RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 RSPH4AQ5TD94 716 aa18.48■□□□□ 0.55
ATXN3-201ENST00000340660 CAMKK2Q96RR4 588 aa18.48■□□□□ 0.55
ATXN3-201ENST00000340660 TNS1Q9HBL0 1735 aaKnown RBP18.48■□□□□ 0.55
ATXN3-201ENST00000340660 CIZ1Q9ULV3 898 aaPredicted RBP18.47■□□□□ 0.55
ATXN3-201ENST00000340660 C1orf167Q5SNV9 1468 aa18.46■□□□□ 0.55
ATXN3-201ENST00000340660 COLQQ9Y215 455 aaPredicted RBP18.46■□□□□ 0.55
ATXN3-201ENST00000340660 CHD4Q14839 1912 aa18.46■□□□□ 0.55
ATXN3-201ENST00000340660 IER5LQ5T953 404 aa18.45■□□□□ 0.54
ATXN3-201ENST00000340660 NOS1P29475 1434 aa18.44■□□□□ 0.54
ATXN3-201ENST00000340660 UBTFP17480 764 aaKnown RBP18.44■□□□□ 0.54
ATXN3-201ENST00000340660 ZNF467Q7Z7K2 595 aaPredicted RBP18.44■□□□□ 0.54
ATXN3-201ENST00000340660 ARHGEF5Q12774 1597 aa18.43■□□□□ 0.54
ATXN3-201ENST00000340660 ADGRL3Q9HAR2 1447 aa18.43■□□□□ 0.54
ATXN3-201ENST00000340660 TSPY4P0CV99 314 aa18.43■□□□□ 0.54
ATXN3-201ENST00000340660 TSPY10P0CW01 314 aa18.43■□□□□ 0.54
ATXN3-201ENST00000340660 VPS72Q15906 364 aa18.42■□□□□ 0.54
ATXN3-201ENST00000340660 FAM182BQ5T319 152 aa18.42■□□□□ 0.54
ATXN3-201ENST00000340660 ORAI2Q96SN7 254 aa18.42■□□□□ 0.54
ATXN3-201ENST00000340660 XRN1Q8IZH2 1706 aaKnown RBP18.41■□□□□ 0.54
ATXN3-201ENST00000340660 PCDH10Q9P2E7 1040 aa18.41■□□□□ 0.54
ATXN3-201ENST00000340660 MYO5BQ9ULV0 1848 aa18.4■□□□□ 0.54
ATXN3-201ENST00000340660 SEC24BO95487 1268 aa18.38■□□□□ 0.53
ATXN3-201ENST00000340660 SLC52A1Q9NWF4 448 aa18.38■□□□□ 0.53
ATXN3-201ENST00000340660 NRKQ7Z2Y5 1582 aa18.38■□□□□ 0.53
ATXN3-201ENST00000340660 NALCNQ8IZF0 1738 aa18.37■□□□□ 0.53
ATXN3-201ENST00000340660 HDGFP51858 240 aaKnown RBP18.37■□□□□ 0.53
ATXN3-201ENST00000340660 RPRD2Q5VT52 1461 aaKnown RBP18.37■□□□□ 0.53
ATXN3-201ENST00000340660 RREB1Q92766 1687 aa18.37■□□□□ 0.53
ATXN3-201ENST00000340660 NUP188Q5SRE5 1749 aa18.37■□□□□ 0.53
ATXN3-201ENST00000340660 ADGRB2O60241 1585 aa18.35■□□□□ 0.53
ATXN3-201ENST00000340660 PARD3Q8TEW0 1356 aa18.35■□□□□ 0.53
ATXN3-201ENST00000340660 A0A0G2JS52 829 aa18.35■□□□□ 0.53
ATXN3-201ENST00000340660 PRELPP51888 382 aa18.35■□□□□ 0.53
ATXN3-201ENST00000340660 MYT1Q01538 1121 aa18.35■□□□□ 0.53
ATXN3-201ENST00000340660 CCDC9Q9Y3X0 531 aaKnown RBP18.34■□□□□ 0.53
ATXN3-201ENST00000340660 DUOX2Q9NRD8 1548 aa18.33■□□□□ 0.53
ATXN3-201ENST00000340660 GCC2Q8IWJ2 1684 aa18.33■□□□□ 0.52
ATXN3-201ENST00000340660 TMEM131LA2VDJ0 1609 aa18.33■□□□□ 0.52
ATXN3-201ENST00000340660 LMTK2Q8IWU2 1503 aa18.33■□□□□ 0.52
ATXN3-201ENST00000340660 PXDNQ92626 1479 aa18.33■□□□□ 0.52
ATXN3-201ENST00000340660 HSPA6P17066 643 aa18.32■□□□□ 0.52
ATXN3-201ENST00000340660 COL13A1Q5TAT6 717 aaPredicted RBP18.32■□□□□ 0.52
ATXN3-201ENST00000340660 MAMSTRQ6ZN01 415 aa18.32■□□□□ 0.52
ATXN3-201ENST00000340660 SHANK3Q9BYB0 1731 aa18.32■□□□□ 0.52
ATXN3-201ENST00000340660 CEP162Q5TB80 1403 aa18.32■□□□□ 0.52
ATXN3-201ENST00000340660 MYOM1P52179 1685 aa18.31■□□□□ 0.52
ATXN3-201ENST00000340660 IRX5P78411 483 aaPredicted RBP18.31■□□□□ 0.52
ATXN3-201ENST00000340660 NBPF8Q3BBV2 869 aa18.31■□□□□ 0.52
ATXN3-201ENST00000340660 NBPF14Q5TI25 921 aa18.31■□□□□ 0.52
ATXN3-201ENST00000340660 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.31■□□□□ 0.52
ATXN3-201ENST00000340660 FAM98CQ17RN3 349 aaKnown RBP18.3■□□□□ 0.52
ATXN3-201ENST00000340660 USP32Q8NFA0 1604 aa18.3■□□□□ 0.52
ATXN3-201ENST00000340660 PTPN23Q9H3S7 1636 aa18.3■□□□□ 0.52
ATXN3-201ENST00000340660 TRIM37O94972 964 aa18.29■□□□□ 0.52
ATXN3-201ENST00000340660 PSEN1P49768 467 aa18.29■□□□□ 0.52
ATXN3-201ENST00000340660 APBA3O96018 575 aa18.28■□□□□ 0.52
ATXN3-201ENST00000340660 XPCQ01831 940 aaPredicted RBP18.27■□□□□ 0.52
ATXN3-201ENST00000340660 SYT17Q9BSW7 474 aa18.27■□□□□ 0.52
ATXN3-201ENST00000340660 PLCH1Q4KWH8 1693 aa18.26■□□□□ 0.51
ATXN3-201ENST00000340660 FHDC1Q9C0D6 1143 aaPredicted RBP18.25■□□□□ 0.51
ATXN3-201ENST00000340660 SCUBE2Q9NQ36 999 aa18.25■□□□□ 0.51
ATXN3-201ENST00000340660 KANK1Q14678 1352 aa18.25■□□□□ 0.51
ATXN3-201ENST00000340660 ADGRL2O95490 1459 aa18.25■□□□□ 0.51
ATXN3-201ENST00000340660 NPHP3Q7Z494 1330 aa18.24■□□□□ 0.51
ATXN3-201ENST00000340660 NWD2Q9ULI1 1742 aa18.24■□□□□ 0.51
ATXN3-201ENST00000340660 PLCG2P16885 1265 aa18.24■□□□□ 0.51
ATXN3-201ENST00000340660 PTGER2P43116 358 aa18.24■□□□□ 0.51
ATXN3-201ENST00000340660 ERBINQ96RT1 1412 aa18.23■□□□□ 0.51
ATXN3-201ENST00000340660 PDAP1Q13442 181 aaKnown RBP18.23■□□□□ 0.51
ATXN3-201ENST00000340660 NRXN3Q9Y4C0 1643 aa18.23■□□□□ 0.51
ATXN3-201ENST00000340660 CASZ1Q86V15 1759 aa18.22■□□□□ 0.51
ATXN3-201ENST00000340660 METP08581 1390 aa18.22■□□□□ 0.51
ATXN3-201ENST00000340660 FAM83GA6ND36 823 aa18.22■□□□□ 0.51
ATXN3-201ENST00000340660 PDGFDQ9GZP0 370 aaPredicted RBP18.21■□□□□ 0.51
ATXN3-201ENST00000340660 GOLGB1Q14789 3259 aaKnown RBP18.2■□□□□ 0.5
ATXN3-201ENST00000340660 KIF15Q9NS87 1388 aa18.19■□□□□ 0.5
ATXN3-201ENST00000340660 TNS4Q8IZW8 715 aa18.19■□□□□ 0.5
ATXN3-201ENST00000340660 OCEL1Q9H607 264 aa18.19■□□□□ 0.5
ATXN3-201ENST00000340660 DLC1Q96QB1 1528 aa18.18■□□□□ 0.5
ATXN3-201ENST00000340660 ZBTB7AO95365 584 aa18.18■□□□□ 0.5
ATXN3-201ENST00000340660 THSD7AQ9UPZ6 1657 aa18.18■□□□□ 0.5
ATXN3-201ENST00000340660 FOXO3O43524 673 aa18.17■□□□□ 0.5
ATXN3-201ENST00000340660 CHGAP10645 457 aaKnown RBP18.17■□□□□ 0.5
ATXN3-201ENST00000340660 FAM196AQ6ZSG2 479 aa18.15■□□□□ 0.5
ATXN3-201ENST00000340660 NRAPQ86VF7 1730 aa18.15■□□□□ 0.5
ATXN3-201ENST00000340660 GOLGA2Q08379 1002 aa18.13■□□□□ 0.49
ATXN3-201ENST00000340660 ESCO1Q5FWF5 840 aa18.13■□□□□ 0.49
ATXN3-201ENST00000340660 ANO8Q9HCE9 1232 aaPredicted RBP18.13■□□□□ 0.49
ATXN3-201ENST00000340660 SPATA31A3Q5VYP0 1347 aa18.13■□□□□ 0.49
ATXN3-201ENST00000340660 MKRN3Q13064 507 aaKnown RBP18.12■□□□□ 0.49
ATXN3-201ENST00000340660 DNAJC5GQ8N7S2 189 aa18.12■□□□□ 0.49
ATXN3-201ENST00000340660 RRP7BPQ9NSQ0 103 aa18.12■□□□□ 0.49
ATXN3-201ENST00000340660 CABLES1Q8TDN4 633 aa18.11■□□□□ 0.49
ATXN3-201ENST00000340660 GPR162Q16538 588 aa18.1■□□□□ 0.49
ATXN3-201ENST00000340660 PDCD7Q8N8D1 485 aaKnown RBP18.1■□□□□ 0.49
ATXN3-201ENST00000340660 NEXMIFQ5QGS0 1516 aa18.09■□□□□ 0.49
ATXN3-201ENST00000340660 RNF25Q96BH1 459 aaPredicted RBP18.09■□□□□ 0.49
ATXN3-201ENST00000340660 HAP1P54257 671 aaPredicted RBP18.08■□□□□ 0.48
ATXN3-201ENST00000340660 ATP10DQ9P241 1426 aa18.07■□□□□ 0.48
ATXN3-201ENST00000340660 SPATA31A5Q5VU36 1347 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms