RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 FOXO3O43524 673 aa18.14■□□□□ 0.49
GTF2F2-201ENST00000340473 NME9Q86XW9 330 aa18.14■□□□□ 0.49
GTF2F2-201ENST00000340473 ANKRD26Q9UPS8 1709 aa18.13■□□□□ 0.49
GTF2F2-201ENST00000340473 MYBBP1AQ9BQG0 1328 aaKnown RBP18.12■□□□□ 0.49
GTF2F2-201ENST00000340473 CCER2I3L3R5 266 aa18.12■□□□□ 0.49
GTF2F2-201ENST00000340473 PSME1Q06323 249 aa18.12■□□□□ 0.49
GTF2F2-201ENST00000340473 BRINP3Q76B58 766 aa18.12■□□□□ 0.49
GTF2F2-201ENST00000340473 MORC1Q86VD1 984 aa18.12■□□□□ 0.49
GTF2F2-201ENST00000340473 ZRANB1Q9UGI0 708 aa18.12■□□□□ 0.49
GTF2F2-201ENST00000340473 XPCQ01831 940 aaPredicted RBP18.11■□□□□ 0.49
GTF2F2-201ENST00000340473 CCDC184Q52MB2 194 aa18.11■□□□□ 0.49
GTF2F2-201ENST00000340473 TTC21AQ8NDW8 1320 aa18.1■□□□□ 0.49
GTF2F2-201ENST00000340473 DDX17Q92841 729 aaKnown RBP18.1■□□□□ 0.49
GTF2F2-201ENST00000340473 PIK3C2AO00443 1686 aa18.1■□□□□ 0.49
GTF2F2-201ENST00000340473 PPP2R1AP30153 589 aa18.09■□□□□ 0.49
GTF2F2-201ENST00000340473 TNNT2P45379 298 aaPredicted RBP18.09■□□□□ 0.49
GTF2F2-201ENST00000340473 TRPM3Q9HCF6 1732 aaPredicted RBP18.09■□□□□ 0.49
GTF2F2-201ENST00000340473 PAK3O75914 559 aaPredicted RBP18.08■□□□□ 0.49
GTF2F2-201ENST00000340473 BRD4O60885 1362 aaPredicted RBP18.08■□□□□ 0.49
GTF2F2-201ENST00000340473 KRT28Q7Z3Y7 464 aa18.07■□□□□ 0.48
GTF2F2-201ENST00000340473 NLRP13Q86W25 1043 aa18.07■□□□□ 0.48
GTF2F2-201ENST00000340473 NPHP3Q7Z494 1330 aa18.06■□□□□ 0.48
GTF2F2-201ENST00000340473 OVOS2A0A0J9YW53 1432 aa18.06■□□□□ 0.48
GTF2F2-201ENST00000340473 OVOS2Q6IE36 1432 aa18.06■□□□□ 0.48
GTF2F2-201ENST00000340473 COG3Q96JB2 828 aa18.06■□□□□ 0.48
GTF2F2-201ENST00000340473 PXDNQ92626 1479 aa18.05■□□□□ 0.48
GTF2F2-201ENST00000340473 USP31Q70CQ4 1352 aa18.04■□□□□ 0.48
GTF2F2-201ENST00000340473 NUTM2GQ5VZR2 741 aa18.04■□□□□ 0.48
GTF2F2-201ENST00000340473 ABTB2Q8N961 1025 aa18.04■□□□□ 0.48
GTF2F2-201ENST00000340473 MRS2Q9HD23 443 aa18.04■□□□□ 0.48
GTF2F2-201ENST00000340473 MARF1Q9Y4F3 1742 aaKnown RBP18.04■□□□□ 0.48
GTF2F2-201ENST00000340473 ROBO1Q9Y6N7 1651 aa18.04■□□□□ 0.48
GTF2F2-201ENST00000340473 USP54Q70EL1 1684 aa18.03■□□□□ 0.48
GTF2F2-201ENST00000340473 IQSEC2Q5JU85 1478 aa18.03■□□□□ 0.48
GTF2F2-201ENST00000340473 NHSL1Q5SYE7 1610 aa18.02■□□□□ 0.48
GTF2F2-201ENST00000340473 FBLN1P23142 703 aa18.02■□□□□ 0.48
GTF2F2-201ENST00000340473 NLRP6P59044 892 aa18.02■□□□□ 0.48
GTF2F2-201ENST00000340473 ALS2Q96Q42 1657 aa18.02■□□□□ 0.48
GTF2F2-201ENST00000340473 CERKQ8TCT0 537 aa18.02■□□□□ 0.47
GTF2F2-201ENST00000340473 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
GTF2F2-201ENST00000340473 SBNO1A3KN83 1393 aa18.01■□□□□ 0.47
GTF2F2-201ENST00000340473 TOM1O60784 492 aa18■□□□□ 0.47
GTF2F2-201ENST00000340473 SOS2Q07890 1332 aaPredicted RBP18■□□□□ 0.47
GTF2F2-201ENST00000340473 MTHFSP49914 203 aa17.99■□□□□ 0.47
GTF2F2-201ENST00000340473 LMOD2Q6P5Q4 547 aa17.99■□□□□ 0.47
GTF2F2-201ENST00000340473 TNS3Q68CZ2 1445 aa17.99■□□□□ 0.47
GTF2F2-201ENST00000340473 AATKQ6ZMQ8 1374 aa17.99■□□□□ 0.47
GTF2F2-201ENST00000340473 UBAP1LF5GYI3 381 aa17.98■□□□□ 0.47
GTF2F2-201ENST00000340473 SPATA31A3Q5VYP0 1347 aa17.98■□□□□ 0.47
GTF2F2-201ENST00000340473 MAP2P11137 1827 aaKnown RBP17.98■□□□□ 0.47
GTF2F2-201ENST00000340473 SOX12O15370 315 aa17.97■□□□□ 0.47
GTF2F2-201ENST00000340473 POLKQ9UBT6 870 aa17.97■□□□□ 0.47
GTF2F2-201ENST00000340473 RRS1Q15050 365 aaKnown RBP17.96■□□□□ 0.47
GTF2F2-201ENST00000340473 AHDC1Q5TGY3 1603 aaPredicted RBP17.96■□□□□ 0.47
GTF2F2-201ENST00000340473 PIP4K2BP78356 416 aa17.96■□□□□ 0.47
GTF2F2-201ENST00000340473 EMILIN1Q9Y6C2 1016 aa17.96■□□□□ 0.47
GTF2F2-201ENST00000340473 PNISRQ8TF01 805 aaKnown RBP17.95■□□□□ 0.46
GTF2F2-201ENST00000340473 SMG6Q86US8 1419 aaKnown RBP17.95■□□□□ 0.46
GTF2F2-201ENST00000340473 USP19O94966 1318 aa17.94■□□□□ 0.46
GTF2F2-201ENST00000340473 PLEKHG5O94827 1062 aa17.94■□□□□ 0.46
GTF2F2-201ENST00000340473 MED1Q15648 1581 aaPredicted RBP17.94■□□□□ 0.46
GTF2F2-201ENST00000340473 SLIT3O75094 1523 aa17.94■□□□□ 0.46
GTF2F2-201ENST00000340473 ARHGEF10O15013 1369 aa17.93■□□□□ 0.46
GTF2F2-201ENST00000340473 NFAT5O94916 1531 aa17.93■□□□□ 0.46
GTF2F2-201ENST00000340473 PPM1GO15355 546 aaPredicted RBP17.93■□□□□ 0.46
GTF2F2-201ENST00000340473 FAM9BQ8IZU0 186 aa17.93■□□□□ 0.46
GTF2F2-201ENST00000340473 COL3A1P02461 1466 aaPredicted RBP17.92■□□□□ 0.46
GTF2F2-201ENST00000340473 PEAK1Q9H792 1746 aa17.92■□□□□ 0.46
GTF2F2-201ENST00000340473 PNPLA6Q8IY17 1366 aa17.91■□□□□ 0.46
GTF2F2-201ENST00000340473 MAP3K19Q56UN5 1328 aa17.91■□□□□ 0.46
GTF2F2-201ENST00000340473 CRYBG1Q9Y4K1 1723 aa17.91■□□□□ 0.46
GTF2F2-201ENST00000340473 CFAP53Q96M91 514 aa17.91■□□□□ 0.46
GTF2F2-201ENST00000340473 CDK12Q9NYV4 1490 aaPredicted RBP17.91■□□□□ 0.46
GTF2F2-201ENST00000340473 PHLPP1O60346 1717 aa17.9■□□□□ 0.46
GTF2F2-201ENST00000340473 GCP02774 474 aa17.9■□□□□ 0.46
GTF2F2-201ENST00000340473 SHPRHQ149N8 1683 aa17.9■□□□□ 0.46
GTF2F2-201ENST00000340473 KCNH5Q8NCM2 988 aa17.9■□□□□ 0.46
GTF2F2-201ENST00000340473 PHRF1Q9P1Y6 1649 aaKnown RBP17.89■□□□□ 0.46
GTF2F2-201ENST00000340473 INSRP06213 1382 aa17.89■□□□□ 0.45
GTF2F2-201ENST00000340473 CABLES1Q8TDN4 633 aa17.89■□□□□ 0.45
GTF2F2-201ENST00000340473 COL16A1Q07092 1604 aaPredicted RBP17.89■□□□□ 0.45
GTF2F2-201ENST00000340473 LTN1O94822 1766 aa17.88■□□□□ 0.45
GTF2F2-201ENST00000340473 YTHDC1Q96MU7 727 aaKnown RBP17.88■□□□□ 0.45
GTF2F2-201ENST00000340473 LRRC59Q96AG4 307 aaKnown RBP17.87■□□□□ 0.45
GTF2F2-201ENST00000340473 WDR43Q15061 677 aaKnown RBP eCLIP17.86■□□□□ 0.45
GTF2F2-201ENST00000340473 FLT4P35916 1363 aa17.85■□□□□ 0.45
GTF2F2-201ENST00000340473 AMPHP49418 695 aa17.85■□□□□ 0.45
GTF2F2-201ENST00000340473 HSP90AB2PQ58FF8 381 aa17.85■□□□□ 0.45
GTF2F2-201ENST00000340473 ADAMTS8Q9UP79 889 aa17.85■□□□□ 0.45
GTF2F2-201ENST00000340473 ABCA3Q99758 1704 aa17.85■□□□□ 0.45
GTF2F2-201ENST00000340473 DIAPH1O60610 1272 aaKnown RBP17.84■□□□□ 0.45
GTF2F2-201ENST00000340473 ARHGEF25Q86VW2 580 aa17.84■□□□□ 0.45
GTF2F2-201ENST00000340473 ZBTB7CA1YPR0 619 aa17.83■□□□□ 0.45
GTF2F2-201ENST00000340473 HOXC9P31274 260 aa17.83■□□□□ 0.45
GTF2F2-201ENST00000340473 ZC3H6P61129 1189 aaKnown RBP17.83■□□□□ 0.45
GTF2F2-201ENST00000340473 KIF24Q5T7B8 1368 aa17.83■□□□□ 0.45
GTF2F2-201ENST00000340473 RTL1A6NKG5 1358 aa17.83■□□□□ 0.44
GTF2F2-201ENST00000340473 COL22A1Q8NFW1 1626 aaPredicted RBP17.82■□□□□ 0.44
GTF2F2-201ENST00000340473 IL13P35225 146 aa17.82■□□□□ 0.44
GTF2F2-201ENST00000340473 EIF4A2Q14240 407 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms