RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 RTEL1-TNFRSF6BF6WH68 1400 aa15.76■□□□□ 0.11
DFFB-202ENST00000339350 BECN1Q14457 450 aa15.76■□□□□ 0.11
DFFB-202ENST00000339350 RGS22Q8NE09 1264 aa15.76■□□□□ 0.11
DFFB-202ENST00000339350 CCDC94Q9BW85 323 aaPredicted RBP15.76■□□□□ 0.11
DFFB-202ENST00000339350 IRX3P78415 501 aaPredicted RBP15.76■□□□□ 0.11
DFFB-202ENST00000339350 DNTTIP2Q5QJE6 756 aaKnown RBP15.75■□□□□ 0.11
DFFB-202ENST00000339350 RARSP54136 660 aaKnown RBP15.74■□□□□ 0.11
DFFB-202ENST00000339350 ZSCAN30Q86W11 494 aa15.74■□□□□ 0.11
DFFB-202ENST00000339350 CEP152O94986 1710 aa15.74■□□□□ 0.11
DFFB-202ENST00000339350 MSNP26038 577 aaKnown RBP15.74■□□□□ 0.11
DFFB-202ENST00000339350 PDE3AQ14432 1141 aa15.74■□□□□ 0.11
DFFB-202ENST00000339350 PDZRN3Q9UPQ7 1066 aa15.74■□□□□ 0.11
DFFB-202ENST00000339350 TRPM2O94759 1503 aa15.74■□□□□ 0.11
DFFB-202ENST00000339350 CBX1P83916 185 aa15.73■□□□□ 0.11
DFFB-202ENST00000339350 NSD3Q9BZ95 1437 aa15.73■□□□□ 0.11
DFFB-202ENST00000339350 MTHFSP49914 203 aa15.73■□□□□ 0.11
DFFB-202ENST00000339350 GTPBP4Q9BZE4 634 aaKnown RBP15.73■□□□□ 0.11
DFFB-202ENST00000339350 LETM1O95202 739 aaPredicted RBP15.72■□□□□ 0.11
DFFB-202ENST00000339350 MLECQ14165 292 aa15.72■□□□□ 0.11
DFFB-202ENST00000339350 CGNQ9P2M7 1197 aaKnown RBP15.72■□□□□ 0.11
DFFB-202ENST00000339350 STK26Q9P289 416 aa15.71■□□□□ 0.11
DFFB-202ENST00000339350 NOS1P29475 1434 aa15.71■□□□□ 0.11
DFFB-202ENST00000339350 KIDINS220Q9ULH0 1771 aa15.71■□□□□ 0.11
DFFB-202ENST00000339350 INO80Q9ULG1 1556 aaPredicted RBP15.71■□□□□ 0.11
DFFB-202ENST00000339350 GAS2L3Q86XJ1 694 aa15.71■□□□□ 0.11
DFFB-202ENST00000339350 TSR2Q969E8 191 aaKnown RBP15.71■□□□□ 0.11
DFFB-202ENST00000339350 NPC1L1Q9UHC9 1359 aa15.7■□□□□ 0.1
DFFB-202ENST00000339350 PTPRTO14522 1441 aa15.7■□□□□ 0.1
DFFB-202ENST00000339350 MAPK8IP3Q9UPT6 1336 aa15.7■□□□□ 0.1
DFFB-202ENST00000339350 DYNC1I1O14576 645 aa15.7■□□□□ 0.1
DFFB-202ENST00000339350 CERS3Q8IU89 383 aa15.7■□□□□ 0.1
DFFB-202ENST00000339350 RUNDC1Q96C34 613 aa15.7■□□□□ 0.1
DFFB-202ENST00000339350 ABCA6Q8N139 1617 aa15.69■□□□□ 0.1
DFFB-202ENST00000339350 ZNF518AQ6AHZ1 1483 aa15.69■□□□□ 0.1
DFFB-202ENST00000339350 U2AF1L5P0DN76 240 aaPredicted RBP15.69■□□□□ 0.1
DFFB-202ENST00000339350 U2AF1Q01081 240 aaKnown RBP eCLIP15.69■□□□□ 0.1
DFFB-202ENST00000339350 XPCQ01831 940 aaPredicted RBP15.68■□□□□ 0.1
DFFB-202ENST00000339350 MROH1Q8NDA8 1641 aa15.68■□□□□ 0.1
DFFB-202ENST00000339350 VIRMAQ69YN4 1812 aaKnown RBP15.68■□□□□ 0.1
DFFB-202ENST00000339350 HSP90B1P14625 803 aaKnown RBP15.68■□□□□ 0.1
DFFB-202ENST00000339350 FAM69CQ0P6D2 419 aa15.68■□□□□ 0.1
DFFB-202ENST00000339350 TBC1D2Q9BYX2 928 aa15.68■□□□□ 0.1
DFFB-202ENST00000339350 ARAP3Q8WWN8 1544 aa15.67■□□□□ 0.1
DFFB-202ENST00000339350 NPATQ14207 1427 aa15.67■□□□□ 0.1
DFFB-202ENST00000339350 FBXO31Q5XUX0 539 aaPredicted RBP15.67■□□□□ 0.1
DFFB-202ENST00000339350 IGSF3O75054 1194 aa15.67■□□□□ 0.1
DFFB-202ENST00000339350 MFAP1P55081 439 aaKnown RBP15.67■□□□□ 0.1
DFFB-202ENST00000339350 UPF2Q9HAU5 1272 aaKnown RBP15.67■□□□□ 0.1
DFFB-202ENST00000339350 PMFBP1Q8TBY8 1022 aa15.66■□□□□ 0.1
DFFB-202ENST00000339350 POLR3AO14802 1390 aaPredicted RBP15.66■□□□□ 0.1
DFFB-202ENST00000339350 POGZQ7Z3K3 1410 aa15.65■□□□□ 0.1
DFFB-202ENST00000339350 YEATS2Q9ULM3 1422 aa15.65■□□□□ 0.1
DFFB-202ENST00000339350 NLRP1Q9C000 1473 aa15.65■□□□□ 0.1
DFFB-202ENST00000339350 TET3O43151 1660 aa15.65■□□□□ 0.1
DFFB-202ENST00000339350 PPRC1Q5VV67 1664 aaKnown RBP15.65■□□□□ 0.1
DFFB-202ENST00000339350 U2SURPO15042 1029 aaKnown RBP15.65■□□□□ 0.1
DFFB-202ENST00000339350 ISY1Q9ULR0 285 aaKnown RBP15.64■□□□□ 0.09
DFFB-202ENST00000339350 MAP3K4Q9Y6R4 1608 aa15.64■□□□□ 0.09
DFFB-202ENST00000339350 CCDC173Q0VFZ6 552 aa15.63■□□□□ 0.09
DFFB-202ENST00000339350 IDI1Q13907 227 aa15.63■□□□□ 0.09
DFFB-202ENST00000339350 AEBP1Q8IUX7 1158 aa15.63■□□□□ 0.09
DFFB-202ENST00000339350 TBC1D32Q96NH3 1257 aa15.63■□□□□ 0.09
DFFB-202ENST00000339350 DEPDC5O75140 1603 aa15.63■□□□□ 0.09
DFFB-202ENST00000339350 CABP2Q9NPB3 220 aa15.63■□□□□ 0.09
DFFB-202ENST00000339350 MROH2AA6NES4 1674 aa15.62■□□□□ 0.09
DFFB-202ENST00000339350 SHPRHQ149N8 1683 aa15.62■□□□□ 0.09
DFFB-202ENST00000339350 RWDD1Q9H446 243 aaPredicted RBP15.62■□□□□ 0.09
DFFB-202ENST00000339350 JARID2Q92833 1246 aaPredicted RBP15.62■□□□□ 0.09
DFFB-202ENST00000339350 ITPRIPQ8IWB1 547 aa15.62■□□□□ 0.09
DFFB-202ENST00000339350 SMC4Q9NTJ3 1288 aa15.62■□□□□ 0.09
DFFB-202ENST00000339350 PATL2C9JE40 543 aaKnown RBP15.61■□□□□ 0.09
DFFB-202ENST00000339350 IRX5P78411 483 aaPredicted RBP15.61■□□□□ 0.09
DFFB-202ENST00000339350 EXOSC9Q06265 439 aaKnown RBP15.61■□□□□ 0.09
DFFB-202ENST00000339350 TAF3Q5VWG9 929 aa15.61■□□□□ 0.09
DFFB-202ENST00000339350 TSPOAP1O95153 1857 aa15.61■□□□□ 0.09
DFFB-202ENST00000339350 FRMPD1Q5SYB0 1578 aa15.61■□□□□ 0.09
DFFB-202ENST00000339350 HDAC5Q9UQL6 1122 aa15.61■□□□□ 0.09
DFFB-202ENST00000339350 EFCAB6Q5THR3 1501 aa15.61■□□□□ 0.09
DFFB-202ENST00000339350 KIF1BO60333 1816 aa15.6■□□□□ 0.09
DFFB-202ENST00000339350 APPP05067 770 aa15.6■□□□□ 0.09
DFFB-202ENST00000339350 MVPQ14764 893 aaKnown RBP15.6■□□□□ 0.09
DFFB-202ENST00000339350 CFAP53Q96M91 514 aa15.6■□□□□ 0.09
DFFB-202ENST00000339350 ATP2B3Q16720 1220 aa15.6■□□□□ 0.09
DFFB-202ENST00000339350 VWDEQ8N2E2 1590 aa15.6■□□□□ 0.09
DFFB-202ENST00000339350 DZIP1LQ8IYY4 767 aaKnown RBP15.6■□□□□ 0.09
DFFB-202ENST00000339350 PPP1R9BQ96SB3 815 aa15.6■□□□□ 0.09
DFFB-202ENST00000339350 GGNBP2Q9H3C7 697 aa15.6■□□□□ 0.09
DFFB-202ENST00000339350 ZKSCAN2Q63HK3 967 aa15.59■□□□□ 0.09
DFFB-202ENST00000339350 MYCNP04198 464 aaPredicted RBP15.59■□□□□ 0.09
DFFB-202ENST00000339350 WDR63Q8IWG1 891 aa15.59■□□□□ 0.09
DFFB-202ENST00000339350 TSC1Q92574 1164 aa15.59■□□□□ 0.09
DFFB-202ENST00000339350 NINLQ9Y2I6 1382 aa15.59■□□□□ 0.09
DFFB-202ENST00000339350 NASPP49321 788 aaPredicted RBP15.58■□□□□ 0.09
DFFB-202ENST00000339350 NGEFQ8N5V2 710 aa15.58■□□□□ 0.09
DFFB-202ENST00000339350 SLC52A1Q9NWF4 448 aa15.58■□□□□ 0.09
DFFB-202ENST00000339350 TRIM27P14373 513 aa15.57■□□□□ 0.08
DFFB-202ENST00000339350 C22orf23Q9BZE7 217 aa15.57■□□□□ 0.08
DFFB-202ENST00000339350 SSH1Q8WYL5 1049 aa15.57■□□□□ 0.08
DFFB-202ENST00000339350 SASS6Q6UVJ0 657 aa15.57■□□□□ 0.08
DFFB-202ENST00000339350 PHF23Q9BUL5 403 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms