RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 RALGAPBQ86X10 1494 aa21.19■□□□□ 0.98
TSPO-201ENST00000329563 NEUROD1Q13562 356 aa21.18■□□□□ 0.98
TSPO-201ENST00000329563 NGDNQ8NEJ9 315 aaKnown RBP21.16■□□□□ 0.98
TSPO-201ENST00000329563 NRAPQ86VF7 1730 aa21.15■□□□□ 0.98
TSPO-201ENST00000329563 POLR3AO14802 1390 aaPredicted RBP21.14■□□□□ 0.98
TSPO-201ENST00000329563 CENPJQ9HC77 1338 aaPredicted RBP21.14■□□□□ 0.97
TSPO-201ENST00000329563 FAM83GA6ND36 823 aa21.14■□□□□ 0.97
TSPO-201ENST00000329563 VPS72Q15906 364 aa21.14■□□□□ 0.97
TSPO-201ENST00000329563 CCDC9Q9Y3X0 531 aaKnown RBP21.13■□□□□ 0.97
TSPO-201ENST00000329563 BRWD3Q6RI45 1802 aa21.13■□□□□ 0.97
TSPO-201ENST00000329563 ZRANB1Q9UGI0 708 aa21.12■□□□□ 0.97
TSPO-201ENST00000329563 PHRF1Q9P1Y6 1649 aaKnown RBP21.11■□□□□ 0.97
TSPO-201ENST00000329563 ACEP12821 1306 aa21.11■□□□□ 0.97
TSPO-201ENST00000329563 COL14A1Q05707 1796 aaKnown RBP21.11■□□□□ 0.97
TSPO-201ENST00000329563 NBPF8Q3BBV2 869 aa21.11■□□□□ 0.97
TSPO-201ENST00000329563 CCER1Q8TC90 406 aaPredicted RBP21.11■□□□□ 0.97
TSPO-201ENST00000329563 BLMP54132 1417 aaPredicted RBP21.11■□□□□ 0.97
TSPO-201ENST00000329563 PLEKHG3A1L390 1219 aa21.1■□□□□ 0.97
TSPO-201ENST00000329563 PAK3O75914 559 aaPredicted RBP21.1■□□□□ 0.97
TSPO-201ENST00000329563 CABP2Q9NPB3 220 aa21.1■□□□□ 0.97
TSPO-201ENST00000329563 CCDC61Q9Y6R9 512 aa21.1■□□□□ 0.97
TSPO-201ENST00000329563 CLSPNQ9HAW4 1339 aa21.09■□□□□ 0.97
TSPO-201ENST00000329563 SF3B2Q13435 895 aaKnown RBP21.09■□□□□ 0.97
TSPO-201ENST00000329563 PPIP5K1Q6PFW1 1433 aa21.08■□□□□ 0.97
TSPO-201ENST00000329563 SEPT12Q8IYM1 358 aa21.08■□□□□ 0.97
TSPO-201ENST00000329563 SRCAPQ6ZRS2 3230 aa21.07■□□□□ 0.96
TSPO-201ENST00000329563 SRPK2P78362 688 aaKnown RBP21.07■□□□□ 0.96
TSPO-201ENST00000329563 ROCK2O75116 1388 aaKnown RBP21.07■□□□□ 0.96
TSPO-201ENST00000329563 NUTM2GQ5VZR2 741 aa21.06■□□□□ 0.96
TSPO-201ENST00000329563 A0A0G2JS52 829 aa21.05■□□□□ 0.96
TSPO-201ENST00000329563 ONECUT3O60422 494 aaPredicted RBP21.05■□□□□ 0.96
TSPO-201ENST00000329563 MYT1Q01538 1121 aa21.05■□□□□ 0.96
TSPO-201ENST00000329563 BTG4Q9NY30 223 aa21.04■□□□□ 0.96
TSPO-201ENST00000329563 NRKQ7Z2Y5 1582 aa21.04■□□□□ 0.96
TSPO-201ENST00000329563 KRT27Q7Z3Y8 459 aa21.03■□□□□ 0.96
TSPO-201ENST00000329563 KIAA0232Q92628 1395 aa21.01■□□□□ 0.95
TSPO-201ENST00000329563 PRDM11Q9NQV5 511 aa21■□□□□ 0.95
TSPO-201ENST00000329563 CABP1Q9NZU7 370 aa21■□□□□ 0.95
TSPO-201ENST00000329563 USP6P35125 1406 aa20.98■□□□□ 0.95
TSPO-201ENST00000329563 SSH2Q76I76 1423 aa20.98■□□□□ 0.95
TSPO-201ENST00000329563 ZC3H6P61129 1189 aaKnown RBP20.98■□□□□ 0.95
TSPO-201ENST00000329563 CHRNA2Q15822 529 aa20.98■□□□□ 0.95
TSPO-201ENST00000329563 USP19O94966 1318 aa20.98■□□□□ 0.95
TSPO-201ENST00000329563 FAM98CQ17RN3 349 aaKnown RBP20.97■□□□□ 0.95
TSPO-201ENST00000329563 ABTB2Q8N961 1025 aa20.97■□□□□ 0.95
TSPO-201ENST00000329563 EVC2Q86UK5 1308 aa20.97■□□□□ 0.95
TSPO-201ENST00000329563 PIK3C2AO00443 1686 aa20.96■□□□□ 0.95
TSPO-201ENST00000329563 LMO7Q8WWI1 1683 aa20.96■□□□□ 0.95
TSPO-201ENST00000329563 AKAP12Q02952 1782 aa20.96■□□□□ 0.95
TSPO-201ENST00000329563 SPATA31A5Q5VU36 1347 aa20.96■□□□□ 0.95
TSPO-201ENST00000329563 SPATA31A7Q8IWB4 1347 aa20.96■□□□□ 0.95
TSPO-201ENST00000329563 TONSLQ96HA7 1378 aa20.96■□□□□ 0.95
TSPO-201ENST00000329563 THSD7AQ9UPZ6 1657 aa20.96■□□□□ 0.95
TSPO-201ENST00000329563 RGPD1P0DJD0 1748 aa20.95■□□□□ 0.94
TSPO-201ENST00000329563 CAMTA1Q9Y6Y1 1673 aa20.94■□□□□ 0.94
TSPO-201ENST00000329563 BAG6P46379 1132 aa20.94■□□□□ 0.94
TSPO-201ENST00000329563 DEFB132Q7Z7B7 95 aa20.92■□□□□ 0.94
TSPO-201ENST00000329563 CARD11Q9BXL7 1154 aa20.92■□□□□ 0.94
TSPO-201ENST00000329563 CPDO75976 1380 aa20.92■□□□□ 0.94
TSPO-201ENST00000329563 SLIT3O75094 1523 aa20.92■□□□□ 0.94
TSPO-201ENST00000329563 BRD4O60885 1362 aaPredicted RBP20.91■□□□□ 0.94
TSPO-201ENST00000329563 SBNO2Q9Y2G9 1366 aa20.91■□□□□ 0.94
TSPO-201ENST00000329563 CPSF1Q10570 1443 aaKnown RBP20.9■□□□□ 0.94
TSPO-201ENST00000329563 SPATA31A1Q5TZJ5 1347 aa20.9■□□□□ 0.94
TSPO-201ENST00000329563 GCP02774 474 aa20.9■□□□□ 0.94
TSPO-201ENST00000329563 NLRP13Q86W25 1043 aa20.89■□□□□ 0.93
TSPO-201ENST00000329563 MON2Q7Z3U7 1717 aa20.88■□□□□ 0.93
TSPO-201ENST00000329563 STRN4Q9NRL3 753 aa20.88■□□□□ 0.93
TSPO-201ENST00000329563 CD163L1Q9NR16 1453 aa20.88■□□□□ 0.93
TSPO-201ENST00000329563 ZEB1P37275 1124 aaPredicted RBP20.87■□□□□ 0.93
TSPO-201ENST00000329563 EVA1CP58658 441 aa20.87■□□□□ 0.93
TSPO-201ENST00000329563 NLRP6P59044 892 aa20.86■□□□□ 0.93
TSPO-201ENST00000329563 FAM182BQ5T319 152 aa20.86■□□□□ 0.93
TSPO-201ENST00000329563 COL18A1P39060 1754 aa20.86■□□□□ 0.93
TSPO-201ENST00000329563 TTC21BQ7Z4L5 1316 aa20.85■□□□□ 0.93
TSPO-201ENST00000329563 LARP1Q6PKG0 1096 aaKnown RBP20.85■□□□□ 0.93
TSPO-201ENST00000329563 TIMELESSQ9UNS1 1208 aa20.85■□□□□ 0.93
TSPO-201ENST00000329563 COL5A2P05997 1499 aaPredicted RBP20.84■□□□□ 0.93
TSPO-201ENST00000329563 TNS1Q9HBL0 1735 aaKnown RBP20.82■□□□□ 0.92
TSPO-201ENST00000329563 DISP2A7MBM2 1401 aa20.82■□□□□ 0.92
TSPO-201ENST00000329563 FAM196AQ6ZSG2 479 aa20.82■□□□□ 0.92
TSPO-201ENST00000329563 ZNF692Q9BU19 519 aaPredicted RBP20.82■□□□□ 0.92
TSPO-201ENST00000329563 USP35Q9P2H5 1018 aa20.82■□□□□ 0.92
TSPO-201ENST00000329563 KTN1Q86UP2 1357 aaKnown RBP20.82■□□□□ 0.92
TSPO-201ENST00000329563 LRP5O75197 1615 aa20.82■□□□□ 0.92
TSPO-201ENST00000329563 BARGINQ6ZT62 677 aa20.81■□□□□ 0.92
TSPO-201ENST00000329563 TESK2Q96S53 571 aa20.81■□□□□ 0.92
TSPO-201ENST00000329563 NFAT5O94916 1531 aa20.81■□□□□ 0.92
TSPO-201ENST00000329563 AATKQ6ZMQ8 1374 aa20.8■□□□□ 0.92
TSPO-201ENST00000329563 USP54Q70EL1 1684 aa20.8■□□□□ 0.92
TSPO-201ENST00000329563 ZBTB7CA1YPR0 619 aa20.79■□□□□ 0.92
TSPO-201ENST00000329563 PDE3BQ13370 1112 aa20.79■□□□□ 0.92
TSPO-201ENST00000329563 THRAP3Q9Y2W1 955 aaKnown RBP20.79■□□□□ 0.92
TSPO-201ENST00000329563 RGPD5Q99666 1765 aa20.79■□□□□ 0.92
TSPO-201ENST00000329563 TTC21AQ8NDW8 1320 aa20.78■□□□□ 0.92
TSPO-201ENST00000329563 TCP11L2Q8N4U5 519 aa20.78■□□□□ 0.92
TSPO-201ENST00000329563 SLC12A5Q9H2X9 1139 aa20.78■□□□□ 0.92
TSPO-201ENST00000329563 AXIN2Q9Y2T1 843 aa20.78■□□□□ 0.92
TSPO-201ENST00000329563 ST20-MTHFSA0A0A6YYL1 179 aa20.77■□□□□ 0.92
TSPO-201ENST00000329563 EN1Q05925 392 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms