RNA–Protein interactions for RNA: ENST00000338150.8

CAGE1-202, Transcript of cancer antigen 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAGE1, Length 2,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-202ENST00000338150 LMOD2Q6P5Q4 547 aa11.8□□□□□ -0.52
CAGE1-202ENST00000338150 PHF8Q9UPP1 1060 aa11.8□□□□□ -0.52
CAGE1-202ENST00000338150 CPSF1Q10570 1443 aaKnown RBP11.8□□□□□ -0.52
CAGE1-202ENST00000338150 C19orf44Q9H6X5 657 aa11.79□□□□□ -0.52
CAGE1-202ENST00000338150 ATF3P18847 181 aa11.79□□□□□ -0.52
CAGE1-202ENST00000338150 MTHFSP49914 203 aa11.79□□□□□ -0.52
CAGE1-202ENST00000338150 RRS1Q15050 365 aaKnown RBP11.79□□□□□ -0.52
CAGE1-202ENST00000338150 CDC42BPGQ6DT37 1551 aa11.79□□□□□ -0.52
CAGE1-202ENST00000338150 PLEKHG3A1L390 1219 aa11.79□□□□□ -0.52
CAGE1-202ENST00000338150 PNISRQ8TF01 805 aaKnown RBP11.79□□□□□ -0.52
CAGE1-202ENST00000338150 FMN2Q9NZ56 1722 aa11.78□□□□□ -0.52
CAGE1-202ENST00000338150 TTC21BQ7Z4L5 1316 aa11.78□□□□□ -0.52
CAGE1-202ENST00000338150 NINLQ9Y2I6 1382 aa11.78□□□□□ -0.52
CAGE1-202ENST00000338150 TOPAZ1Q8N9V7 1692 aa11.77□□□□□ -0.52
CAGE1-202ENST00000338150 EMILIN1Q9Y6C2 1016 aa11.77□□□□□ -0.53
CAGE1-202ENST00000338150 LRRC7Q96NW7 1537 aa11.77□□□□□ -0.53
CAGE1-202ENST00000338150 USP6P35125 1406 aa11.77□□□□□ -0.53
CAGE1-202ENST00000338150 ZBTB7CA1YPR0 619 aa11.76□□□□□ -0.53
CAGE1-202ENST00000338150 PSME1Q06323 249 aa11.76□□□□□ -0.53
CAGE1-202ENST00000338150 CCDC146Q8IYE0 955 aa11.76□□□□□ -0.53
CAGE1-202ENST00000338150 XIRP1Q702N8 1843 aaKnown RBP11.76□□□□□ -0.53
CAGE1-202ENST00000338150 ITSN1Q15811 1721 aa11.76□□□□□ -0.53
CAGE1-202ENST00000338150 EDC4Q6P2E9 1401 aaKnown RBP11.75□□□□□ -0.53
CAGE1-202ENST00000338150 ADAMTS8Q9UP79 889 aa11.75□□□□□ -0.53
CAGE1-202ENST00000338150 C1orf167Q5SNV9 1468 aa11.75□□□□□ -0.53
CAGE1-202ENST00000338150 BRD4O60885 1362 aaPredicted RBP11.75□□□□□ -0.53
CAGE1-202ENST00000338150 NLRP6P59044 892 aa11.74□□□□□ -0.53
CAGE1-202ENST00000338150 ABTB2Q8N961 1025 aa11.74□□□□□ -0.53
CAGE1-202ENST00000338150 MSH6P52701 1360 aa11.74□□□□□ -0.53
CAGE1-202ENST00000338150 AKAP12Q02952 1782 aa11.74□□□□□ -0.53
CAGE1-202ENST00000338150 COG3Q96JB2 828 aa11.74□□□□□ -0.53
CAGE1-202ENST00000338150 NPC1L1Q9UHC9 1359 aa11.74□□□□□ -0.53
CAGE1-202ENST00000338150 ZNF692Q9BU19 519 aaPredicted RBP11.73□□□□□ -0.53
CAGE1-202ENST00000338150 MON2Q7Z3U7 1717 aa11.73□□□□□ -0.53
CAGE1-202ENST00000338150 MST1RQ04912 1400 aa11.73□□□□□ -0.53
CAGE1-202ENST00000338150 SCAF1Q9H7N4 1312 aaKnown RBP11.73□□□□□ -0.53
CAGE1-202ENST00000338150 POLR3AO14802 1390 aaPredicted RBP11.72□□□□□ -0.53
CAGE1-202ENST00000338150 ANKARQ7Z5J8 1434 aa11.72□□□□□ -0.53
CAGE1-202ENST00000338150 KIF20BQ96Q89 1820 aa11.72□□□□□ -0.53
CAGE1-202ENST00000338150 POLKQ9UBT6 870 aa11.72□□□□□ -0.53
CAGE1-202ENST00000338150 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
CAGE1-202ENST00000338150 DMRT2Q9Y5R5 561 aa11.72□□□□□ -0.53
CAGE1-202ENST00000338150 U2SURPO15042 1029 aaKnown RBP11.71□□□□□ -0.53
CAGE1-202ENST00000338150 KRT28Q7Z3Y7 464 aa11.71□□□□□ -0.53
CAGE1-202ENST00000338150 CADPS2Q86UW7 1296 aa11.71□□□□□ -0.53
CAGE1-202ENST00000338150 SSH2Q76I76 1423 aa11.71□□□□□ -0.54
CAGE1-202ENST00000338150 WDR43Q15061 677 aaKnown RBP eCLIP11.71□□□□□ -0.54
CAGE1-202ENST00000338150 BRINP3Q76B58 766 aa11.71□□□□□ -0.54
CAGE1-202ENST00000338150 SLAIN2Q9P270 581 aa11.71□□□□□ -0.54
CAGE1-202ENST00000338150 NRKQ7Z2Y5 1582 aa11.7□□□□□ -0.54
CAGE1-202ENST00000338150 PIK3C2AO00443 1686 aa11.69□□□□□ -0.54
CAGE1-202ENST00000338150 PIP4K2BP78356 416 aa11.69□□□□□ -0.54
CAGE1-202ENST00000338150 RRP7AQ9Y3A4 280 aaKnown RBP11.69□□□□□ -0.54
CAGE1-202ENST00000338150 NSD2O96028 1365 aa11.69□□□□□ -0.54
CAGE1-202ENST00000338150 NEUROD2Q15784 382 aa11.68□□□□□ -0.54
CAGE1-202ENST00000338150 LTV1Q96GA3 475 aaPredicted RBP11.68□□□□□ -0.54
CAGE1-202ENST00000338150 HSP90AB2PQ58FF8 381 aa11.68□□□□□ -0.54
CAGE1-202ENST00000338150 HMOX1P09601 288 aa11.67□□□□□ -0.54
CAGE1-202ENST00000338150 U2AF1L5P0DN76 240 aaPredicted RBP11.67□□□□□ -0.54
CAGE1-202ENST00000338150 U2AF1Q01081 240 aaKnown RBP eCLIP11.67□□□□□ -0.54
CAGE1-202ENST00000338150 MAP2P11137 1827 aaKnown RBP11.67□□□□□ -0.54
CAGE1-202ENST00000338150 OVOS2A0A0J9YW53 1432 aa11.67□□□□□ -0.54
CAGE1-202ENST00000338150 OVOS2Q6IE36 1432 aa11.67□□□□□ -0.54
CAGE1-202ENST00000338150 MAP3K19Q56UN5 1328 aa11.67□□□□□ -0.54
CAGE1-202ENST00000338150 CENPBP07199 599 aaPredicted RBP11.67□□□□□ -0.54
CAGE1-202ENST00000338150 ANKRD26Q9UPS8 1709 aa11.66□□□□□ -0.54
CAGE1-202ENST00000338150 ZC3H6P61129 1189 aaKnown RBP11.66□□□□□ -0.54
CAGE1-202ENST00000338150 TTC21AQ8NDW8 1320 aa11.65□□□□□ -0.54
CAGE1-202ENST00000338150 APAF1O14727 1248 aa11.65□□□□□ -0.54
CAGE1-202ENST00000338150 HOMEZQ8IX15 550 aa11.65□□□□□ -0.54
CAGE1-202ENST00000338150 CFAP53Q96M91 514 aa11.65□□□□□ -0.54
CAGE1-202ENST00000338150 PODXL2Q9NZ53 605 aa11.65□□□□□ -0.54
CAGE1-202ENST00000338150 LTBP4Q8N2S1 1624 aa11.64□□□□□ -0.55
CAGE1-202ENST00000338150 AEBP1Q8IUX7 1158 aa11.64□□□□□ -0.55
CAGE1-202ENST00000338150 SHPRHQ149N8 1683 aa11.64□□□□□ -0.55
CAGE1-202ENST00000338150 DIAPH1O60610 1272 aaKnown RBP11.63□□□□□ -0.55
CAGE1-202ENST00000338150 AMPHP49418 695 aa11.63□□□□□ -0.55
CAGE1-202ENST00000338150 CDCA7LQ96GN5 454 aa11.63□□□□□ -0.55
CAGE1-202ENST00000338150 DCCP43146 1447 aa11.63□□□□□ -0.55
CAGE1-202ENST00000338150 COL3A1P02461 1466 aaPredicted RBP11.62□□□□□ -0.55
CAGE1-202ENST00000338150 PEAK1Q9H792 1746 aa11.62□□□□□ -0.55
CAGE1-202ENST00000338150 MARF1Q9Y4F3 1742 aaKnown RBP11.62□□□□□ -0.55
CAGE1-202ENST00000338150 CHRNA2Q15822 529 aa11.62□□□□□ -0.55
CAGE1-202ENST00000338150 USHBP1Q8N6Y0 703 aa11.62□□□□□ -0.55
CAGE1-202ENST00000338150 UBE2Q2Q8WVN8 375 aa11.62□□□□□ -0.55
CAGE1-202ENST00000338150 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
CAGE1-202ENST00000338150 EIF4A2Q14240 407 aaKnown RBP11.62□□□□□ -0.55
CAGE1-202ENST00000338150 NPHP3Q7Z494 1330 aa11.62□□□□□ -0.55
CAGE1-202ENST00000338150 GCP02774 474 aa11.62□□□□□ -0.55
CAGE1-202ENST00000338150 NCOA3Q9Y6Q9 1424 aa11.61□□□□□ -0.55
CAGE1-202ENST00000338150 USP31Q70CQ4 1352 aa11.61□□□□□ -0.55
CAGE1-202ENST00000338150 IL13P35225 146 aa11.6□□□□□ -0.55
CAGE1-202ENST00000338150 TRPM3Q9HCF6 1732 aaPredicted RBP11.6□□□□□ -0.55
CAGE1-202ENST00000338150 PXDNQ92626 1479 aa11.6□□□□□ -0.55
CAGE1-202ENST00000338150 UBAP1LF5GYI3 381 aa11.6□□□□□ -0.55
CAGE1-202ENST00000338150 AXIN2Q9Y2T1 843 aa11.6□□□□□ -0.55
CAGE1-202ENST00000338150 LRRC59Q96AG4 307 aaKnown RBP11.59□□□□□ -0.55
CAGE1-202ENST00000338150 PHACTR3Q96KR7 559 aa11.59□□□□□ -0.55
CAGE1-202ENST00000338150 BLMP54132 1417 aaPredicted RBP11.59□□□□□ -0.55
CAGE1-202ENST00000338150 HOXC9P31274 260 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms