RNA–Protein interactions for RNA: ENST00000333535.8

SCN5A-202, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SCN5A, Length 8,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-202ENST00000333535 DACH1Q9UI36 760 aa14.05□□□□□ -0.16
SCN5A-202ENST00000333535 TBC1D2BQ9UPU7 963 aa14.05□□□□□ -0.16
SCN5A-202ENST00000333535 UBTFL1P0CB47 393 aaPredicted RBP14.05□□□□□ -0.16
SCN5A-202ENST00000333535 FGD6Q6ZV73 1430 aa14.05□□□□□ -0.16
SCN5A-202ENST00000333535 EIF3JO75822 258 aaKnown RBP14.05□□□□□ -0.16
SCN5A-202ENST00000333535 ANKRD18AQ8IVF6 992 aa14.05□□□□□ -0.16
SCN5A-202ENST00000333535 ZNHIT6Q9NWK9 470 aaKnown RBP14.05□□□□□ -0.16
SCN5A-202ENST00000333535 PDILTQ8N807 584 aa14.05□□□□□ -0.16
SCN5A-202ENST00000333535 CT47B1P0C2W7 299 aaPredicted RBP14.04□□□□□ -0.16
SCN5A-202ENST00000333535 CCDC30Q5VVM6 783 aa14.04□□□□□ -0.16
SCN5A-202ENST00000333535 SYTL4Q96C24 671 aaPredicted RBP14.04□□□□□ -0.16
SCN5A-202ENST00000333535 LRRC9Q6ZRR7 1453 aa14.04□□□□□ -0.16
SCN5A-202ENST00000333535 KIF6Q6ZMV9 814 aa14.04□□□□□ -0.16
SCN5A-202ENST00000333535 CCDC192P0DO97 292 aa14.04□□□□□ -0.16
SCN5A-202ENST00000333535 AEBP1Q8IUX7 1158 aa14.04□□□□□ -0.16
SCN5A-202ENST00000333535 HMGB2P26583 209 aaKnown RBP14.03□□□□□ -0.16
SCN5A-202ENST00000333535 USP8P40818 1118 aa14.03□□□□□ -0.16
SCN5A-202ENST00000333535 STIM1Q13586 685 aa14.03□□□□□ -0.16
SCN5A-202ENST00000333535 FGD5Q6ZNL6 1462 aa14.03□□□□□ -0.16
SCN5A-202ENST00000333535 PLEKHH2Q8IVE3 1493 aa14.03□□□□□ -0.16
SCN5A-202ENST00000333535 GNAI3P08754 354 aa14.02□□□□□ -0.16
SCN5A-202ENST00000333535 CLASRPQ8N2M8 674 aaKnown RBP14.02□□□□□ -0.16
SCN5A-202ENST00000333535 KIAA0754O94854 1291 aa14.02□□□□□ -0.16
SCN5A-202ENST00000333535 GCC1Q96CN9 775 aa14.02□□□□□ -0.16
SCN5A-202ENST00000333535 LNPKQ9C0E8 428 aa14.02□□□□□ -0.16
SCN5A-202ENST00000333535 SYCP1Q15431 976 aa14.02□□□□□ -0.17
SCN5A-202ENST00000333535 FBXW7Q969H0 707 aa14.02□□□□□ -0.17
SCN5A-202ENST00000333535 CUL7Q14999 1698 aa14.01□□□□□ -0.17
SCN5A-202ENST00000333535 GAS2L2Q8NHY3 880 aa14.01□□□□□ -0.17
SCN5A-202ENST00000333535 CDK5RAP3Q96JB5 506 aa14.01□□□□□ -0.17
SCN5A-202ENST00000333535 SMC2O95347 1197 aa14.01□□□□□ -0.17
SCN5A-202ENST00000333535 GPRASP1Q5JY77 1395 aa14.01□□□□□ -0.17
SCN5A-202ENST00000333535 ERLIN1O75477 346 aa14□□□□□ -0.17
SCN5A-202ENST00000333535 PDE3AQ14432 1141 aa14□□□□□ -0.17
SCN5A-202ENST00000333535 SYNJ2O15056 1496 aa14□□□□□ -0.17
SCN5A-202ENST00000333535 CCAR1Q8IX12 1150 aaKnown RBP14□□□□□ -0.17
SCN5A-202ENST00000333535 INCENPQ9NQS7 918 aa14□□□□□ -0.17
SCN5A-202ENST00000333535 CCDC27Q2M243 656 aa14□□□□□ -0.17
SCN5A-202ENST00000333535 WASHC4Q2M389 1173 aa14□□□□□ -0.17
SCN5A-202ENST00000333535 DDX24Q9GZR7 859 aaKnown RBP eCLIP14□□□□□ -0.17
SCN5A-202ENST00000333535 CBFA2T2O43439 604 aa14□□□□□ -0.17
SCN5A-202ENST00000333535 ZFYVE27Q5T4F4 411 aa13.99□□□□□ -0.17
SCN5A-202ENST00000333535 SRCIN1Q9C0H9 1055 aa13.99□□□□□ -0.17
SCN5A-202ENST00000333535 GNL3LQ9NVN8 582 aaKnown RBP13.99□□□□□ -0.17
SCN5A-202ENST00000333535 WDR33Q9C0J8 1336 aaKnown RBP13.99□□□□□ -0.17
SCN5A-202ENST00000333535 SEPT7Q16181 437 aaKnown RBP13.98□□□□□ -0.17
SCN5A-202ENST00000333535 AXDND1Q5T1B0 1012 aaPredicted RBP13.98□□□□□ -0.17
SCN5A-202ENST00000333535 NEUROD6Q96NK8 337 aa13.98□□□□□ -0.17
SCN5A-202ENST00000333535 CASKIN1Q8WXD9 1431 aa13.97□□□□□ -0.17
SCN5A-202ENST00000333535 NECTIN2Q92692 538 aa13.97□□□□□ -0.17
SCN5A-202ENST00000333535 RRP9O43818 475 aaKnown RBP13.97□□□□□ -0.17
SCN5A-202ENST00000333535 CFAP45Q9UL16 551 aa13.97□□□□□ -0.17
SCN5A-202ENST00000333535 PDCL2Q8N4E4 241 aa13.97□□□□□ -0.17
SCN5A-202ENST00000333535 PPFIBP1Q86W92 1011 aa13.97□□□□□ -0.17
SCN5A-202ENST00000333535 ANKRD50Q9ULJ7 1429 aa13.96□□□□□ -0.17
SCN5A-202ENST00000333535 PKNOX2Q96KN3 472 aa13.96□□□□□ -0.17
SCN5A-202ENST00000333535 IKQ13123 557 aaPredicted RBP13.96□□□□□ -0.17
SCN5A-202ENST00000333535 TSPYL1Q9H0U9 437 aa13.96□□□□□ -0.17
SCN5A-202ENST00000333535 DCAF8L1A6NGE4 600 aa13.96□□□□□ -0.18
SCN5A-202ENST00000333535 GNAI2P04899 355 aa13.96□□□□□ -0.18
SCN5A-202ENST00000333535 CIZ1Q9ULV3 898 aaPredicted RBP13.95□□□□□ -0.18
SCN5A-202ENST00000333535 KIF2AO00139 706 aaPredicted RBP13.95□□□□□ -0.18
SCN5A-202ENST00000333535 HFM1A2PYH4 1435 aa13.95□□□□□ -0.18
SCN5A-202ENST00000333535 POLA1P09884 1462 aaPredicted RBP13.95□□□□□ -0.18
SCN5A-202ENST00000333535 CDKL5O76039 1030 aa13.94□□□□□ -0.18
SCN5A-202ENST00000333535 KRT85P78386 507 aa13.94□□□□□ -0.18
SCN5A-202ENST00000333535 GBP2P32456 591 aaPredicted RBP13.94□□□□□ -0.18
SCN5A-202ENST00000333535 FSD1Q9BTV5 496 aa13.94□□□□□ -0.18
SCN5A-202ENST00000333535 TNMDQ9H2S6 317 aa13.94□□□□□ -0.18
SCN5A-202ENST00000333535 OSCARQ8IYS5 282 aa13.94□□□□□ -0.18
SCN5A-202ENST00000333535 DESP17661 470 aa13.94□□□□□ -0.18
SCN5A-202ENST00000333535 CCT4P50991 539 aaKnown RBP13.94□□□□□ -0.18
SCN5A-202ENST00000333535 ITSN2Q9NZM3 1697 aa13.94□□□□□ -0.18
SCN5A-202ENST00000333535 MCM3P25205 808 aa13.94□□□□□ -0.18
SCN5A-202ENST00000333535 ZSCAN25Q6NSZ9 544 aa13.94□□□□□ -0.18
SCN5A-202ENST00000333535 SERPINC1P01008 464 aa13.93□□□□□ -0.18
SCN5A-202ENST00000333535 NEK4P51957 841 aa13.93□□□□□ -0.18
SCN5A-202ENST00000333535 TRIM22Q8IYM9 498 aa13.93□□□□□ -0.18
SCN5A-202ENST00000333535 PLEKHO1Q53GL0 409 aaPredicted RBP13.93□□□□□ -0.18
SCN5A-202ENST00000333535 CCDC181Q5TID7 509 aa13.93□□□□□ -0.18
SCN5A-202ENST00000333535 CCDC112Q8NEF3 446 aa13.93□□□□□ -0.18
SCN5A-202ENST00000333535 CCDC158Q5M9N0 1113 aa13.93□□□□□ -0.18
SCN5A-202ENST00000333535 CYP46A1Q9Y6A2 500 aa13.93□□□□□ -0.18
SCN5A-202ENST00000333535 NCOA2Q15596 1464 aa13.93□□□□□ -0.18
SCN5A-202ENST00000333535 SETD1BQ9UPS6 1966 aaKnown RBP13.93□□□□□ -0.18
SCN5A-202ENST00000333535 EZRP15311 586 aaKnown RBP13.93□□□□□ -0.18
SCN5A-202ENST00000333535 PANK1Q8TE04 598 aa13.93□□□□□ -0.18
SCN5A-202ENST00000333535 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.93□□□□□ -0.18
SCN5A-202ENST00000333535 TRIM21P19474 475 aaKnown RBP13.93□□□□□ -0.18
SCN5A-202ENST00000333535 NEFHP12036 1026 aa13.92□□□□□ -0.18
SCN5A-202ENST00000333535 NACAP1Q9BZK3 213 aa13.92□□□□□ -0.18
SCN5A-202ENST00000333535 KIF14Q15058 1648 aa13.92□□□□□ -0.18
SCN5A-202ENST00000333535 K7ELQ4 463 aaPredicted RBP13.92□□□□□ -0.18
SCN5A-202ENST00000333535 TOP2BQ02880 1626 aa13.92□□□□□ -0.18
SCN5A-202ENST00000333535 STK38Q15208 465 aa13.92□□□□□ -0.18
SCN5A-202ENST00000333535 TMEM132AQ24JP5 1023 aa13.92□□□□□ -0.18
SCN5A-202ENST00000333535 HMOX1P09601 288 aa13.91□□□□□ -0.18
SCN5A-202ENST00000333535 PNISRQ8TF01 805 aaKnown RBP13.91□□□□□ -0.18
SCN5A-202ENST00000333535 PRPF40AO75400 957 aaKnown RBP13.91□□□□□ -0.18
SCN5A-202ENST00000333535 DEF6Q9H4E7 631 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms