RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 RIMS2Q9UQ26 1411 aa19.53■□□□□ 0.72
PERM1-201ENST00000341290 RUNDC1Q96C34 613 aa19.53■□□□□ 0.72
PERM1-201ENST00000341290 ADGRB1O14514 1584 aa19.52■□□□□ 0.71
PERM1-201ENST00000341290 POGKQ9P215 609 aa19.51■□□□□ 0.71
PERM1-201ENST00000341290 STRCQ7RTU9 1775 aa19.51■□□□□ 0.71
PERM1-201ENST00000341290 PDZRN3Q9UPQ7 1066 aa19.51■□□□□ 0.71
PERM1-201ENST00000341290 U2AF1L5P0DN76 240 aaPredicted RBP19.5■□□□□ 0.71
PERM1-201ENST00000341290 U2AF1Q01081 240 aaKnown RBP eCLIP19.5■□□□□ 0.71
PERM1-201ENST00000341290 SLC24A1O60721 1099 aa19.5■□□□□ 0.71
PERM1-201ENST00000341290 PLEKHG1Q9ULL1 1385 aa19.49■□□□□ 0.71
PERM1-201ENST00000341290 TSR2Q969E8 191 aaKnown RBP19.49■□□□□ 0.71
PERM1-201ENST00000341290 MAPK8IP3Q9UPT6 1336 aa19.49■□□□□ 0.71
PERM1-201ENST00000341290 ALKQ9UM73 1620 aa19.49■□□□□ 0.71
PERM1-201ENST00000341290 POLR3AO14802 1390 aaPredicted RBP19.49■□□□□ 0.71
PERM1-201ENST00000341290 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.47■□□□□ 0.71
PERM1-201ENST00000341290 SBNO2Q9Y2G9 1366 aa19.47■□□□□ 0.71
PERM1-201ENST00000341290 BECN1Q14457 450 aa19.46■□□□□ 0.71
PERM1-201ENST00000341290 PMFBP1Q8TBY8 1022 aa19.45■□□□□ 0.7
PERM1-201ENST00000341290 RSPH6AQ9H0K4 717 aa19.45■□□□□ 0.7
PERM1-201ENST00000341290 CABP2Q9NPB3 220 aa19.45■□□□□ 0.7
PERM1-201ENST00000341290 XRN1Q8IZH2 1706 aaKnown RBP19.45■□□□□ 0.7
PERM1-201ENST00000341290 NWD1Q149M9 1564 aa19.45■□□□□ 0.7
PERM1-201ENST00000341290 THEMISQ8N1K5 641 aaPredicted RBP19.45■□□□□ 0.7
PERM1-201ENST00000341290 CHD2O14647 1828 aaKnown RBP19.44■□□□□ 0.7
PERM1-201ENST00000341290 U2SURPO15042 1029 aaKnown RBP19.44■□□□□ 0.7
PERM1-201ENST00000341290 DLC1Q96QB1 1528 aa19.44■□□□□ 0.7
PERM1-201ENST00000341290 ARHGEF28Q8N1W1 1705 aaKnown RBP19.44■□□□□ 0.7
PERM1-201ENST00000341290 FTSJ3Q8IY81 847 aaKnown RBP19.43■□□□□ 0.7
PERM1-201ENST00000341290 NGEFQ8N5V2 710 aa19.43■□□□□ 0.7
PERM1-201ENST00000341290 CFAP53Q96M91 514 aa19.43■□□□□ 0.7
PERM1-201ENST00000341290 UPF2Q9HAU5 1272 aaKnown RBP19.43■□□□□ 0.7
PERM1-201ENST00000341290 VGFO15240 615 aaPredicted RBP19.43■□□□□ 0.7
PERM1-201ENST00000341290 ADAMTS13Q76LX8 1427 aa19.43■□□□□ 0.7
PERM1-201ENST00000341290 STK26Q9P289 416 aa19.42■□□□□ 0.7
PERM1-201ENST00000341290 HDGFP51858 240 aaKnown RBP19.41■□□□□ 0.7
PERM1-201ENST00000341290 CPS1P31327 1500 aa19.41■□□□□ 0.7
PERM1-201ENST00000341290 VSIG10Q8N0Z9 540 aa19.41■□□□□ 0.7
PERM1-201ENST00000341290 TBC1D2Q9BYX2 928 aa19.41■□□□□ 0.7
PERM1-201ENST00000341290 WDR63Q8IWG1 891 aa19.41■□□□□ 0.7
PERM1-201ENST00000341290 RWDD1Q9H446 243 aaPredicted RBP19.41■□□□□ 0.7
PERM1-201ENST00000341290 MFAP1P55081 439 aaKnown RBP19.4■□□□□ 0.7
PERM1-201ENST00000341290 C14orf93Q9H972 538 aaKnown RBP19.4■□□□□ 0.7
PERM1-201ENST00000341290 SMC4Q9NTJ3 1288 aa19.39■□□□□ 0.69
PERM1-201ENST00000341290 TECPR2O15040 1411 aa19.39■□□□□ 0.69
PERM1-201ENST00000341290 NINLQ9Y2I6 1382 aa19.39■□□□□ 0.69
PERM1-201ENST00000341290 GGNBP2Q9H3C7 697 aa19.39■□□□□ 0.69
PERM1-201ENST00000341290 EXOSC9Q06265 439 aaKnown RBP19.38■□□□□ 0.69
PERM1-201ENST00000341290 TBC1D32Q96NH3 1257 aa19.38■□□□□ 0.69
PERM1-201ENST00000341290 PIK3R4Q99570 1358 aa19.38■□□□□ 0.69
PERM1-201ENST00000341290 MVPQ14764 893 aaKnown RBP19.38■□□□□ 0.69
PERM1-201ENST00000341290 ITPRIPQ8IWB1 547 aa19.38■□□□□ 0.69
PERM1-201ENST00000341290 PHF23Q9BUL5 403 aaPredicted RBP19.38■□□□□ 0.69
PERM1-201ENST00000341290 GZF1Q9H116 711 aaPredicted RBP19.38■□□□□ 0.69
PERM1-201ENST00000341290 MYH16Q9H6N6 1097 aa19.38■□□□□ 0.69
PERM1-201ENST00000341290 SHPRHQ149N8 1683 aa19.37■□□□□ 0.69
PERM1-201ENST00000341290 ZKSCAN2Q63HK3 967 aa19.37■□□□□ 0.69
PERM1-201ENST00000341290 DZIP1LQ8IYY4 767 aaKnown RBP19.37■□□□□ 0.69
PERM1-201ENST00000341290 QRICH2Q9H0J4 1663 aa19.36■□□□□ 0.69
PERM1-201ENST00000341290 ZMYND15Q9H091 742 aa19.35■□□□□ 0.69
PERM1-201ENST00000341290 ANTXR1Q9H6X2 564 aa19.35■□□□□ 0.69
PERM1-201ENST00000341290 IQSEC2Q5JU85 1478 aa19.34■□□□□ 0.69
PERM1-201ENST00000341290 SRPK2P78362 688 aaKnown RBP19.34■□□□□ 0.69
PERM1-201ENST00000341290 NPHP4O75161 1426 aaPredicted RBP19.34■□□□□ 0.69
PERM1-201ENST00000341290 TRIM27P14373 513 aa19.34■□□□□ 0.69
PERM1-201ENST00000341290 LTKP29376 864 aa19.33■□□□□ 0.69
PERM1-201ENST00000341290 SSH1Q8WYL5 1049 aa19.33■□□□□ 0.69
PERM1-201ENST00000341290 GLIPR1L2Q4G1C9 344 aa19.33■□□□□ 0.68
PERM1-201ENST00000341290 FAM43AQ8N2R8 423 aa19.32■□□□□ 0.68
PERM1-201ENST00000341290 EVC2Q86UK5 1308 aa19.32■□□□□ 0.68
PERM1-201ENST00000341290 NOB1Q9ULX3 412 aaKnown RBP19.32■□□□□ 0.68
PERM1-201ENST00000341290 ADGRB2O60241 1585 aa19.32■□□□□ 0.68
PERM1-201ENST00000341290 STAG3Q9UJ98 1225 aa19.31■□□□□ 0.68
PERM1-201ENST00000341290 VIRMAQ69YN4 1812 aaKnown RBP19.31■□□□□ 0.68
PERM1-201ENST00000341290 USP32Q8NFA0 1604 aa19.31■□□□□ 0.68
PERM1-201ENST00000341290 FBLN1P23142 703 aa19.31■□□□□ 0.68
PERM1-201ENST00000341290 C22orf23Q9BZE7 217 aa19.3■□□□□ 0.68
PERM1-201ENST00000341290 CCDC27Q2M243 656 aa19.3■□□□□ 0.68
PERM1-201ENST00000341290 EID1Q9Y6B2 187 aa19.3■□□□□ 0.68
PERM1-201ENST00000341290 STRCP1A6NGW2 1772 aa19.29■□□□□ 0.68
PERM1-201ENST00000341290 TMPOP42166 694 aaKnown RBP19.29■□□□□ 0.68
PERM1-201ENST00000341290 SIRT1Q96EB6 747 aa19.29■□□□□ 0.68
PERM1-201ENST00000341290 TBX22Q9Y458 520 aa19.29■□□□□ 0.68
PERM1-201ENST00000341290 PTCH1Q13635 1447 aa19.29■□□□□ 0.68
PERM1-201ENST00000341290 ANKLE2Q86XL3 938 aa19.29■□□□□ 0.68
PERM1-201ENST00000341290 TRIM35Q9UPQ4 493 aa19.29■□□□□ 0.68
PERM1-201ENST00000341290 TMEM57Q8N5G2 664 aa19.28■□□□□ 0.68
PERM1-201ENST00000341290 MINK1Q8N4C8 1332 aaPredicted RBP19.28■□□□□ 0.68
PERM1-201ENST00000341290 FAM135BQ49AJ0 1406 aa19.28■□□□□ 0.68
PERM1-201ENST00000341290 RIPK4P57078 832 aa19.27■□□□□ 0.68
PERM1-201ENST00000341290 ABCC11Q96J66 1382 aa19.27■□□□□ 0.68
PERM1-201ENST00000341290 YTHDC2Q9H6S0 1430 aaKnown RBP19.27■□□□□ 0.67
PERM1-201ENST00000341290 TXNDC2Q86VQ3 553 aa19.27■□□□□ 0.67
PERM1-201ENST00000341290 ATF7IPQ6VMQ6 1270 aa19.26■□□□□ 0.67
PERM1-201ENST00000341290 LNPKQ9C0E8 428 aa19.25■□□□□ 0.67
PERM1-201ENST00000341290 ANKRD36BQ8N2N9 1353 aa19.25■□□□□ 0.67
PERM1-201ENST00000341290 AAMPQ13685 434 aa19.25■□□□□ 0.67
PERM1-201ENST00000341290 PLEKHF1Q96S99 279 aa19.25■□□□□ 0.67
PERM1-201ENST00000341290 A0A1W2PP64 1363 aa19.24■□□□□ 0.67
PERM1-201ENST00000341290 PTPRUQ92729 1446 aa19.24■□□□□ 0.67
PERM1-201ENST00000341290 PUS7Q96PZ0 661 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms