 0.59
NECTIN1-203ENST00000341398 QRICH2Q9H0J4 1663 aa18.72■□□□□ 0.59
NECTIN1-203ENST00000341398 CPDO75976 1380 aa18.72■□□□□ 0.59
NECTIN1-203ENST00000341398 EN1Q05925 392 aaPredicted RBP18.71■□□□□ 0.59
NECTIN1-203ENST00000341398 NEUROD1Q13562 356 aa18.7■□□□□ 0.58
NECTIN1-203ENST00000341398 USP19O94966 1318 aa18.7■□□□□ 0.58
NECTIN1-203ENST00000341398 NLRP6P59044 892 aa18.69■□□□□ 0.58
NECTIN1-203ENST00000341398 TCP11L2Q8N4U5 519 aa18.69■□□□□ 0.58
NECTIN1-203ENST00000341398 THRAP3Q9Y2W1 955 aaKnown RBP18.69■□□□□ 0.58
NECTIN1-203ENST00000341398 SSH2Q76I76 1423 aa18.69■□□□□ 0.58
NECTIN1-203ENST00000341398 SIN3AQ96ST3 1273 aa18.68■□□□□ 0.58
NECTIN1-203ENST00000341398 NRKQ7Z2Y5 1582 aa18.68■□□□□ 0.58
NECTIN1-203ENST00000341398 TRIM37O94972 964 aa18.68■□□□□ 0.58
NECTIN1-203ENST00000341398 LARP1Q6PKG0 1096 aaKnown RBP18.68■□□□□ 0.58
NECTIN1-203ENST00000341398 ZNF692Q9BU19 519 aaPredicted RBP18.68■□□□□ 0.58
NECTIN1-203ENST00000341398 CAMTA1Q9Y6Y1 1673 aa18.67■□□□□ 0.58
NECTIN1-203ENST00000341398 LRP5O75197 1615 aa18.67■□□□□ 0.58
NECTIN1-203ENST00000341398 ROCK2O75116 1388 aaKnown RBP18.67■□□□□ 0.58
NECTIN1-203ENST00000341398 C11orf95C9JLR9 678 aaPredicted RBP18.67■□□□□ 0.58
NECTIN1-203ENST00000341398 USP6P35125 1406 aa18.66■□□□□ 0.58
NECTIN1-203ENST00000341398 ZBTB7CA1YPR0 619 aa18.66■□□□□ 0.58
NECTIN1-203ENST00000341398 PSDA5PKW4 1024 aaPredicted RBP18.66■□□□□ 0.58
NECTIN1-203ENST00000341398 DISP2A7MBM2 1401 aa18.65■□□□□ 0.58
NECTIN1-203ENST00000341398 APBA3O96018 575 aa18.65■□□□□ 0.58
NECTIN1-203ENST00000341398 TRPM1Q7Z4N2 1603 aa18.65■□□□□ 0.58
NECTIN1-203ENST00000341398 LMO7Q8WWI1 1683 aa18.63■□□□□ 0.57
NECTIN1-203ENST00000341398 EZH2Q15910 746 aaKnown RBP18.63■□□□□ 0.57
NECTIN1-203ENST00000341398 TNS1Q9HBL0 1735 aaKnown RBP18.63■□□□□ 0.57
NECTIN1-203ENST00000341398 PARD3Q8TEW0 1356 aa18.62■□□□□ 0.57
NECTIN1-203ENST00000341398 KCNH5Q8NCM2 988 aa18.62■□□□□ 0.57
NECTIN1-203ENST00000341398 AATKQ6ZMQ8 1374 aa18.62■□□□□ 0.57
NECTIN1-203ENST00000341398 R3HDM1Q15032 1099 aaKnown RBP18.61■□□□□ 0.57
NECTIN1-203ENST00000341398 CAMKK2Q96RR4 588 aa18.61■□□□□ 0.57
NECTIN1-203ENST00000341398 CRB1P82279 1406 aa18.61■□□□□ 0.57
NECTIN1-203ENST00000341398 COL5A2P05997 1499 aaPredicted RBP18.6■□□□□ 0.57
NECTIN1-203ENST00000341398 NBPF14Q5TI25 921 aa18.59■□□□□ 0.57
NECTIN1-203ENST00000341398 TOM1L2Q6ZVM7 507 aa18.59■□□□□ 0.57
NECTIN1-203ENST00000341398 TTC21BQ7Z4L5 1316 aa18.59■□□□□ 0.57
NECTIN1-203ENST00000341398 TTC21AQ8NDW8 1320 aa18.59■□□□□ 0.57
NECTIN1-203ENST00000341398 SLIT3O75094 1523 aa18.58■□□□□ 0.56
NECTIN1-203ENST00000341398 PARP4Q9UKK3 1724 aaKnown RBP18.57■□□□□ 0.56
NECTIN1-203ENST00000341398 DDB1Q16531 1140 aa18.56■□□□□ 0.56
NECTIN1-203ENST00000341398 CDCA7Q9BWT1 371 aaPredicted RBP18.56■□□□□ 0.56
NECTIN1-203ENST00000341398 AKAP12Q02952 1782 aa18.56■□□□□ 0.56
NECTIN1-203ENST00000341398 KTN1Q86UP2 1357 aaKnown RBP18.56■□□□□ 0.56
NECTIN1-203ENST00000341398 PIK3C2AO00443 1686 aa18.55■□□□□ 0.56
NECTIN1-203ENST00000341398 ARHGEF25Q86VW2 580 aa18.55■□□□□ 0.56
NECTIN1-203ENST00000341398 CARD11Q9BXL7 1154 aa18.55■□□□□ 0.56
NECTIN1-203ENST00000341398 WDR17Q8IZU2 1322 aa18.54■□□□□ 0.56
NECTIN1-203ENST00000341398 CSB-PGBD3P0DP91 1061 aa18.54■□□□□ 0.56
NECTIN1-203ENST00000341398 SOX12O15370 315 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms