RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 CARD14Q9BXL6 1004 aa13.13□□□□□ -0.31
PRAMEF1-201ENST00000332296 LAS1LQ9Y4W2 734 aaKnown RBP13.13□□□□□ -0.31
PRAMEF1-201ENST00000332296 TRAK1Q9UPV9 953 aa13.13□□□□□ -0.31
PRAMEF1-201ENST00000332296 APAF1O14727 1248 aa13.12□□□□□ -0.31
PRAMEF1-201ENST00000332296 RTL5Q5HYW3 569 aaPredicted RBP13.12□□□□□ -0.31
PRAMEF1-201ENST00000332296 SLC26A8Q96RN1 970 aa13.12□□□□□ -0.31
PRAMEF1-201ENST00000332296 STK26Q9P289 416 aa13.12□□□□□ -0.31
PRAMEF1-201ENST00000332296 SHPRHQ149N8 1683 aa13.12□□□□□ -0.31
PRAMEF1-201ENST00000332296 TRMT2AQ8IZ69 625 aaKnown RBP13.11□□□□□ -0.31
PRAMEF1-201ENST00000332296 NKTRP30414 1462 aaKnown RBP13.11□□□□□ -0.31
PRAMEF1-201ENST00000332296 HSPA2P54652 639 aa13.11□□□□□ -0.31
PRAMEF1-201ENST00000332296 ADAMTS13Q76LX8 1427 aa13.11□□□□□ -0.31
PRAMEF1-201ENST00000332296 METP08581 1390 aa13.11□□□□□ -0.31
PRAMEF1-201ENST00000332296 QRICH2Q9H0J4 1663 aa13.11□□□□□ -0.31
PRAMEF1-201ENST00000332296 CENPQQ7L2Z9 268 aaPredicted RBP13.1□□□□□ -0.31
PRAMEF1-201ENST00000332296 LMTK3Q96Q04 1460 aa13.09□□□□□ -0.31
PRAMEF1-201ENST00000332296 NCKAP5LQ9HCH0 1330 aa13.09□□□□□ -0.31
PRAMEF1-201ENST00000332296 YTHDC2Q9H6S0 1430 aaKnown RBP13.09□□□□□ -0.31
PRAMEF1-201ENST00000332296 ARHGEF28Q8N1W1 1705 aaKnown RBP13.09□□□□□ -0.31
PRAMEF1-201ENST00000332296 BCAR3O75815 825 aa13.08□□□□□ -0.31
PRAMEF1-201ENST00000332296 BRPF1P55201 1214 aaPredicted RBP13.08□□□□□ -0.31
PRAMEF1-201ENST00000332296 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.07□□□□□ -0.32
PRAMEF1-201ENST00000332296 MED14O60244 1454 aa13.07□□□□□ -0.32
PRAMEF1-201ENST00000332296 SBNO2Q9Y2G9 1366 aa13.07□□□□□ -0.32
PRAMEF1-201ENST00000332296 NSD3Q9BZ95 1437 aa13.07□□□□□ -0.32
PRAMEF1-201ENST00000332296 C8orf34Q49A92 452 aa13.06□□□□□ -0.32
PRAMEF1-201ENST00000332296 VIRMAQ69YN4 1812 aaKnown RBP13.06□□□□□ -0.32
PRAMEF1-201ENST00000332296 NPHP4O75161 1426 aaPredicted RBP13.05□□□□□ -0.32
PRAMEF1-201ENST00000332296 SAFB2Q14151 953 aaKnown RBP eCLIP13.05□□□□□ -0.32
PRAMEF1-201ENST00000332296 TBX22Q9Y458 520 aa13.05□□□□□ -0.32
PRAMEF1-201ENST00000332296 CENPJQ9HC77 1338 aaPredicted RBP13.05□□□□□ -0.32
PRAMEF1-201ENST00000332296 DIP2AQ14689 1571 aa13.05□□□□□ -0.32
PRAMEF1-201ENST00000332296 NEFMP07197 916 aa13.05□□□□□ -0.32
PRAMEF1-201ENST00000332296 POLR3AO14802 1390 aaPredicted RBP13.05□□□□□ -0.32
PRAMEF1-201ENST00000332296 E9PSI1 815 aa13.04□□□□□ -0.32
PRAMEF1-201ENST00000332296 RGS3P49796 1198 aa13.04□□□□□ -0.32
PRAMEF1-201ENST00000332296 PRAM1Q96QH2 718 aa13.04□□□□□ -0.32
PRAMEF1-201ENST00000332296 IQSEC2Q5JU85 1478 aa13.03□□□□□ -0.32
PRAMEF1-201ENST00000332296 SLC4A3P48751 1232 aa13.03□□□□□ -0.32
PRAMEF1-201ENST00000332296 FAM161AQ3B820 660 aa13.03□□□□□ -0.32
PRAMEF1-201ENST00000332296 DDRGK1Q96HY6 314 aa13.03□□□□□ -0.32
PRAMEF1-201ENST00000332296 POGKQ9P215 609 aa13.03□□□□□ -0.32
PRAMEF1-201ENST00000332296 PTPRUQ92729 1446 aa13.03□□□□□ -0.32
PRAMEF1-201ENST00000332296 WAPLQ7Z5K2 1190 aa13.03□□□□□ -0.32
PRAMEF1-201ENST00000332296 KNDC1Q76NI1 1749 aa13.02□□□□□ -0.32
PRAMEF1-201ENST00000332296 ABCC11Q96J66 1382 aa13.02□□□□□ -0.32
PRAMEF1-201ENST00000332296 STRCQ7RTU9 1775 aa13.02□□□□□ -0.32
PRAMEF1-201ENST00000332296 USP32Q8NFA0 1604 aa13.02□□□□□ -0.32
PRAMEF1-201ENST00000332296 TNNT2P45379 298 aaPredicted RBP13.02□□□□□ -0.33
PRAMEF1-201ENST00000332296 AMOTL2Q9Y2J4 779 aa13.02□□□□□ -0.33
PRAMEF1-201ENST00000332296 U3KPZ7 1027 aaPredicted RBP13.02□□□□□ -0.33
PRAMEF1-201ENST00000332296 WWC1Q8IX03 1113 aa13.01□□□□□ -0.33
PRAMEF1-201ENST00000332296 SLC12A5Q9H2X9 1139 aa13.01□□□□□ -0.33
PRAMEF1-201ENST00000332296 CHD2O14647 1828 aaKnown RBP13.01□□□□□ -0.33
PRAMEF1-201ENST00000332296 DLC1Q96QB1 1528 aa13.01□□□□□ -0.33
PRAMEF1-201ENST00000332296 IGHDP01880 384 aa13□□□□□ -0.33
PRAMEF1-201ENST00000332296 RRP7AQ9Y3A4 280 aaKnown RBP13□□□□□ -0.33
PRAMEF1-201ENST00000332296 ROBO2Q9HCK4 1378 aa13□□□□□ -0.33
PRAMEF1-201ENST00000332296 MINK1Q8N4C8 1332 aaPredicted RBP13□□□□□ -0.33
PRAMEF1-201ENST00000332296 CPS1P31327 1500 aa12.99□□□□□ -0.33
PRAMEF1-201ENST00000332296 TULP4Q9NRJ4 1543 aa12.99□□□□□ -0.33
PRAMEF1-201ENST00000332296 TECPR2O15040 1411 aa12.99□□□□□ -0.33
PRAMEF1-201ENST00000332296 PPM1GO15355 546 aaPredicted RBP12.99□□□□□ -0.33
PRAMEF1-201ENST00000332296 MORC1Q86VD1 984 aa12.99□□□□□ -0.33
PRAMEF1-201ENST00000332296 NEUROD2Q15784 382 aa12.98□□□□□ -0.33
PRAMEF1-201ENST00000332296 PANK1Q8TE04 598 aa12.98□□□□□ -0.33
PRAMEF1-201ENST00000332296 XRN1Q8IZH2 1706 aaKnown RBP12.98□□□□□ -0.33
PRAMEF1-201ENST00000332296 PIK3R4Q99570 1358 aa12.98□□□□□ -0.33
PRAMEF1-201ENST00000332296 KCNA6P17658 529 aa12.98□□□□□ -0.33
PRAMEF1-201ENST00000332296 USP35Q9P2H5 1018 aa12.97□□□□□ -0.33
PRAMEF1-201ENST00000332296 COG6Q9Y2V7 657 aa12.97□□□□□ -0.33
PRAMEF1-201ENST00000332296 NGEFQ8N5V2 710 aa12.97□□□□□ -0.33
PRAMEF1-201ENST00000332296 FAM135BQ49AJ0 1406 aa12.97□□□□□ -0.33
PRAMEF1-201ENST00000332296 CGNL1Q0VF96 1302 aa12.96□□□□□ -0.33
PRAMEF1-201ENST00000332296 SIRT1Q96EB6 747 aa12.96□□□□□ -0.33
PRAMEF1-201ENST00000332296 TNNQ9UQP3 1299 aa12.96□□□□□ -0.33
PRAMEF1-201ENST00000332296 CANXP27824 592 aaKnown RBP12.96□□□□□ -0.34
PRAMEF1-201ENST00000332296 PDE3AQ14432 1141 aa12.96□□□□□ -0.34
PRAMEF1-201ENST00000332296 TCP11L2Q8N4U5 519 aa12.96□□□□□ -0.34
PRAMEF1-201ENST00000332296 CLUAP1Q96AJ1 413 aa12.96□□□□□ -0.34
PRAMEF1-201ENST00000332296 RUNDC1Q96C34 613 aa12.96□□□□□ -0.34
PRAMEF1-201ENST00000332296 NINLQ9Y2I6 1382 aa12.95□□□□□ -0.34
PRAMEF1-201ENST00000332296 EVC2Q86UK5 1308 aa12.95□□□□□ -0.34
PRAMEF1-201ENST00000332296 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.95□□□□□ -0.34
PRAMEF1-201ENST00000332296 PTCH1Q13635 1447 aa12.94□□□□□ -0.34
PRAMEF1-201ENST00000332296 FRAT1Q92837 279 aaPredicted RBP12.94□□□□□ -0.34
PRAMEF1-201ENST00000332296 MTHFSP49914 203 aa12.94□□□□□ -0.34
PRAMEF1-201ENST00000332296 NFKBIBQ15653 356 aa12.94□□□□□ -0.34
PRAMEF1-201ENST00000332296 HS6ST3Q8IZP7 471 aa12.94□□□□□ -0.34
PRAMEF1-201ENST00000332296 RBM33Q96EV2 1170 aaKnown RBP12.94□□□□□ -0.34
PRAMEF1-201ENST00000332296 CABP2Q9NPB3 220 aa12.94□□□□□ -0.34
PRAMEF1-201ENST00000332296 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
PRAMEF1-201ENST00000332296 RLBP1P12271 317 aa12.93□□□□□ -0.34
PRAMEF1-201ENST00000332296 RARSP54136 660 aaKnown RBP12.93□□□□□ -0.34
PRAMEF1-201ENST00000332296 SRPK2P78362 688 aaKnown RBP12.93□□□□□ -0.34
PRAMEF1-201ENST00000332296 BCL2L13Q9BXK5 485 aa12.93□□□□□ -0.34
PRAMEF1-201ENST00000332296 USP19O94966 1318 aa12.93□□□□□ -0.34
PRAMEF1-201ENST00000332296 STRCP1A6NGW2 1772 aa12.93□□□□□ -0.34
PRAMEF1-201ENST00000332296 NKX1-1Q15270 411 aaPredicted RBP12.92□□□□□ -0.34
PRAMEF1-201ENST00000332296 CDK19Q9BWU1 502 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms