RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 TRIM44Q96DX7 344 aaPredicted RBP14.95□□□□□ -0.02
RBM39-202ENST00000338163 HSCBQ8IWL3 235 aa14.94□□□□□ -0.02
RBM39-202ENST00000338163 GRPEL1Q9HAV7 217 aa14.94□□□□□ -0.02
RBM39-202ENST00000338163 VIRMAQ69YN4 1812 aaKnown RBP14.94□□□□□ -0.02
RBM39-202ENST00000338163 CFAP70Q5T0N1 1121 aa14.93□□□□□ -0.02
RBM39-202ENST00000338163 TCP11L2Q8N4U5 519 aa14.93□□□□□ -0.02
RBM39-202ENST00000338163 STAC3Q96MF2 364 aa14.93□□□□□ -0.02
RBM39-202ENST00000338163 CARD14Q9BXL6 1004 aa14.93□□□□□ -0.02
RBM39-202ENST00000338163 RIMS2Q9UQ26 1411 aa14.93□□□□□ -0.02
RBM39-202ENST00000338163 TXNDC2Q86VQ3 553 aa14.92□□□□□ -0.02
RBM39-202ENST00000338163 ZMYND15Q9H091 742 aa14.92□□□□□ -0.02
RBM39-202ENST00000338163 ESPNB1AK53 854 aa14.92□□□□□ -0.02
RBM39-202ENST00000338163 TMEM2Q9UHN6 1383 aa14.92□□□□□ -0.02
RBM39-202ENST00000338163 LTKP29376 864 aa14.91□□□□□ -0.02
RBM39-202ENST00000338163 HDGFP51858 240 aaKnown RBP14.91□□□□□ -0.02
RBM39-202ENST00000338163 EID1Q9Y6B2 187 aa14.91□□□□□ -0.02
RBM39-202ENST00000338163 SCAF11Q99590 1463 aaKnown RBP14.91□□□□□ -0.02
RBM39-202ENST00000338163 MYO5BQ9ULV0 1848 aa14.91□□□□□ -0.02
RBM39-202ENST00000338163 DDX11L8A8MPP1 907 aa14.9□□□□□ -0.02
RBM39-202ENST00000338163 MORC1Q86VD1 984 aa14.9□□□□□ -0.02
RBM39-202ENST00000338163 NGEFQ8N5V2 710 aa14.9□□□□□ -0.02
RBM39-202ENST00000338163 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.9□□□□□ -0.02
RBM39-202ENST00000338163 NEURL4Q96JN8 1562 aa14.9□□□□□ -0.02
RBM39-202ENST00000338163 FOXD4L1Q9NU39 408 aa14.9□□□□□ -0.02
RBM39-202ENST00000338163 ERBB4Q15303 1308 aa14.9□□□□□ -0.02
RBM39-202ENST00000338163 NEXMIFQ5QGS0 1516 aa14.89□□□□□ -0.03
RBM39-202ENST00000338163 MYO3AQ8NEV4 1616 aa14.89□□□□□ -0.03
RBM39-202ENST00000338163 RRP9O43818 475 aaKnown RBP14.89□□□□□ -0.03
RBM39-202ENST00000338163 TMEM132EQ6IEE7 984 aa14.89□□□□□ -0.03
RBM39-202ENST00000338163 MVPQ14764 893 aaKnown RBP14.88□□□□□ -0.03
RBM39-202ENST00000338163 RUNDC1Q96C34 613 aa14.88□□□□□ -0.03
RBM39-202ENST00000338163 SETD1BQ9UPS6 1966 aaKnown RBP14.88□□□□□ -0.03
RBM39-202ENST00000338163 CEP170BQ9Y4F5 1589 aaPredicted RBP14.88□□□□□ -0.03
RBM39-202ENST00000338163 NPC1L1Q9UHC9 1359 aa14.88□□□□□ -0.03
RBM39-202ENST00000338163 HSPA2P54652 639 aa14.88□□□□□ -0.03
RBM39-202ENST00000338163 MYOM2P54296 1465 aa14.87□□□□□ -0.03
RBM39-202ENST00000338163 ITPRIPQ8IWB1 547 aa14.87□□□□□ -0.03
RBM39-202ENST00000338163 HSP90AB1P08238 724 aaKnown RBP14.87□□□□□ -0.03
RBM39-202ENST00000338163 UBR1Q8IWV7 1749 aa14.87□□□□□ -0.03
RBM39-202ENST00000338163 ZFYVE9O95405 1425 aa14.87□□□□□ -0.03
RBM39-202ENST00000338163 AAMPQ13685 434 aa14.86□□□□□ -0.03
RBM39-202ENST00000338163 DZIP1LQ8IYY4 767 aaKnown RBP14.86□□□□□ -0.03
RBM39-202ENST00000338163 ZKSCAN2Q63HK3 967 aa14.86□□□□□ -0.03
RBM39-202ENST00000338163 TSR2Q969E8 191 aaKnown RBP14.86□□□□□ -0.03
RBM39-202ENST00000338163 C14orf93Q9H972 538 aaKnown RBP14.86□□□□□ -0.03
RBM39-202ENST00000338163 SLC26A8Q96RN1 970 aa14.85□□□□□ -0.03
RBM39-202ENST00000338163 SMC4Q9NTJ3 1288 aa14.85□□□□□ -0.03
RBM39-202ENST00000338163 ANKLE2Q86XL3 938 aa14.85□□□□□ -0.03
RBM39-202ENST00000338163 PPLO60437 1756 aa14.85□□□□□ -0.03
RBM39-202ENST00000338163 STK26Q9P289 416 aa14.85□□□□□ -0.03
RBM39-202ENST00000338163 GAS2L3Q86XJ1 694 aa14.84□□□□□ -0.03
RBM39-202ENST00000338163 TNPO1Q92973 898 aaKnown RBP14.84□□□□□ -0.03
RBM39-202ENST00000338163 NRXN1Q9ULB1 1477 aa14.83□□□□□ -0.03
RBM39-202ENST00000338163 U2AF1L5P0DN76 240 aaPredicted RBP14.83□□□□□ -0.04
RBM39-202ENST00000338163 U2AF1Q01081 240 aaKnown RBP eCLIP14.83□□□□□ -0.048e-22■□□□□ 9.7
RBM39-202ENST00000338163 MTHFSP49914 203 aa14.83□□□□□ -0.04
RBM39-202ENST00000338163 GBP4Q96PP9 640 aa14.83□□□□□ -0.04
RBM39-202ENST00000338163 IFT172Q9UG01 1749 aa14.82□□□□□ -0.04
RBM39-202ENST00000338163 TRAK1Q9UPV9 953 aa14.82□□□□□ -0.04
RBM39-202ENST00000338163 POLR3AO14802 1390 aaPredicted RBP14.82□□□□□ -0.04
RBM39-202ENST00000338163 WDR63Q8IWG1 891 aa14.82□□□□□ -0.04
RBM39-202ENST00000338163 LNPKQ9C0E8 428 aa14.82□□□□□ -0.04
RBM39-202ENST00000338163 NCKAP5LQ9HCH0 1330 aa14.82□□□□□ -0.04
RBM39-202ENST00000338163 IQGAP1P46940 1657 aa14.81□□□□□ -0.04
RBM39-202ENST00000338163 SLC12A5Q9H2X9 1139 aa14.81□□□□□ -0.04
RBM39-202ENST00000338163 ZNF692Q9BU19 519 aaPredicted RBP14.81□□□□□ -0.04
RBM39-202ENST00000338163 MYOM1P52179 1685 aa14.8□□□□□ -0.04
RBM39-202ENST00000338163 NSD3Q9BZ95 1437 aa14.8□□□□□ -0.04
RBM39-202ENST00000338163 ARHGAP23Q9P227 1491 aa14.8□□□□□ -0.04
RBM39-202ENST00000338163 SLIT1O75093 1534 aa14.8□□□□□ -0.04
RBM39-202ENST00000338163 TRIM27P14373 513 aa14.8□□□□□ -0.04
RBM39-202ENST00000338163 CFAP53Q96M91 514 aa14.8□□□□□ -0.04
RBM39-202ENST00000338163 KDM5AP29375 1690 aaKnown RBP14.79□□□□□ -0.04
RBM39-202ENST00000338163 PLEKHG1Q9ULL1 1385 aa14.79□□□□□ -0.04
RBM39-202ENST00000338163 EXOSC9Q06265 439 aaKnown RBP14.79□□□□□ -0.04
RBM39-202ENST00000338163 ANP32BQ92688 251 aaKnown RBP14.79□□□□□ -0.04
RBM39-202ENST00000338163 ISY1Q9ULR0 285 aaKnown RBP14.78□□□□□ -0.04
RBM39-202ENST00000338163 SAFB2Q14151 953 aaKnown RBP eCLIP14.78□□□□□ -0.04
RBM39-202ENST00000338163 KIAA1211Q6ZU35 1233 aa14.78□□□□□ -0.04
RBM39-202ENST00000338163 DDX19BQ9UMR2 479 aa14.78□□□□□ -0.04
RBM39-202ENST00000338163 U2SURPO15042 1029 aaKnown RBP14.77□□□□□ -0.04
RBM39-202ENST00000338163 METP08581 1390 aa14.77□□□□□ -0.04
RBM39-202ENST00000338163 SSH1Q8WYL5 1049 aa14.77□□□□□ -0.05
RBM39-202ENST00000338163 ZNF142P52746 1687 aaPredicted RBP14.77□□□□□ -0.05
RBM39-202ENST00000338163 NASPP49321 788 aaPredicted RBP14.76□□□□□ -0.05
RBM39-202ENST00000338163 ALKQ9UM73 1620 aa14.76□□□□□ -0.05
RBM39-202ENST00000338163 NOB1Q9ULX3 412 aaKnown RBP14.76□□□□□ -0.05
RBM39-202ENST00000338163 NCLP19338 710 aaKnown RBP14.75□□□□□ -0.05
RBM39-202ENST00000338163 HDAC1Q13547 482 aaPredicted RBP14.75□□□□□ -0.05
RBM39-202ENST00000338163 TMEM57Q8N5G2 664 aa14.75□□□□□ -0.05
RBM39-202ENST00000338163 PHF23Q9BUL5 403 aaPredicted RBP14.75□□□□□ -0.05
RBM39-202ENST00000338163 LMTK3Q96Q04 1460 aa14.75□□□□□ -0.05
RBM39-202ENST00000338163 CD2BP2O95400 341 aaKnown RBP14.75□□□□□ -0.05
RBM39-202ENST00000338163 ATF7IPQ6VMQ6 1270 aa14.75□□□□□ -0.05
RBM39-202ENST00000338163 DDX49Q9Y6V7 483 aaKnown RBP14.75□□□□□ -0.05
RBM39-202ENST00000338163 ADAMTS13Q76LX8 1427 aa14.75□□□□□ -0.05
RBM39-202ENST00000338163 SKOR2Q2VWA4 1001 aaPredicted RBP14.74□□□□□ -0.05
RBM39-202ENST00000338163 RBM42Q9BTD8 480 aaKnown RBP14.74□□□□□ -0.05
RBM39-202ENST00000338163 GOLGA6L22H0YM25 854 aa14.74□□□□□ -0.05
RBM39-202ENST00000338163 MSNP26038 577 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms