RNA–Protein interactions for RNA: ENST00000338684.9

MUC1-202, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-202ENST00000338684 SIN3AQ96ST3 1273 aa21.49■■□□□ 1.03
MUC1-202ENST00000338684 NBPF1Q3BBV0 1214 aa21.48■■□□□ 1.03
MUC1-202ENST00000338684 CDK19Q9BWU1 502 aa21.48■■□□□ 1.03
MUC1-202ENST00000338684 BTG4Q9NY30 223 aa21.48■■□□□ 1.03
MUC1-202ENST00000338684 PAK3O75914 559 aaPredicted RBP21.47■■□□□ 1.03
MUC1-202ENST00000338684 NEUROD1Q13562 356 aa21.47■■□□□ 1.03
MUC1-202ENST00000338684 ATP7BP35670 1465 aa21.46■■□□□ 1.03
MUC1-202ENST00000338684 DEFB132Q7Z7B7 95 aa21.45■■□□□ 1.02
MUC1-202ENST00000338684 ZRANB1Q9UGI0 708 aa21.44■■□□□ 1.02
MUC1-202ENST00000338684 BLMP54132 1417 aaPredicted RBP21.44■■□□□ 1.02
MUC1-202ENST00000338684 NRAPQ86VF7 1730 aa21.43■■□□□ 1.02
MUC1-202ENST00000338684 KRT27Q7Z3Y8 459 aa21.43■■□□□ 1.02
MUC1-202ENST00000338684 CRYBG1Q9Y4K1 1723 aa21.43■■□□□ 1.02
MUC1-202ENST00000338684 FAM98CQ17RN3 349 aaKnown RBP21.42■■□□□ 1.02
MUC1-202ENST00000338684 COL14A1Q05707 1796 aaKnown RBP21.41■■□□□ 1.02
MUC1-202ENST00000338684 ACEP12821 1306 aa21.4■■□□□ 1.02
MUC1-202ENST00000338684 NBPF8Q3BBV2 869 aa21.4■■□□□ 1.02
MUC1-202ENST00000338684 NUTM2GQ5VZR2 741 aa21.4■■□□□ 1.02
MUC1-202ENST00000338684 KIAA1210Q9ULL0 1709 aa21.39■■□□□ 1.01
MUC1-202ENST00000338684 CCDC61Q9Y6R9 512 aa21.39■■□□□ 1.01
MUC1-202ENST00000338684 POLR3AO14802 1390 aaPredicted RBP21.38■■□□□ 1.01
MUC1-202ENST00000338684 TONSLQ96HA7 1378 aa21.38■■□□□ 1.01
MUC1-202ENST00000338684 SPATA31A5Q5VU36 1347 aa21.38■■□□□ 1.01
MUC1-202ENST00000338684 SPATA31A7Q8IWB4 1347 aa21.38■■□□□ 1.01
MUC1-202ENST00000338684 A0A0G2JS52 829 aa21.38■■□□□ 1.01
MUC1-202ENST00000338684 PLEKHG3A1L390 1219 aa21.38■■□□□ 1.01
MUC1-202ENST00000338684 MYT1Q01538 1121 aa21.38■■□□□ 1.01
MUC1-202ENST00000338684 CHRNA2Q15822 529 aa21.38■■□□□ 1.01
MUC1-202ENST00000338684 PRDM11Q9NQV5 511 aa21.38■■□□□ 1.01
MUC1-202ENST00000338684 ITSN1Q15811 1721 aa21.38■■□□□ 1.01
MUC1-202ENST00000338684 FAM182BQ5T319 152 aa21.37■■□□□ 1.01
MUC1-202ENST00000338684 KIAA0232Q92628 1395 aa21.36■■□□□ 1.01
MUC1-202ENST00000338684 ZC3H6P61129 1189 aaKnown RBP21.36■■□□□ 1.01
MUC1-202ENST00000338684 L3MBTL2Q969R5 705 aa21.36■■□□□ 1.01
MUC1-202ENST00000338684 TOPAZ1Q8N9V7 1692 aa21.34■■□□□ 1.01
MUC1-202ENST00000338684 SF3B2Q13435 895 aaKnown RBP21.34■■□□□ 1.01
MUC1-202ENST00000338684 CABP2Q9NPB3 220 aa21.33■■□□□ 1.01
MUC1-202ENST00000338684 TIMELESSQ9UNS1 1208 aa21.33■■□□□ 1.01
MUC1-202ENST00000338684 CENPJQ9HC77 1338 aaPredicted RBP21.31■■□□□ 1
MUC1-202ENST00000338684 PHRF1Q9P1Y6 1649 aaKnown RBP21.31■■□□□ 1
MUC1-202ENST00000338684 SRPK2P78362 688 aaKnown RBP21.31■■□□□ 1
MUC1-202ENST00000338684 ABTB2Q8N961 1025 aa21.31■■□□□ 1
MUC1-202ENST00000338684 STRN4Q9NRL3 753 aa21.31■■□□□ 1
MUC1-202ENST00000338684 SPATA31A1Q5TZJ5 1347 aa21.3■■□□□ 1
MUC1-202ENST00000338684 THSD7AQ9UPZ6 1657 aa21.28■■□□□ 1
MUC1-202ENST00000338684 PPIP5K1Q6PFW1 1433 aa21.28■■□□□ 1
MUC1-202ENST00000338684 CABP1Q9NZU7 370 aa21.26■□□□□ 0.99
MUC1-202ENST00000338684 USP35Q9P2H5 1018 aa21.26■□□□□ 0.99
MUC1-202ENST00000338684 USP19O94966 1318 aa21.26■□□□□ 0.99
MUC1-202ENST00000338684 CAMTA1Q9Y6Y1 1673 aa21.25■□□□□ 0.99
MUC1-202ENST00000338684 BAG6P46379 1132 aa21.25■□□□□ 0.99
MUC1-202ENST00000338684 EN1Q05925 392 aaPredicted RBP21.25■□□□□ 0.99
MUC1-202ENST00000338684 NRKQ7Z2Y5 1582 aa21.24■□□□□ 0.99
MUC1-202ENST00000338684 GCP02774 474 aa21.24■□□□□ 0.99
MUC1-202ENST00000338684 LARP1Q6PKG0 1096 aaKnown RBP21.24■□□□□ 0.99
MUC1-202ENST00000338684 EVA1CP58658 441 aa21.23■□□□□ 0.99
MUC1-202ENST00000338684 NLRP13Q86W25 1043 aa21.23■□□□□ 0.99
MUC1-202ENST00000338684 QRICH2Q9H0J4 1663 aa21.23■□□□□ 0.99
MUC1-202ENST00000338684 CPDO75976 1380 aa21.23■□□□□ 0.99
MUC1-202ENST00000338684 TRPM1Q7Z4N2 1603 aa21.22■□□□□ 0.99
MUC1-202ENST00000338684 SSH2Q76I76 1423 aa21.22■□□□□ 0.99
MUC1-202ENST00000338684 PSDA5PKW4 1024 aaPredicted RBP21.22■□□□□ 0.99
MUC1-202ENST00000338684 BARGINQ6ZT62 677 aa21.2■□□□□ 0.98
MUC1-202ENST00000338684 LMO7Q8WWI1 1683 aa21.2■□□□□ 0.98
MUC1-202ENST00000338684 TRIM37O94972 964 aa21.19■□□□□ 0.98
MUC1-202ENST00000338684 USP6P35125 1406 aa21.19■□□□□ 0.98
MUC1-202ENST00000338684 NLRP6P59044 892 aa21.18■□□□□ 0.98
MUC1-202ENST00000338684 EZH2Q15910 746 aaKnown RBP21.18■□□□□ 0.98
MUC1-202ENST00000338684 RGPD1P0DJD0 1748 aa21.18■□□□□ 0.98
MUC1-202ENST00000338684 FAM196AQ6ZSG2 479 aa21.17■□□□□ 0.98
MUC1-202ENST00000338684 TNS1Q9HBL0 1735 aaKnown RBP21.16■□□□□ 0.98
MUC1-202ENST00000338684 BRD4O60885 1362 aaPredicted RBP21.16■□□□□ 0.98
MUC1-202ENST00000338684 EVC2Q86UK5 1308 aa21.16■□□□□ 0.98
MUC1-202ENST00000338684 TCP11L2Q8N4U5 519 aa21.16■□□□□ 0.98
MUC1-202ENST00000338684 CAMKK2Q96RR4 588 aa21.15■□□□□ 0.98
MUC1-202ENST00000338684 DISP2A7MBM2 1401 aa21.14■□□□□ 0.98
MUC1-202ENST00000338684 ROCK2O75116 1388 aaKnown RBP21.14■□□□□ 0.98
MUC1-202ENST00000338684 ZBTB7CA1YPR0 619 aa21.14■□□□□ 0.97
MUC1-202ENST00000338684 PDE3BQ13370 1112 aa21.14■□□□□ 0.97
MUC1-202ENST00000338684 COL5A2P05997 1499 aaPredicted RBP21.13■□□□□ 0.97
MUC1-202ENST00000338684 APBA3O96018 575 aa21.12■□□□□ 0.97
MUC1-202ENST00000338684 R3HDM1Q15032 1099 aaKnown RBP21.12■□□□□ 0.97
MUC1-202ENST00000338684 AXIN2Q9Y2T1 843 aa21.12■□□□□ 0.97
MUC1-202ENST00000338684 SLIT3O75094 1523 aa21.12■□□□□ 0.97
MUC1-202ENST00000338684 THRAP3Q9Y2W1 955 aaKnown RBP21.11■□□□□ 0.97
MUC1-202ENST00000338684 AATKQ6ZMQ8 1374 aa21.1■□□□□ 0.97
MUC1-202ENST00000338684 TTC21BQ7Z4L5 1316 aa21.1■□□□□ 0.97
MUC1-202ENST00000338684 PIK3C2AO00443 1686 aa21.1■□□□□ 0.97
MUC1-202ENST00000338684 ZNF692Q9BU19 519 aaPredicted RBP21.09■□□□□ 0.97
MUC1-202ENST00000338684 COL18A1P39060 1754 aa21.09■□□□□ 0.97
MUC1-202ENST00000338684 CRB1P82279 1406 aa21.08■□□□□ 0.97
MUC1-202ENST00000338684 LRP5O75197 1615 aa21.07■□□□□ 0.96
MUC1-202ENST00000338684 ARHGEF25Q86VW2 580 aa21.07■□□□□ 0.96
MUC1-202ENST00000338684 CPSF1Q10570 1443 aaKnown RBP21.06■□□□□ 0.96
MUC1-202ENST00000338684 SOX12O15370 315 aa21.05■□□□□ 0.96
MUC1-202ENST00000338684 AKAP12Q02952 1782 aa21.05■□□□□ 0.96
MUC1-202ENST00000338684 PARP4Q9UKK3 1724 aaKnown RBP21.04■□□□□ 0.96
MUC1-202ENST00000338684 TOM1L2Q6ZVM7 507 aa21.04■□□□□ 0.96
MUC1-202ENST00000338684 CARD11Q9BXL7 1154 aa21.04■□□□□ 0.96
MUC1-202ENST00000338684 KTN1Q86UP2 1357 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms