RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 FAM177BA6PVY3 158 aa11.5□□□□□ -0.57
RPGR-202ENST00000339363 KCNJ4P48050 445 aa11.5□□□□□ -0.57
RPGR-202ENST00000339363 TNPO1Q92973 898 aaKnown RBP11.5□□□□□ -0.57
RPGR-202ENST00000339363 ZBTB22O15209 634 aa11.49□□□□□ -0.57
RPGR-202ENST00000339363 CHAF1AQ13111 956 aaPredicted RBP11.49□□□□□ -0.57
RPGR-202ENST00000339363 SHPRHQ149N8 1683 aa11.49□□□□□ -0.57
RPGR-202ENST00000339363 RNF214Q8ND24 703 aa11.49□□□□□ -0.57
RPGR-202ENST00000339363 EIF2AK4Q9P2K8 1649 aaKnown RBP11.49□□□□□ -0.57
RPGR-202ENST00000339363 ABCC2Q92887 1545 aa11.49□□□□□ -0.57
RPGR-202ENST00000339363 CD2BP2O95400 341 aaKnown RBP11.48□□□□□ -0.57
RPGR-202ENST00000339363 MTHFSP49914 203 aa11.48□□□□□ -0.57
RPGR-202ENST00000339363 TAF3Q5VWG9 929 aa11.48□□□□□ -0.57
RPGR-202ENST00000339363 PDE3AQ14432 1141 aa11.47□□□□□ -0.57
RPGR-202ENST00000339363 ZNF830Q96NB3 372 aaPredicted RBP11.47□□□□□ -0.57
RPGR-202ENST00000339363 SAFB2Q14151 953 aaKnown RBP eCLIP11.47□□□□□ -0.57
RPGR-202ENST00000339363 NSD3Q9BZ95 1437 aa11.47□□□□□ -0.57
RPGR-202ENST00000339363 ZSCAN20P17040 1043 aaPredicted RBP11.47□□□□□ -0.57
RPGR-202ENST00000339363 CCDC39Q9UFE4 941 aa11.46□□□□□ -0.57
RPGR-202ENST00000339363 SPHKAPQ2M3C7 1700 aa11.46□□□□□ -0.57
RPGR-202ENST00000339363 KIF13AQ9H1H9 1805 aa11.46□□□□□ -0.57
RPGR-202ENST00000339363 MCTP1Q6DN14 999 aa11.46□□□□□ -0.57
RPGR-202ENST00000339363 FTSJ3Q8IY81 847 aaKnown RBP11.46□□□□□ -0.57
RPGR-202ENST00000339363 PDCL2Q8N4E4 241 aa11.46□□□□□ -0.57
RPGR-202ENST00000339363 PHF23Q9BUL5 403 aaPredicted RBP11.46□□□□□ -0.57
RPGR-202ENST00000339363 CGNL1Q0VF96 1302 aa11.46□□□□□ -0.58
RPGR-202ENST00000339363 DUOX2Q9NRD8 1548 aa11.46□□□□□ -0.58
RPGR-202ENST00000339363 PLXNC1O60486 1568 aa11.46□□□□□ -0.58
RPGR-202ENST00000339363 PMFBP1Q8TBY8 1022 aa11.46□□□□□ -0.58
RPGR-202ENST00000339363 TRERF1Q96PN7 1200 aa11.46□□□□□ -0.58
RPGR-202ENST00000339363 ZNF692Q9BU19 519 aaPredicted RBP11.46□□□□□ -0.58
RPGR-202ENST00000339363 KIF3BO15066 747 aa11.45□□□□□ -0.58
RPGR-202ENST00000339363 CERS3Q8IU89 383 aa11.45□□□□□ -0.58
RPGR-202ENST00000339363 TMEM51Q9NW97 253 aa11.45□□□□□ -0.58
RPGR-202ENST00000339363 IQSEC2Q5JU85 1478 aa11.44□□□□□ -0.58
RPGR-202ENST00000339363 ABCA6Q8N139 1617 aa11.44□□□□□ -0.58
RPGR-202ENST00000339363 IRX3P78415 501 aaPredicted RBP11.44□□□□□ -0.58
RPGR-202ENST00000339363 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
RPGR-202ENST00000339363 HMGN5P82970 282 aaKnown RBP11.44□□□□□ -0.58
RPGR-202ENST00000339363 RSPH4AQ5TD94 716 aa11.44□□□□□ -0.58
RPGR-202ENST00000339363 RWDD1Q9H446 243 aaPredicted RBP11.44□□□□□ -0.58
RPGR-202ENST00000339363 ZKSCAN5Q9Y2L8 839 aa11.44□□□□□ -0.58
RPGR-202ENST00000339363 KIF3AQ9Y496 699 aa11.44□□□□□ -0.58
RPGR-202ENST00000339363 CFAP65Q6ZU64 1925 aaKnown RBP11.44□□□□□ -0.58
RPGR-202ENST00000339363 TRIM27P14373 513 aa11.44□□□□□ -0.58
RPGR-202ENST00000339363 MORC1Q86VD1 984 aa11.44□□□□□ -0.58
RPGR-202ENST00000339363 NOL7Q9UMY1 257 aaKnown RBP11.44□□□□□ -0.58
RPGR-202ENST00000339363 CHGAP10645 457 aaKnown RBP11.43□□□□□ -0.58
RPGR-202ENST00000339363 PTPRTO14522 1441 aa11.43□□□□□ -0.58
RPGR-202ENST00000339363 TRPM2O94759 1503 aa11.43□□□□□ -0.58
RPGR-202ENST00000339363 JARID2Q92833 1246 aaPredicted RBP11.43□□□□□ -0.58
RPGR-202ENST00000339363 CCDC66A2RUB6 948 aa11.42□□□□□ -0.58
RPGR-202ENST00000339363 PPP1R9BQ96SB3 815 aa11.42□□□□□ -0.58
RPGR-202ENST00000339363 SCAPERQ9BY12 1400 aa11.42□□□□□ -0.58
RPGR-202ENST00000339363 KDM5AP29375 1690 aaKnown RBP11.42□□□□□ -0.58
RPGR-202ENST00000339363 ERICH4A6NGS2 130 aa11.42□□□□□ -0.58
RPGR-202ENST00000339363 EXOSC9Q06265 439 aaKnown RBP11.42□□□□□ -0.58
RPGR-202ENST00000339363 FOXD4L5Q5VV16 416 aaPredicted RBP11.42□□□□□ -0.58
RPGR-202ENST00000339363 FOXD4L4Q8WXT5 416 aaPredicted RBP11.42□□□□□ -0.58
RPGR-202ENST00000339363 SSH1Q8WYL5 1049 aa11.42□□□□□ -0.58
RPGR-202ENST00000339363 SPAG9O60271 1321 aaKnown RBP11.42□□□□□ -0.58
RPGR-202ENST00000339363 CD109Q6YHK3 1445 aa11.42□□□□□ -0.58
RPGR-202ENST00000339363 CHAMP1Q96JM3 812 aa11.42□□□□□ -0.58
RPGR-202ENST00000339363 MROH2AA6NES4 1674 aa11.42□□□□□ -0.58
RPGR-202ENST00000339363 APPP05067 770 aa11.41□□□□□ -0.58
RPGR-202ENST00000339363 C1orf115Q9H7X2 142 aa11.41□□□□□ -0.58
RPGR-202ENST00000339363 NPC1L1Q9UHC9 1359 aa11.41□□□□□ -0.58
RPGR-202ENST00000339363 RUNDC1Q96C34 613 aa11.41□□□□□ -0.58
RPGR-202ENST00000339363 POLR3AO14802 1390 aaPredicted RBP11.41□□□□□ -0.58
RPGR-202ENST00000339363 MVPQ14764 893 aaKnown RBP11.41□□□□□ -0.58
RPGR-202ENST00000339363 PLCH2O75038 1416 aa11.4□□□□□ -0.58
RPGR-202ENST00000339363 U2AF1L5P0DN76 240 aaPredicted RBP11.4□□□□□ -0.58
RPGR-202ENST00000339363 SSFA2P28290 1259 aa11.4□□□□□ -0.58
RPGR-202ENST00000339363 U2AF1Q01081 240 aaKnown RBP eCLIP11.4□□□□□ -0.58
RPGR-202ENST00000339363 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
RPGR-202ENST00000339363 ZFP91Q96JP5 570 aaPredicted RBP11.4□□□□□ -0.58
RPGR-202ENST00000339363 CABP2Q9NPB3 220 aa11.4□□□□□ -0.58
RPGR-202ENST00000339363 TRIM35Q9UPQ4 493 aa11.4□□□□□ -0.58
RPGR-202ENST00000339363 KIF2CQ99661 725 aa11.4□□□□□ -0.58
RPGR-202ENST00000339363 NOS1P29475 1434 aa11.4□□□□□ -0.59
RPGR-202ENST00000339363 TMEM57Q8N5G2 664 aa11.39□□□□□ -0.59
RPGR-202ENST00000339363 THUMPD2Q9BTF0 503 aaKnown RBP11.39□□□□□ -0.59
RPGR-202ENST00000339363 NOB1Q9ULX3 412 aaKnown RBP11.39□□□□□ -0.59
RPGR-202ENST00000339363 ATAD2Q6PL18 1390 aa11.39□□□□□ -0.59
RPGR-202ENST00000339363 GLI2P10070 1586 aa11.39□□□□□ -0.59
RPGR-202ENST00000339363 ABCC1P33527 1531 aa11.39□□□□□ -0.59
RPGR-202ENST00000339363 ZNF500O60304 480 aaPredicted RBP11.39□□□□□ -0.59
RPGR-202ENST00000339363 LNPKQ9C0E8 428 aa11.39□□□□□ -0.59
RPGR-202ENST00000339363 U2AF2P26368 475 aaKnown RBP eCLIP11.38□□□□□ -0.593e-6■■□□□ 13.6
RPGR-202ENST00000339363 ITPRIPQ8IWB1 547 aa11.38□□□□□ -0.59
RPGR-202ENST00000339363 GGNBP2Q9H3C7 697 aa11.38□□□□□ -0.59
RPGR-202ENST00000339363 ZFYVE16Q7Z3T8 1539 aa11.38□□□□□ -0.59
RPGR-202ENST00000339363 PRPF40AO75400 957 aaKnown RBP11.38□□□□□ -0.59
RPGR-202ENST00000339363 EFCAB2Q5VUJ9 269 aa11.38□□□□□ -0.59
RPGR-202ENST00000339363 DDIT3P35638 169 aa11.38□□□□□ -0.59
RPGR-202ENST00000339363 ATP2B3Q16720 1220 aa11.38□□□□□ -0.59
RPGR-202ENST00000339363 HS1BP3Q53T59 392 aa11.38□□□□□ -0.59
RPGR-202ENST00000339363 CDCA8Q53HL2 280 aa11.37□□□□□ -0.59
RPGR-202ENST00000339363 DNAJC2Q99543 621 aaKnown RBP11.37□□□□□ -0.59
RPGR-202ENST00000339363 CIZ1Q9ULV3 898 aaPredicted RBP11.37□□□□□ -0.59
RPGR-202ENST00000339363 ZNF518AQ6AHZ1 1483 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms