RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL2A1-201ENST00000337299 ARHGAP5Q13017 1502 aa15.97■□□□□ 0.15
COL2A1-201ENST00000337299 NKTRP30414 1462 aaKnown RBP15.97■□□□□ 0.15
COL2A1-201ENST00000337299 C9orf84Q5VXU9 1444 aa15.97■□□□□ 0.15
COL2A1-201ENST00000337299 DHX29Q7Z478 1369 aaKnown RBP15.97■□□□□ 0.15
COL2A1-201ENST00000337299 C16orf45Q96MC5 204 aaPredicted RBP15.97■□□□□ 0.15
COL2A1-201ENST00000337299 GGNBP2Q9H3C7 697 aa15.97■□□□□ 0.15
COL2A1-201ENST00000337299 H3BQV1 296 aa15.97■□□□□ 0.15
COL2A1-201ENST00000337299 IFFO2Q5TF58 517 aa15.97■□□□□ 0.15
COL2A1-201ENST00000337299 CCDC94Q9BW85 323 aaPredicted RBP15.97■□□□□ 0.15
COL2A1-201ENST00000337299 SF3A1Q15459 793 aaKnown RBP15.96■□□□□ 0.15
COL2A1-201ENST00000337299 STK31Q9BXU1 1019 aa15.96■□□□□ 0.15
COL2A1-201ENST00000337299 SMAP1Q8IYB5 467 aaPredicted RBP15.96■□□□□ 0.15
COL2A1-201ENST00000337299 NECTIN2Q92692 538 aa15.96■□□□□ 0.15
COL2A1-201ENST00000337299 APPP05067 770 aa15.96■□□□□ 0.14
COL2A1-201ENST00000337299 TPM4P67936 248 aa15.96■□□□□ 0.14
COL2A1-201ENST00000337299 UPF3BQ9BZI7 483 aaKnown RBP15.96■□□□□ 0.14
COL2A1-201ENST00000337299 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.14
COL2A1-201ENST00000337299 GAS2L2Q8NHY3 880 aa15.95■□□□□ 0.14
COL2A1-201ENST00000337299 TERF2IPQ9NYB0 399 aa15.95■□□□□ 0.14
COL2A1-201ENST00000337299 RLBP1P12271 317 aa15.95■□□□□ 0.14
COL2A1-201ENST00000337299 DAPK1P53355 1430 aa15.94■□□□□ 0.14
COL2A1-201ENST00000337299 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.94■□□□□ 0.14
COL2A1-201ENST00000337299 SSH1Q8WYL5 1049 aa15.94■□□□□ 0.14
COL2A1-201ENST00000337299 API5Q9BZZ5 524 aaKnown RBP15.94■□□□□ 0.14
COL2A1-201ENST00000337299 ARHGEF11O15085 1522 aa15.94■□□□□ 0.14
COL2A1-201ENST00000337299 CREBRFQ8IUR6 639 aa15.94■□□□□ 0.14
COL2A1-201ENST00000337299 SLC12A5Q9H2X9 1139 aa15.94■□□□□ 0.14
COL2A1-201ENST00000337299 ADCY5O95622 1261 aa15.94■□□□□ 0.14
COL2A1-201ENST00000337299 GCC1Q96CN9 775 aa15.94■□□□□ 0.14
COL2A1-201ENST00000337299 FMNL2Q96PY5 1086 aa15.94■□□□□ 0.14
COL2A1-201ENST00000337299 PLEKHH1Q9ULM0 1364 aa15.94■□□□□ 0.14
COL2A1-201ENST00000337299 FILIP1Q7Z7B0 1213 aa15.93■□□□□ 0.14
COL2A1-201ENST00000337299 RBSNQ9H1K0 784 aa15.93■□□□□ 0.14
COL2A1-201ENST00000337299 ARGLU1Q9NWB6 273 aaPredicted RBP15.93■□□□□ 0.14
COL2A1-201ENST00000337299 NINLQ9Y2I6 1382 aa15.93■□□□□ 0.14
COL2A1-201ENST00000337299 NOLC1Q14978 699 aaKnown RBP eCLIP15.93■□□□□ 0.14
COL2A1-201ENST00000337299 C17orf53Q8N3J3 647 aaPredicted RBP15.93■□□□□ 0.14
COL2A1-201ENST00000337299 GRIN2AQ12879 1464 aa15.93■□□□□ 0.14
COL2A1-201ENST00000337299 TPM3P06753 285 aa15.93■□□□□ 0.14
COL2A1-201ENST00000337299 TBC1D9Q6ZT07 1266 aa15.93■□□□□ 0.14
COL2A1-201ENST00000337299 HCLS1P14317 486 aaPredicted RBP15.92■□□□□ 0.14
COL2A1-201ENST00000337299 IQGAP2Q13576 1575 aa15.92■□□□□ 0.14
COL2A1-201ENST00000337299 DIAPH1O60610 1272 aaKnown RBP15.92■□□□□ 0.14
COL2A1-201ENST00000337299 RPRD2Q5VT52 1461 aaKnown RBP15.92■□□□□ 0.14
COL2A1-201ENST00000337299 ERBINQ96RT1 1412 aa15.92■□□□□ 0.14
COL2A1-201ENST00000337299 TAF3Q5VWG9 929 aa15.92■□□□□ 0.14
COL2A1-201ENST00000337299 NGDNQ8NEJ9 315 aaKnown RBP15.92■□□□□ 0.14
COL2A1-201ENST00000337299 MCM5P33992 734 aa15.91■□□□□ 0.14
COL2A1-201ENST00000337299 FAM184AQ8NB25 1140 aa15.91■□□□□ 0.14
COL2A1-201ENST00000337299 LTV1Q96GA3 475 aaPredicted RBP15.91■□□□□ 0.14
COL2A1-201ENST00000337299 EHBP1L1Q8N3D4 1523 aa15.91■□□□□ 0.14
COL2A1-201ENST00000337299 RAB3GAP1Q15042 981 aa15.91■□□□□ 0.14
COL2A1-201ENST00000337299 ERBB4Q15303 1308 aa15.91■□□□□ 0.14
COL2A1-201ENST00000337299 CABP2Q9NPB3 220 aa15.91■□□□□ 0.14
COL2A1-201ENST00000337299 PTPN23Q9H3S7 1636 aa15.91■□□□□ 0.14
COL2A1-201ENST00000337299 BIVM-ERCC5R4GMW8 1640 aa15.91■□□□□ 0.14
COL2A1-201ENST00000337299 TRIM27P14373 513 aa15.91■□□□□ 0.14
COL2A1-201ENST00000337299 EID1Q9Y6B2 187 aa15.91■□□□□ 0.14
COL2A1-201ENST00000337299 CCDC192P0DO97 292 aa15.9■□□□□ 0.14
COL2A1-201ENST00000337299 CAMK4Q16566 473 aa15.9■□□□□ 0.14
COL2A1-201ENST00000337299 CEBPZQ03701 1054 aaKnown RBP15.9■□□□□ 0.14
COL2A1-201ENST00000337299 WDR63Q8IWG1 891 aa15.9■□□□□ 0.14
COL2A1-201ENST00000337299 ERC2O15083 957 aa15.89■□□□□ 0.13
COL2A1-201ENST00000337299 CCDC9Q9Y3X0 531 aaKnown RBP15.89■□□□□ 0.13
COL2A1-201ENST00000337299 ABCC5O15440 1437 aa15.89■□□□□ 0.13
COL2A1-201ENST00000337299 FSD2A1L4K1 749 aa15.89■□□□□ 0.13
COL2A1-201ENST00000337299 LRSAM1Q6UWE0 723 aa15.89■□□□□ 0.13
COL2A1-201ENST00000337299 FAM177A1Q8N128 213 aaPredicted RBP15.89■□□□□ 0.13
COL2A1-201ENST00000337299 ZFP91Q96JP5 570 aaPredicted RBP15.89■□□□□ 0.13
COL2A1-201ENST00000337299 PRIMPOLQ96LW4 560 aa15.89■□□□□ 0.13
COL2A1-201ENST00000337299 LARP6Q9BRS8 491 aaKnown RBP15.89■□□□□ 0.13
COL2A1-201ENST00000337299 POLR3GO15318 223 aaPredicted RBP15.89■□□□□ 0.13
COL2A1-201ENST00000337299 LETM1O95202 739 aaPredicted RBP15.89■□□□□ 0.13
COL2A1-201ENST00000337299 GTF2F1P35269 517 aaKnown RBP eCLIP15.89■□□□□ 0.13
COL2A1-201ENST00000337299 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.89■□□□□ 0.133e-6■■■■□ 22.9
COL2A1-201ENST00000337299 V9GYY5 206 aaPredicted RBP15.89■□□□□ 0.13
COL2A1-201ENST00000337299 WDR33Q9C0J8 1336 aaKnown RBP15.89■□□□□ 0.13
COL2A1-201ENST00000337299 NOL7Q9UMY1 257 aaKnown RBP15.88■□□□□ 0.13
COL2A1-201ENST00000337299 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.88■□□□□ 0.13
COL2A1-201ENST00000337299 SMARCA5O60264 1052 aaPredicted RBP15.88■□□□□ 0.13
COL2A1-201ENST00000337299 TNNT1P13805 278 aa15.88■□□□□ 0.13
COL2A1-201ENST00000337299 FERMT3Q86UX7 667 aa15.87■□□□□ 0.13
COL2A1-201ENST00000337299 U2AF2P26368 475 aaKnown RBP eCLIP15.87■□□□□ 0.131e-5■□□□□ 9.3
COL2A1-201ENST00000337299 EVC2Q86UK5 1308 aa15.87■□□□□ 0.13
COL2A1-201ENST00000337299 TRMT1Q9NXH9 659 aaKnown RBP15.86■□□□□ 0.13
COL2A1-201ENST00000337299 ZKSCAN1P17029 563 aaPredicted RBP15.86■□□□□ 0.13
COL2A1-201ENST00000337299 SMC5Q8IY18 1101 aa15.86■□□□□ 0.13
COL2A1-201ENST00000337299 GTPBP4Q9BZE4 634 aaKnown RBP15.86■□□□□ 0.13
COL2A1-201ENST00000337299 MCM2P49736 904 aa15.85■□□□□ 0.13
COL2A1-201ENST00000337299 ZGPATQ8N5A5 531 aaKnown RBP15.85■□□□□ 0.13
COL2A1-201ENST00000337299 LMOD3Q0VAK6 560 aa15.85■□□□□ 0.13
COL2A1-201ENST00000337299 THUMPD2Q9BTF0 503 aaKnown RBP15.85■□□□□ 0.13
COL2A1-201ENST00000337299 TNMDQ9H2S6 317 aa15.85■□□□□ 0.13
COL2A1-201ENST00000337299 MAP4K4O95819 1239 aaPredicted RBP15.85■□□□□ 0.13
COL2A1-201ENST00000337299 PLEKHH2Q8IVE3 1493 aa15.85■□□□□ 0.13
COL2A1-201ENST00000337299 DISP3Q9P2K9 1392 aa15.85■□□□□ 0.13
COL2A1-201ENST00000337299 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.85■□□□□ 0.13
COL2A1-201ENST00000337299 MAGI1Q96QZ7 1491 aaPredicted RBP15.84■□□□□ 0.13
COL2A1-201ENST00000337299 SMC2O95347 1197 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 198.4 ms