RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 FKBP5Q13451 457 aaPredicted RBP15.12■□□□□ 0.01
KPNA4-201ENST00000334256 SPOUT1Q5T280 376 aaKnown RBP15.12■□□□□ 0.01
KPNA4-201ENST00000334256 MPHOSPH8Q99549 860 aa15.12■□□□□ 0.01
KPNA4-201ENST00000334256 MYL6BP14649 208 aa15.12■□□□□ 0.01
KPNA4-201ENST00000334256 PMFBP1Q8TBY8 1022 aa15.12■□□□□ 0.01
KPNA4-201ENST00000334256 RWDD1Q9H446 243 aaPredicted RBP15.11■□□□□ 0.01
KPNA4-201ENST00000334256 MAGEC2Q9UBF1 373 aaPredicted RBP15.11■□□□□ 0.01
KPNA4-201ENST00000334256 CT47B1P0C2W7 299 aaPredicted RBP15.11■□□□□ 0.01
KPNA4-201ENST00000334256 TRERF1Q96PN7 1200 aa15.11■□□□□ 0.01
KPNA4-201ENST00000334256 VPS37CA5D8V6 355 aaPredicted RBP15.1■□□□□ 0.01
KPNA4-201ENST00000334256 PLS1Q14651 629 aa15.1■□□□□ 0.01
KPNA4-201ENST00000334256 TTC39AQ5SRH9 613 aa15.1■□□□□ 0.01
KPNA4-201ENST00000334256 NUTM1Q86Y26 1132 aa15.1■□□□□ 0.01
KPNA4-201ENST00000334256 NUP133Q8WUM0 1156 aa15.1■□□□□ 0.01
KPNA4-201ENST00000334256 GIMAP7Q8NHV1 300 aa15.1■□□□□ 0.01
KPNA4-201ENST00000334256 CCNB3Q8WWL7 1395 aa15.1■□□□□ 0.01
KPNA4-201ENST00000334256 FMNL2Q96PY5 1086 aa15.1■□□□□ 0.01
KPNA4-201ENST00000334256 FEZ1Q99689 392 aa15.1■□□□□ 0.01
KPNA4-201ENST00000334256 RSPH6AQ9H0K4 717 aa15.1■□□□□ 0.01
KPNA4-201ENST00000334256 DNAI2Q9GZS0 605 aa15.1■□□□□ 0.01
KPNA4-201ENST00000334256 GBP2P32456 591 aaPredicted RBP15.1■□□□□ 0.01
KPNA4-201ENST00000334256 CHMP5Q9NZZ3 219 aa15.09■□□□□ 0.01
KPNA4-201ENST00000334256 SIN3AQ96ST3 1273 aa15.09■□□□□ 0.01
KPNA4-201ENST00000334256 SIRT1Q96EB6 747 aa15.09■□□□□ 0.01
KPNA4-201ENST00000334256 GNL3LQ9NVN8 582 aaKnown RBP15.08■□□□□ 0.01
KPNA4-201ENST00000334256 CABP4P57796 275 aa15.08■□□□□ 0
KPNA4-201ENST00000334256 KIF20AO95235 890 aa15.08■□□□□ 0
KPNA4-201ENST00000334256 CEP63Q96MT8 703 aa15.08■□□□□ 0
KPNA4-201ENST00000334256 SOGA3Q5TF21 947 aa15.08■□□□□ 0
KPNA4-201ENST00000334256 FAM161AQ3B820 660 aa15.07■□□□□ 0
KPNA4-201ENST00000334256 NOP9Q86U38 636 aaKnown RBP15.07■□□□□ 0
KPNA4-201ENST00000334256 MYO6Q9UM54 1294 aa15.07■□□□□ 0
KPNA4-201ENST00000334256 CCDC112Q8NEF3 446 aa15.07■□□□□ 0
KPNA4-201ENST00000334256 HMOX1P09601 288 aa15.07■□□□□ 0
KPNA4-201ENST00000334256 TSPYL4Q9UJ04 414 aa15.06■□□□□ 0
KPNA4-201ENST00000334256 GPATCH11Q8N954 259 aa15.06■□□□□ 0
KPNA4-201ENST00000334256 ROCK2O75116 1388 aaKnown RBP15.06■□□□□ 0
KPNA4-201ENST00000334256 PPP4R4Q6NUP7 873 aa15.06■□□□□ 0
KPNA4-201ENST00000334256 RNF214Q8ND24 703 aa15.06■□□□□ 0
KPNA4-201ENST00000334256 EZRP15311 586 aaKnown RBP15.06■□□□□ 0
KPNA4-201ENST00000334256 ZKSCAN1P17029 563 aaPredicted RBP15.06■□□□□ 0
KPNA4-201ENST00000334256 CEBPZQ03701 1054 aaKnown RBP15.05■□□□□ 0
KPNA4-201ENST00000334256 SASS6Q6UVJ0 657 aa15.05■□□□□ 0
KPNA4-201ENST00000334256 ACBD3Q9H3P7 528 aa15.05■□□□□ 0
KPNA4-201ENST00000334256 ZFP91Q96JP5 570 aaPredicted RBP15.05■□□□□ 0
KPNA4-201ENST00000334256 ARGLU1Q9NWB6 273 aaPredicted RBP15.05■□□□□ 0
KPNA4-201ENST00000334256 FERMT2Q96AC1 680 aa15.05■□□□□ -0
KPNA4-201ENST00000334256 RUFY2Q8WXA3 655 aa15.05■□□□□ -0
KPNA4-201ENST00000334256 LEKR1Q6ZMV7 388 aa15.05■□□□□ -0
KPNA4-201ENST00000334256 SPC24Q8NBT2 197 aa15.05■□□□□ -0
KPNA4-201ENST00000334256 STK24Q9Y6E0 443 aa15.05■□□□□ -0
KPNA4-201ENST00000334256 CLIP1P30622 1438 aa15.04■□□□□ -0
KPNA4-201ENST00000334256 UBA5Q9GZZ9 404 aa15.04■□□□□ -0
KPNA4-201ENST00000334256 TXLNAP40222 546 aa15.04■□□□□ -0
KPNA4-201ENST00000334256 OLFM4Q6UX06 510 aa15.04■□□□□ -0
KPNA4-201ENST00000334256 ABCF2Q9UG63 623 aa15.04■□□□□ -0
KPNA4-201ENST00000334256 IPO4Q8TEX9 1081 aaKnown RBP15.04■□□□□ -0
KPNA4-201ENST00000334256 CAPN15O75808 1086 aa15.04■□□□□ -0
KPNA4-201ENST00000334256 SMC1AQ14683 1233 aaKnown RBP15.04■□□□□ -0
KPNA4-201ENST00000334256 SMC2O95347 1197 aa15.04■□□□□ -0
KPNA4-201ENST00000334256 GPR162Q16538 588 aa15.03■□□□□ -0
KPNA4-201ENST00000334256 PROCA1Q8NCQ7 364 aaPredicted RBP15.03■□□□□ -0
KPNA4-201ENST00000334256 TNIP1Q15025 636 aa15.03■□□□□ -0
KPNA4-201ENST00000334256 DPH6Q7L8W6 267 aa15.03■□□□□ -0
KPNA4-201ENST00000334256 PKD2Q13563 968 aa15.03■□□□□ -0
KPNA4-201ENST00000334256 RPGRQ92834 1020 aaKnown RBP15.03■□□□□ -0
KPNA4-201ENST00000334256 DEF6Q9H4E7 631 aa15.03■□□□□ -0
KPNA4-201ENST00000334256 CWC15Q9P013 229 aaKnown RBP15.03■□□□□ -0
KPNA4-201ENST00000334256 PKNOX2Q96KN3 472 aa15.03■□□□□ -0
KPNA4-201ENST00000334256 RALBP1Q15311 655 aa15.03■□□□□ -0
KPNA4-201ENST00000334256 ZBTB24O43167 697 aaPredicted RBP15.02■□□□□ -0
KPNA4-201ENST00000334256 NLRP6P59044 892 aa15.02■□□□□ -0
KPNA4-201ENST00000334256 MACROD2A1Z1Q3 448 aa15.02■□□□□ -0
KPNA4-201ENST00000334256 ZWINTO95229 277 aa15.02■□□□□ -0
KPNA4-201ENST00000334256 DZIP1Q86YF9 867 aaKnown RBP15.02■□□□□ -0
KPNA4-201ENST00000334256 OTUD6BQ8N6M0 293 aa15.02■□□□□ -0
KPNA4-201ENST00000334256 CCDC113Q9H0I3 377 aa15.02■□□□□ -0
KPNA4-201ENST00000334256 PUF60Q9UHX1 559 aaKnown RBP15.02■□□□□ -0
KPNA4-201ENST00000334256 DHX8Q14562 1220 aaKnown RBP15.02■□□□□ -0
KPNA4-201ENST00000334256 C6orf229H3BNL8 230 aa15.02□□□□□ -0.01
KPNA4-201ENST00000334256 CKAP2LQ8IYA6 745 aa15.02□□□□□ -0.01
KPNA4-201ENST00000334256 SKIV2LQ15477 1246 aaKnown RBP15.02□□□□□ -0.01
KPNA4-201ENST00000334256 KIAA0754O94854 1291 aa15.01□□□□□ -0.01
KPNA4-201ENST00000334256 SIL1Q9H173 461 aa15.01□□□□□ -0.01
KPNA4-201ENST00000334256 POLR3DP05423 398 aaPredicted RBP15.01□□□□□ -0.01
KPNA4-201ENST00000334256 GJA3Q9Y6H8 435 aa15.01□□□□□ -0.01
KPNA4-201ENST00000334256 ATP2C2O75185 946 aa15.01□□□□□ -0.01
KPNA4-201ENST00000334256 FLIIQ13045 1269 aa15.01□□□□□ -0.01
KPNA4-201ENST00000334256 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
KPNA4-201ENST00000334256 EFCAB2Q5VUJ9 269 aa15.01□□□□□ -0.01
KPNA4-201ENST00000334256 TMCO5BA8MYB1 307 aa15□□□□□ -0.01
KPNA4-201ENST00000334256 FKBP4Q02790 459 aaKnown RBP eCLIP15□□□□□ -0.01
KPNA4-201ENST00000334256 RAI14Q9P0K7 980 aa15□□□□□ -0.01
KPNA4-201ENST00000334256 SAMM50Q9Y512 469 aa15□□□□□ -0.01
KPNA4-201ENST00000334256 CCDC96Q2M329 555 aa15□□□□□ -0.01
KPNA4-201ENST00000334256 TRIM22Q8IYM9 498 aa15□□□□□ -0.01
KPNA4-201ENST00000334256 GTF3C6Q969F1 213 aa15□□□□□ -0.01
KPNA4-201ENST00000334256 NFKBIBQ15653 356 aa15□□□□□ -0.01
KPNA4-201ENST00000334256 DZIP1LQ8IYY4 767 aaKnown RBP15□□□□□ -0.01
KPNA4-201ENST00000334256 UBE4AQ14139 1066 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms