RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 IL27Q8NEV9 243 aa11.37□□□□□ -0.59
CPNE8-201ENST00000331366 CLUAP1Q96AJ1 413 aa11.37□□□□□ -0.59
CPNE8-201ENST00000331366 A0A1W2PP64 1363 aa11.37□□□□□ -0.59
CPNE8-201ENST00000331366 EDC4Q6P2E9 1401 aaKnown RBP11.37□□□□□ -0.59
CPNE8-201ENST00000331366 CC2D1BQ5T0F9 858 aaKnown RBP11.37□□□□□ -0.59
CPNE8-201ENST00000331366 EIF5BO60841 1220 aaKnown RBP11.37□□□□□ -0.59
CPNE8-201ENST00000331366 EVC2Q86UK5 1308 aa11.37□□□□□ -0.59
CPNE8-201ENST00000331366 IBTKQ9P2D0 1353 aaPredicted RBP11.36□□□□□ -0.59
CPNE8-201ENST00000331366 ALDH1L2Q3SY69 923 aa11.36□□□□□ -0.59
CPNE8-201ENST00000331366 ABCC6O95255 1503 aa11.36□□□□□ -0.59
CPNE8-201ENST00000331366 ZNF142P52746 1687 aaPredicted RBP11.36□□□□□ -0.59
CPNE8-201ENST00000331366 CLEC17AQ6ZS10 378 aa11.36□□□□□ -0.59
CPNE8-201ENST00000331366 IL17RAQ96F46 866 aa11.36□□□□□ -0.59
CPNE8-201ENST00000331366 CFAP70Q5T0N1 1121 aa11.35□□□□□ -0.59
CPNE8-201ENST00000331366 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.35□□□□□ -0.59
CPNE8-201ENST00000331366 SSH2Q76I76 1423 aa11.35□□□□□ -0.59
CPNE8-201ENST00000331366 ARHGAP45Q92619 1136 aa11.35□□□□□ -0.59
CPNE8-201ENST00000331366 TBC1D32Q96NH3 1257 aa11.35□□□□□ -0.59
CPNE8-201ENST00000331366 ISY1Q9ULR0 285 aaKnown RBP11.35□□□□□ -0.59
CPNE8-201ENST00000331366 ARHGAP23Q9P227 1491 aa11.34□□□□□ -0.59
CPNE8-201ENST00000331366 VGFO15240 615 aaPredicted RBP11.34□□□□□ -0.59
CPNE8-201ENST00000331366 KDM3BQ7LBC6 1761 aa11.34□□□□□ -0.59
CPNE8-201ENST00000331366 SMC5Q8IY18 1101 aa11.33□□□□□ -0.6
CPNE8-201ENST00000331366 KLHL34Q8N239 644 aa11.33□□□□□ -0.6
CPNE8-201ENST00000331366 RGL3Q3MIN7 710 aa11.33□□□□□ -0.6
CPNE8-201ENST00000331366 PIK3C2AO00443 1686 aa11.33□□□□□ -0.6
CPNE8-201ENST00000331366 SIPA1L3O60292 1781 aaPredicted RBP11.32□□□□□ -0.6
CPNE8-201ENST00000331366 CHD2O14647 1828 aaKnown RBP11.32□□□□□ -0.6
CPNE8-201ENST00000331366 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
CPNE8-201ENST00000331366 RTL1A6NKG5 1358 aa11.32□□□□□ -0.6
CPNE8-201ENST00000331366 LMO7Q8WWI1 1683 aa11.32□□□□□ -0.6
CPNE8-201ENST00000331366 KIF3BO15066 747 aa11.32□□□□□ -0.6
CPNE8-201ENST00000331366 SNX21Q969T3 373 aa11.32□□□□□ -0.6
CPNE8-201ENST00000331366 MYH16Q9H6N6 1097 aa11.32□□□□□ -0.6
CPNE8-201ENST00000331366 DMRT2Q9Y5R5 561 aa11.31□□□□□ -0.6
CPNE8-201ENST00000331366 ARHGEF10O15013 1369 aa11.31□□□□□ -0.6
CPNE8-201ENST00000331366 CEP170BQ9Y4F5 1589 aaPredicted RBP11.3□□□□□ -0.6
CPNE8-201ENST00000331366 IGHDP01880 384 aa11.3□□□□□ -0.6
CPNE8-201ENST00000331366 RBM25P49756 843 aaKnown RBP11.3□□□□□ -0.6
CPNE8-201ENST00000331366 OVOS2A0A0J9YW53 1432 aa11.3□□□□□ -0.6
CPNE8-201ENST00000331366 OVOS2Q6IE36 1432 aa11.3□□□□□ -0.6
CPNE8-201ENST00000331366 ZNF853P0CG23 659 aa11.3□□□□□ -0.6
CPNE8-201ENST00000331366 MVPQ14764 893 aaKnown RBP11.3□□□□□ -0.6
CPNE8-201ENST00000331366 APAF1O14727 1248 aa11.3□□□□□ -0.6
CPNE8-201ENST00000331366 PNNQ9H307 717 aaKnown RBP11.3□□□□□ -0.6
CPNE8-201ENST00000331366 USP31Q70CQ4 1352 aa11.3□□□□□ -0.6
CPNE8-201ENST00000331366 FSD2A1L4K1 749 aa11.29□□□□□ -0.6
CPNE8-201ENST00000331366 GSE1Q14687 1217 aa11.29□□□□□ -0.6
CPNE8-201ENST00000331366 RIMS2Q9UQ26 1411 aa11.29□□□□□ -0.6
CPNE8-201ENST00000331366 NFKBIBQ15653 356 aa11.29□□□□□ -0.6
CPNE8-201ENST00000331366 RGS12O14924 1447 aa11.29□□□□□ -0.6
CPNE8-201ENST00000331366 PTPRUQ92729 1446 aa11.29□□□□□ -0.6
CPNE8-201ENST00000331366 ZNF692Q9BU19 519 aaPredicted RBP11.29□□□□□ -0.6
CPNE8-201ENST00000331366 CFAP65Q6ZU64 1925 aaKnown RBP11.28□□□□□ -0.6
CPNE8-201ENST00000331366 TRIM35Q9UPQ4 493 aa11.28□□□□□ -0.6
CPNE8-201ENST00000331366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.28□□□□□ -0.6
CPNE8-201ENST00000331366 PLEKHG2Q9H7P9 1386 aa11.28□□□□□ -0.6
CPNE8-201ENST00000331366 PLIN1O60240 522 aa11.28□□□□□ -0.6
CPNE8-201ENST00000331366 NWD1Q149M9 1564 aa11.27□□□□□ -0.6
CPNE8-201ENST00000331366 MST1RQ04912 1400 aa11.27□□□□□ -0.61
CPNE8-201ENST00000331366 ABCC4O15439 1325 aa11.27□□□□□ -0.61
CPNE8-201ENST00000331366 CFAP53Q96M91 514 aa11.27□□□□□ -0.61
CPNE8-201ENST00000331366 RTL5Q5HYW3 569 aaPredicted RBP11.26□□□□□ -0.61
CPNE8-201ENST00000331366 NCAPD2Q15021 1401 aa11.26□□□□□ -0.61
CPNE8-201ENST00000331366 KIAA0232Q92628 1395 aa11.26□□□□□ -0.61
CPNE8-201ENST00000331366 TCP11L2Q8N4U5 519 aa11.25□□□□□ -0.61
CPNE8-201ENST00000331366 CIZ1Q9ULV3 898 aaPredicted RBP11.25□□□□□ -0.61
CPNE8-201ENST00000331366 TSPOAP1O95153 1857 aa11.25□□□□□ -0.61
CPNE8-201ENST00000331366 BCAR3O75815 825 aa11.25□□□□□ -0.61
CPNE8-201ENST00000331366 FCHSD2O94868 740 aa11.25□□□□□ -0.61
CPNE8-201ENST00000331366 ZBTB40Q9NUA8 1239 aa11.25□□□□□ -0.61
CPNE8-201ENST00000331366 SOS1Q07889 1333 aaPredicted RBP11.25□□□□□ -0.61
CPNE8-201ENST00000331366 FAM43AQ8N2R8 423 aa11.24□□□□□ -0.61
CPNE8-201ENST00000331366 CHMP4BQ9H444 224 aaKnown RBP11.24□□□□□ -0.61
CPNE8-201ENST00000331366 RWDD1Q9H446 243 aaPredicted RBP11.24□□□□□ -0.61
CPNE8-201ENST00000331366 UBE2Q2Q8WVN8 375 aa11.23□□□□□ -0.61
CPNE8-201ENST00000331366 SALL2Q9Y467 1007 aaPredicted RBP11.23□□□□□ -0.61
CPNE8-201ENST00000331366 CFAP44Q96MT7 982 aa11.23□□□□□ -0.61
CPNE8-201ENST00000331366 DDX19BQ9UMR2 479 aa11.23□□□□□ -0.61
CPNE8-201ENST00000331366 PCDHB15Q9Y5E8 787 aa11.23□□□□□ -0.61
CPNE8-201ENST00000331366 PTMSP20962 102 aa11.22□□□□□ -0.61
CPNE8-201ENST00000331366 ATP10DQ9P241 1426 aa11.22□□□□□ -0.61
CPNE8-201ENST00000331366 MORC1Q86VD1 984 aa11.22□□□□□ -0.61
CPNE8-201ENST00000331366 NUCB1Q02818 461 aa11.22□□□□□ -0.61
CPNE8-201ENST00000331366 ZKSCAN2Q63HK3 967 aa11.22□□□□□ -0.61
CPNE8-201ENST00000331366 RSPH6AQ9H0K4 717 aa11.22□□□□□ -0.61
CPNE8-201ENST00000331366 OVOS2A0A0G2JMS6 1433 aa11.21□□□□□ -0.61
CPNE8-201ENST00000331366 EPB41L2O43491 1005 aaKnown RBP11.21□□□□□ -0.61
CPNE8-201ENST00000331366 NEFMP07197 916 aa11.21□□□□□ -0.61
CPNE8-201ENST00000331366 TMPOP42166 694 aaKnown RBP11.21□□□□□ -0.61
CPNE8-201ENST00000331366 RLBP1P12271 317 aa11.21□□□□□ -0.62
CPNE8-201ENST00000331366 BECN1Q14457 450 aa11.21□□□□□ -0.62
CPNE8-201ENST00000331366 ADAMTS13Q76LX8 1427 aa11.21□□□□□ -0.62
CPNE8-201ENST00000331366 ANKARQ7Z5J8 1434 aa11.2□□□□□ -0.62
CPNE8-201ENST00000331366 KDRP35968 1356 aa11.2□□□□□ -0.62
CPNE8-201ENST00000331366 PARP4Q9UKK3 1724 aaKnown RBP11.19□□□□□ -0.62
CPNE8-201ENST00000331366 FYB1O15117 783 aa11.19□□□□□ -0.62
CPNE8-201ENST00000331366 MTHFSP49914 203 aa11.19□□□□□ -0.62
CPNE8-201ENST00000331366 BMP2KLQ5H9B9 411 aa11.19□□□□□ -0.62
CPNE8-201ENST00000331366 IFT57Q9NWB7 429 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms