RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 DHX37Q8IY37 1157 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-201ENST00000334218 NBPF1Q3BBV0 1214 aa7.19□□□□□ -1.26
CDC42BPA-201ENST00000334218 ALS2CR12Q96Q35 445 aa7.19□□□□□ -1.26
CDC42BPA-201ENST00000334218 ZNF853P0CG23 659 aa7.19□□□□□ -1.26
CDC42BPA-201ENST00000334218 NBPF6Q5VWK0 638 aa7.19□□□□□ -1.26
CDC42BPA-201ENST00000334218 NBPF5PQ86XG9 351 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-201ENST00000334218 NBPF4Q96M43 638 aa7.19□□□□□ -1.26
CDC42BPA-201ENST00000334218 MAPK8IP3Q9UPT6 1336 aa7.19□□□□□ -1.26
CDC42BPA-201ENST00000334218 MROH2BQ7Z745 1585 aa7.19□□□□□ -1.26
CDC42BPA-201ENST00000334218 GOLGA2Q08379 1002 aa7.19□□□□□ -1.26
CDC42BPA-201ENST00000334218 TTC19Q6DKK2 380 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-201ENST00000334218 LTV1Q96GA3 475 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-201ENST00000334218 ZHX3Q9H4I2 956 aa7.19□□□□□ -1.26
CDC42BPA-201ENST00000334218 ARMC9Q7Z3E5 817 aa7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 TUBB4BP68371 445 aa7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 TRDNQ13061 729 aa7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 RAI14Q9P0K7 980 aa7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 CARMIL1Q5VZK9 1371 aa7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 TSPYL2Q9H2G4 693 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 NLRP5P59047 1200 aa7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 GNL2Q13823 731 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 RPAP2Q8IXW5 612 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 JPH4Q96JJ6 628 aa7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 A6NNZ2 444 aa7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 TUBB8Q3ZCM7 444 aa7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 SMAP1Q8IYB5 467 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 FERP16591 822 aa7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 ZBTB12Q9Y330 459 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 CUX2O14529 1486 aa7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 RTF1Q92541 710 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 CEP83Q9Y592 693 aa7.18□□□□□ -1.26
CDC42BPA-201ENST00000334218 DESP17661 470 aa7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 NAA16Q6N069 864 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 ZBTB41Q5SVQ8 909 aa7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 RPUSD2Q8IZ73 545 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 ZCRB1Q8TBF4 217 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 SRRTQ9BXP5 876 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 SLKQ9H2G2 1235 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 GIMAP4Q9NUV9 329 aa7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 DYNC1I1O14576 645 aa7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 MAPK8IP2Q13387 824 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 SF3A1Q15459 793 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 CCDC63Q8NA47 563 aa7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 SPATS2LQ9NUQ6 558 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 SUPT16HQ9Y5B9 1047 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 TOP2AP11388 1531 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 DNAJC8O75937 253 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 CAMK4Q16566 473 aa7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 TACC1O75410 805 aa7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 UBE4AQ14139 1066 aa7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 PIBF1Q8WXW3 757 aa7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 CEP63Q96MT8 703 aa7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 APBB1O00213 710 aa7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 ERCC3P19447 782 aa7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 UBA5Q9GZZ9 404 aa7.17□□□□□ -1.26
CDC42BPA-201ENST00000334218 ODF2Q5BJF6 829 aa7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 SMARCA4P51532 1647 aa7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 ZNF365Q70YC5 407 aa7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 WHAMMQ8TF30 809 aa7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 STMN2Q93045 179 aa7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 STAMBPO95630 424 aa7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 ANAPC4Q9UJX5 808 aa7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 POTEB3A0JP26 581 aa7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 PEX19P40855 299 aa7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 CYB5RLQ6IPT4 315 aa7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 POTEBQ6S5H4 581 aa7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 GBP6Q6ZN66 633 aa7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 TTC31Q49AM3 519 aaPredicted RBP7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 CCDC158Q5M9N0 1113 aa7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 MORC4Q8TE76 937 aa7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 RUFY3Q7L099 469 aa7.16□□□□□ -1.26
CDC42BPA-201ENST00000334218 EPS15P42566 896 aa7.15□□□□□ -1.26
CDC42BPA-201ENST00000334218 CEBPZQ03701 1054 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-201ENST00000334218 TSPY2A6NKD2 308 aa7.15□□□□□ -1.26
CDC42BPA-201ENST00000334218 ERC2O15083 957 aa7.15□□□□□ -1.26
CDC42BPA-201ENST00000334218 TSPY3P0CV98 308 aa7.15□□□□□ -1.26
CDC42BPA-201ENST00000334218 TSPY8P0CW00 308 aa7.15□□□□□ -1.26
CDC42BPA-201ENST00000334218 TSPY1Q01534 308 aa7.15□□□□□ -1.26
CDC42BPA-201ENST00000334218 VCX3BQ9H321 246 aa7.15□□□□□ -1.26
CDC42BPA-201ENST00000334218 NOL3O60936 208 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-201ENST00000334218 MFAP1P55081 439 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-201ENST00000334218 TBC1D10BQ4KMP7 808 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-201ENST00000334218 NUP133Q8WUM0 1156 aa7.15□□□□□ -1.26
CDC42BPA-201ENST00000334218 ARID3CA6NKF2 412 aa7.15□□□□□ -1.27
CDC42BPA-201ENST00000334218 ATP6V1E1P36543 226 aa7.15□□□□□ -1.27
CDC42BPA-201ENST00000334218 CCDC112Q8NEF3 446 aa7.15□□□□□ -1.27
CDC42BPA-201ENST00000334218 FAM210AQ96ND0 272 aa7.15□□□□□ -1.27
CDC42BPA-201ENST00000334218 ANLNQ9NQW6 1124 aa7.15□□□□□ -1.27
CDC42BPA-201ENST00000334218 CEP128Q6ZU80 1094 aa7.15□□□□□ -1.27
CDC42BPA-201ENST00000334218 CACTINQ8WUQ7 758 aaKnown RBP7.15□□□□□ -1.27
CDC42BPA-201ENST00000334218 CCDC113Q9H0I3 377 aa7.15□□□□□ -1.27
CDC42BPA-201ENST00000334218 CCDC88BA6NC98 1476 aa7.15□□□□□ -1.27
CDC42BPA-201ENST00000334218 CLIP1P30622 1438 aa7.15□□□□□ -1.27
CDC42BPA-201ENST00000334218 KIF5BP33176 963 aa7.15□□□□□ -1.27
CDC42BPA-201ENST00000334218 ANGPT1Q15389 498 aa7.15□□□□□ -1.27
CDC42BPA-201ENST00000334218 WHAMMP3Q1A5X7 153 aa7.15□□□□□ -1.27
CDC42BPA-201ENST00000334218 HOOK1Q9UJC3 728 aaKnown RBP7.15□□□□□ -1.27
CDC42BPA-201ENST00000334218 RSPH3Q86UC2 560 aa7.15□□□□□ -1.27
CDC42BPA-201ENST00000334218 SPAG9O60271 1321 aaKnown RBP7.14□□□□□ -1.27
CDC42BPA-201ENST00000334218 CCDC172P0C7W6 258 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms