RNA–Protein interactions for RNA: ENST00000340951.8

EXD3-201, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXD3, Length 2,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-201ENST00000340951 EFCAB6Q5THR3 1501 aa21.42■■□□□ 1.02
EXD3-201ENST00000340951 GOLGA6L22H0YM25 854 aa21.42■■□□□ 1.02
EXD3-201ENST00000340951 PRDM4Q9UKN5 801 aa21.42■■□□□ 1.02
EXD3-201ENST00000340951 PPRC1Q5VV67 1664 aaKnown RBP21.41■■□□□ 1.02
EXD3-201ENST00000340951 DDX49Q9Y6V7 483 aaKnown RBP21.41■■□□□ 1.02
EXD3-201ENST00000340951 ABCA6Q8N139 1617 aa21.41■■□□□ 1.02
EXD3-201ENST00000340951 HDAC1Q13547 482 aaPredicted RBP21.4■■□□□ 1.02
EXD3-201ENST00000340951 SSFA2P28290 1259 aa21.4■■□□□ 1.02
EXD3-201ENST00000340951 ITPRIPQ8IWB1 547 aa21.4■■□□□ 1.02
EXD3-201ENST00000340951 MAP3K4Q9Y6R4 1608 aa21.39■■□□□ 1.02
EXD3-201ENST00000340951 TERF1P54274 439 aa21.39■■□□□ 1.01
EXD3-201ENST00000340951 MAP7D2Q96T17 732 aa21.39■■□□□ 1.01
EXD3-201ENST00000340951 STK26Q9P289 416 aa21.39■■□□□ 1.01
EXD3-201ENST00000340951 POGZQ7Z3K3 1410 aa21.39■■□□□ 1.01
EXD3-201ENST00000340951 CD2BP2O95400 341 aaKnown RBP21.38■■□□□ 1.01
EXD3-201ENST00000340951 MORC1Q86VD1 984 aa21.38■■□□□ 1.01
EXD3-201ENST00000340951 PHF23Q9BUL5 403 aaPredicted RBP21.38■■□□□ 1.01
EXD3-201ENST00000340951 C14orf93Q9H972 538 aaKnown RBP21.38■■□□□ 1.01
EXD3-201ENST00000340951 ARID3AQ99856 593 aa21.37■■□□□ 1.01
EXD3-201ENST00000340951 SMC4Q9NTJ3 1288 aa21.37■■□□□ 1.01
EXD3-201ENST00000340951 KDM5AP29375 1690 aaKnown RBP21.37■■□□□ 1.01
EXD3-201ENST00000340951 MYOM2P54296 1465 aa21.36■■□□□ 1.01
EXD3-201ENST00000340951 MROH2AA6NES4 1674 aa21.36■■□□□ 1.01
EXD3-201ENST00000340951 KLHL40Q2TBA0 621 aa21.36■■□□□ 1.01
EXD3-201ENST00000340951 LNPKQ9C0E8 428 aa21.35■■□□□ 1.01
EXD3-201ENST00000340951 K7ELQ4 463 aaPredicted RBP21.35■■□□□ 1.01
EXD3-201ENST00000340951 TRIM27P14373 513 aa21.34■■□□□ 1.01
EXD3-201ENST00000340951 CYB5RLQ6IPT4 315 aa21.34■■□□□ 1.01
EXD3-201ENST00000340951 DDX19BQ9UMR2 479 aa21.34■■□□□ 1.01
EXD3-201ENST00000340951 UQCRHLA0A096LP55 91 aa21.34■■□□□ 1.01
EXD3-201ENST00000340951 UQCRHP07919 91 aa21.34■■□□□ 1.01
EXD3-201ENST00000340951 NCLP19338 710 aaKnown RBP21.34■■□□□ 1.01
EXD3-201ENST00000340951 XPCQ01831 940 aaPredicted RBP21.34■■□□□ 1.01
EXD3-201ENST00000340951 NSD3Q9BZ95 1437 aa21.34■■□□□ 1.01
EXD3-201ENST00000340951 IQSEC2Q5JU85 1478 aa21.34■■□□□ 1.01
EXD3-201ENST00000340951 KIF2CQ99661 725 aa21.33■■□□□ 1.01
EXD3-201ENST00000340951 CABP2Q9NPB3 220 aa21.33■■□□□ 1.01
EXD3-201ENST00000340951 IDI1Q13907 227 aa21.33■■□□□ 1
EXD3-201ENST00000340951 TSR2Q969E8 191 aaKnown RBP21.33■■□□□ 1
EXD3-201ENST00000340951 BAG4O95429 457 aaKnown RBP21.32■■□□□ 1
EXD3-201ENST00000340951 IBTKQ9P2D0 1353 aaPredicted RBP21.32■■□□□ 1
EXD3-201ENST00000340951 KIF1BO60333 1816 aa21.32■■□□□ 1
EXD3-201ENST00000340951 GAS2L2Q8NHY3 880 aa21.32■■□□□ 1
EXD3-201ENST00000340951 RBM42Q9BTD8 480 aaKnown RBP21.32■■□□□ 1
EXD3-201ENST00000340951 FRMPD1Q5SYB0 1578 aa21.32■■□□□ 1
EXD3-201ENST00000340951 SLC24A1O60721 1099 aa21.31■■□□□ 1
EXD3-201ENST00000340951 CCDC27Q2M243 656 aa21.3■■□□□ 1
EXD3-201ENST00000340951 CAVIN1Q6NZI2 390 aaKnown RBP21.3■■□□□ 1
EXD3-201ENST00000340951 NOL7Q9UMY1 257 aaKnown RBP21.3■■□□□ 1
EXD3-201ENST00000340951 NUCB1Q02818 461 aa21.3■■□□□ 1
EXD3-201ENST00000340951 HS1BP3Q53T59 392 aa21.3■■□□□ 1
EXD3-201ENST00000340951 ZNF500O60304 480 aaPredicted RBP21.29■■□□□ 1
EXD3-201ENST00000340951 SHPRHQ149N8 1683 aa21.28■■□□□ 1
EXD3-201ENST00000340951 MLH3Q9UHC1 1453 aa21.28■■□□□ 1
EXD3-201ENST00000340951 PLEKHG5O94827 1062 aa21.28■■□□□ 1
EXD3-201ENST00000340951 MCTP1Q6DN14 999 aa21.28■■□□□ 1
EXD3-201ENST00000340951 ATF7IPQ6VMQ6 1270 aa21.28■■□□□ 1
EXD3-201ENST00000340951 MTHFSP49914 203 aa21.28■■□□□ 1
EXD3-201ENST00000340951 ZNF445P59923 1031 aa21.28■■□□□ 1
EXD3-201ENST00000340951 EXOSC9Q06265 439 aaKnown RBP21.28■■□□□ 1
EXD3-201ENST00000340951 ADGRB3O60242 1522 aa21.28■■□□□ 1
EXD3-201ENST00000340951 TMEM57Q8N5G2 664 aa21.27■■□□□ 1
EXD3-201ENST00000340951 SSH1Q8WYL5 1049 aa21.27■■□□□ 1
EXD3-201ENST00000340951 ZSCAN23Q3MJ62 389 aa21.27■■□□□ 1
EXD3-201ENST00000340951 RBSNQ9H1K0 784 aa21.27■■□□□ 1
EXD3-201ENST00000340951 VGFO15240 615 aaPredicted RBP21.26■□□□□ 0.99
EXD3-201ENST00000340951 CHD1LQ86WJ1 897 aa21.26■□□□□ 0.99
EXD3-201ENST00000340951 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.26■□□□□ 0.99
EXD3-201ENST00000340951 FBXO31Q5XUX0 539 aaPredicted RBP21.26■□□□□ 0.99
EXD3-201ENST00000340951 CLEC17AQ6ZS10 378 aa21.26■□□□□ 0.99
EXD3-201ENST00000340951 NRXN1Q9ULB1 1477 aa21.26■□□□□ 0.99
EXD3-201ENST00000340951 NOB1Q9ULX3 412 aaKnown RBP21.26■□□□□ 0.99
EXD3-201ENST00000340951 LMTK2Q8IWU2 1503 aa21.26■□□□□ 0.99
EXD3-201ENST00000340951 BMP2KLQ5H9B9 411 aa21.26■□□□□ 0.99
EXD3-201ENST00000340951 CFAP53Q96M91 514 aa21.25■□□□□ 0.99
EXD3-201ENST00000340951 ZBTB40Q9NUA8 1239 aa21.25■□□□□ 0.99
EXD3-201ENST00000340951 YEATS2Q9ULM3 1422 aa21.25■□□□□ 0.99
EXD3-201ENST00000340951 U2AF1L5P0DN76 240 aaPredicted RBP21.25■□□□□ 0.99
EXD3-201ENST00000340951 SRPK2P78362 688 aaKnown RBP21.25■□□□□ 0.99
EXD3-201ENST00000340951 U2AF1Q01081 240 aaKnown RBP eCLIP21.25■□□□□ 0.99
EXD3-201ENST00000340951 SMAP1Q8IYB5 467 aaPredicted RBP21.24■□□□□ 0.99
EXD3-201ENST00000340951 ABCC3O15438 1527 aa21.24■□□□□ 0.99
EXD3-201ENST00000340951 KIAA1210Q9ULL0 1709 aa21.24■□□□□ 0.99
EXD3-201ENST00000340951 CT47B1P0C2W7 299 aaPredicted RBP21.24■□□□□ 0.99
EXD3-201ENST00000340951 MTERF4Q7Z6M4 381 aaKnown RBP21.24■□□□□ 0.99
EXD3-201ENST00000340951 HECW2Q9P2P5 1572 aa21.24■□□□□ 0.99
EXD3-201ENST00000340951 DYNC1I1O14576 645 aa21.23■□□□□ 0.99
EXD3-201ENST00000340951 PRDM10Q9NQV6 1147 aa21.23■□□□□ 0.99
EXD3-201ENST00000340951 PDLIM2Q96JY6 352 aa21.23■□□□□ 0.99
EXD3-201ENST00000340951 ZKSCAN5Q9Y2L8 839 aa21.23■□□□□ 0.99
EXD3-201ENST00000340951 CSPP1Q1MSJ5 1256 aa21.22■□□□□ 0.99
EXD3-201ENST00000340951 TBC1D9Q6ZT07 1266 aa21.22■□□□□ 0.99
EXD3-201ENST00000340951 SBNO2Q9Y2G9 1366 aa21.22■□□□□ 0.99
EXD3-201ENST00000340951 A0A0U1RQG5 324 aaPredicted RBP21.22■□□□□ 0.99
EXD3-201ENST00000340951 PRIM1P49642 420 aaKnown RBP21.22■□□□□ 0.99
EXD3-201ENST00000340951 MINK1Q8N4C8 1332 aaPredicted RBP21.22■□□□□ 0.99
EXD3-201ENST00000340951 RPGRIP1LQ68CZ1 1315 aa21.21■□□□□ 0.99
EXD3-201ENST00000340951 ANKRD45Q5TZF3 282 aa21.21■□□□□ 0.99
EXD3-201ENST00000340951 EVC2Q86UK5 1308 aa21.21■□□□□ 0.99
EXD3-201ENST00000340951 GGNBP2Q9H3C7 697 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms