RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 RTL5Q5HYW3 569 aaPredicted RBP3.69□□□□□ -1.82
CCDC144A-201ENST00000328495 PCMTD1Q96MG8 357 aaPredicted RBP3.69□□□□□ -1.82
CCDC144A-201ENST00000328495 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.69□□□□□ -1.82
CCDC144A-201ENST00000328495 UNC93B1Q9H1C4 597 aa3.69□□□□□ -1.82
CCDC144A-201ENST00000328495 PKD2L1Q9P0L9 805 aa3.69□□□□□ -1.82
CCDC144A-201ENST00000328495 PTCRAQ6ISU1 281 aaPredicted RBP3.69□□□□□ -1.82
CCDC144A-201ENST00000328495 PROCA1Q8NCQ7 364 aaPredicted RBP3.69□□□□□ -1.82
CCDC144A-201ENST00000328495 IL27Q8NEV9 243 aa3.69□□□□□ -1.82
CCDC144A-201ENST00000328495 PRKCSHP14314 528 aaPredicted RBP3.68□□□□□ -1.82
CCDC144A-201ENST00000328495 PPP2R2DQ66LE6 453 aa3.68□□□□□ -1.82
CCDC144A-201ENST00000328495 CYP4X1Q8N118 509 aa3.68□□□□□ -1.82
CCDC144A-201ENST00000328495 F12P00748 615 aaPredicted RBP3.68□□□□□ -1.82
CCDC144A-201ENST00000328495 PKDCCQ504Y2 493 aa3.68□□□□□ -1.82
CCDC144A-201ENST00000328495 FAM187AA6NFU0 413 aa3.68□□□□□ -1.82
CCDC144A-201ENST00000328495 MAP10Q9P2G4 905 aa3.68□□□□□ -1.82
CCDC144A-201ENST00000328495 PER1O15534 1290 aaPredicted RBP3.67□□□□□ -1.82
CCDC144A-201ENST00000328495 DGAT1O75907 488 aa3.67□□□□□ -1.82
CCDC144A-201ENST00000328495 RC3H1Q5TC82 1133 aaKnown RBP3.67□□□□□ -1.82
CCDC144A-201ENST00000328495 TTC24A2A3L6 582 aaPredicted RBP3.67□□□□□ -1.82
CCDC144A-201ENST00000328495 SKOR1P84550 965 aa3.67□□□□□ -1.82
CCDC144A-201ENST00000328495 LINC01559Q495D7 138 aa3.67□□□□□ -1.82
CCDC144A-201ENST00000328495 EHBP1Q8NDI1 1231 aa3.67□□□□□ -1.82
CCDC144A-201ENST00000328495 ARMC2Q8NEN0 867 aa3.67□□□□□ -1.82
CCDC144A-201ENST00000328495 MRGPRX2Q96LB1 330 aa3.67□□□□□ -1.82
CCDC144A-201ENST00000328495 ZNF511Q8NB15 262 aa3.66□□□□□ -1.82
CCDC144A-201ENST00000328495 TOR4AQ9NXH8 423 aa3.66□□□□□ -1.82
CCDC144A-201ENST00000328495 SH3BP2P78314 561 aa3.66□□□□□ -1.82
CCDC144A-201ENST00000328495 TRAF7Q6Q0C0 670 aa3.66□□□□□ -1.82
CCDC144A-201ENST00000328495 SNIP1Q8TAD8 396 aaKnown RBP3.66□□□□□ -1.82
CCDC144A-201ENST00000328495 BAP1Q92560 729 aa3.66□□□□□ -1.82
CCDC144A-201ENST00000328495 AP1G2O75843 785 aa3.66□□□□□ -1.82
CCDC144A-201ENST00000328495 CTDSPL2Q05D32 466 aa3.66□□□□□ -1.82
CCDC144A-201ENST00000328495 NBPF14Q5TI25 921 aa3.66□□□□□ -1.82
CCDC144A-201ENST00000328495 RFC5P40937 340 aa3.65□□□□□ -1.82
CCDC144A-201ENST00000328495 USP17L8P0C7I0 530 aa3.65□□□□□ -1.83
CCDC144A-201ENST00000328495 VARSP26640 1264 aaKnown RBP3.65□□□□□ -1.83
CCDC144A-201ENST00000328495 TMEM259Q4ZIN3 620 aa3.65□□□□□ -1.83
CCDC144A-201ENST00000328495 PNMA1Q8ND90 353 aa3.65□□□□□ -1.83
CCDC144A-201ENST00000328495 GPKOWQ92917 476 aaPredicted RBP eCLIP3.65□□□□□ -1.83
CCDC144A-201ENST00000328495 AGERQ15109 404 aa3.64□□□□□ -1.83
CCDC144A-201ENST00000328495 FBXO31Q5XUX0 539 aaPredicted RBP3.64□□□□□ -1.83
CCDC144A-201ENST00000328495 BPHLQ86WA6 291 aaPredicted RBP3.64□□□□□ -1.83
CCDC144A-201ENST00000328495 LRRN4Q8WUT4 740 aa3.64□□□□□ -1.83
CCDC144A-201ENST00000328495 FAM174AQ8TBP5 190 aa3.64□□□□□ -1.83
CCDC144A-201ENST00000328495 ZC3H4Q9UPT8 1303 aaKnown RBP3.64□□□□□ -1.83
CCDC144A-201ENST00000328495 ALDH1A1P00352 501 aa3.63□□□□□ -1.83
CCDC144A-201ENST00000328495 SMPD1P17405 629 aa3.63□□□□□ -1.83
CCDC144A-201ENST00000328495 MYT1Q01538 1121 aa3.63□□□□□ -1.83
CCDC144A-201ENST00000328495 WASF2Q9Y6W5 498 aa3.63□□□□□ -1.83
CCDC144A-201ENST00000328495 SIAH2O43255 324 aa3.63□□□□□ -1.83
CCDC144A-201ENST00000328495 AVPP01185 164 aa3.63□□□□□ -1.83
CCDC144A-201ENST00000328495 CTC1Q2NKJ3 1217 aa3.63□□□□□ -1.83
CCDC144A-201ENST00000328495 FOXJ1Q92949 421 aa3.63□□□□□ -1.83
CCDC144A-201ENST00000328495 FKBPLQ9UIM3 349 aa3.63□□□□□ -1.83
CCDC144A-201ENST00000328495 J3QL48 77 aa3.62□□□□□ -1.83
CCDC144A-201ENST00000328495 NR6A1Q15406 480 aa3.62□□□□□ -1.83
CCDC144A-201ENST00000328495 TLL2Q9Y6L7 1015 aa3.62□□□□□ -1.83
CCDC144A-201ENST00000328495 LCE2BO14633 110 aa3.62□□□□□ -1.83
CCDC144A-201ENST00000328495 CRIPAKQ8N1N5 446 aa3.62□□□□□ -1.83
CCDC144A-201ENST00000328495 MPNDQ8N594 471 aa3.62□□□□□ -1.83
CCDC144A-201ENST00000328495 AXIN1O15169 862 aa3.62□□□□□ -1.83
CCDC144A-201ENST00000328495 PDXDC2PQ6P474 469 aa3.62□□□□□ -1.83
CCDC144A-201ENST00000328495 MAGEB6P1A0A0J9YX57 407 aa3.61□□□□□ -1.83
CCDC144A-201ENST00000328495 APBB1O00213 710 aa3.61□□□□□ -1.83
CCDC144A-201ENST00000328495 SH3BP5LQ7L8J4 393 aa3.61□□□□□ -1.83
CCDC144A-201ENST00000328495 BANK1Q8NDB2 785 aa3.61□□□□□ -1.83
CCDC144A-201ENST00000328495 IQSEC2Q5JU85 1478 aa3.61□□□□□ -1.83
CCDC144A-201ENST00000328495 SMCPP49901 116 aaPredicted RBP3.61□□□□□ -1.83
CCDC144A-201ENST00000328495 SH3RF1Q7Z6J0 888 aa3.61□□□□□ -1.83
CCDC144A-201ENST00000328495 ARHGAP9Q9BRR9 750 aa3.61□□□□□ -1.83
CCDC144A-201ENST00000328495 C1QTNF2Q9BXJ5 285 aa3.61□□□□□ -1.83
CCDC144A-201ENST00000328495 HMX1Q9NP08 348 aaPredicted RBP3.61□□□□□ -1.83
CCDC144A-201ENST00000328495 ST8SIA5O15466 376 aa3.6□□□□□ -1.83
CCDC144A-201ENST00000328495 ARID5BQ14865 1188 aa3.6□□□□□ -1.83
CCDC144A-201ENST00000328495 CARD14Q9BXL6 1004 aa3.6□□□□□ -1.83
CCDC144A-201ENST00000328495 AAASQ9NRG9 546 aa3.6□□□□□ -1.83
CCDC144A-201ENST00000328495 GPSM3Q9Y4H4 160 aa3.6□□□□□ -1.83
CCDC144A-201ENST00000328495 ADH1CP00326 375 aa3.6□□□□□ -1.83
CCDC144A-201ENST00000328495 PTK2Q05397 1052 aa3.6□□□□□ -1.83
CCDC144A-201ENST00000328495 C4orf48Q5BLP8 95 aa3.6□□□□□ -1.83
CCDC144A-201ENST00000328495 HPS1Q92902 700 aa3.6□□□□□ -1.83
CCDC144A-201ENST00000328495 ZBTB33Q86T24 672 aa3.6□□□□□ -1.83
CCDC144A-201ENST00000328495 TRMT44Q8IYL2 757 aaKnown RBP3.6□□□□□ -1.83
CCDC144A-201ENST00000328495 SLC10A4Q96EP9 437 aa3.6□□□□□ -1.83
CCDC144A-201ENST00000328495 CDK15Q96Q40 435 aa3.6□□□□□ -1.83
CCDC144A-201ENST00000328495 NNTQ13423 1086 aa3.59□□□□□ -1.83
CCDC144A-201ENST00000328495 EPS8L1Q8TE68 723 aa3.59□□□□□ -1.83
CCDC144A-201ENST00000328495 MAP4K5Q9Y4K4 846 aa3.59□□□□□ -1.83
CCDC144A-201ENST00000328495 NR5A1Q13285 461 aa3.59□□□□□ -1.83
CCDC144A-201ENST00000328495 ERFEQ4G0M1 354 aa3.59□□□□□ -1.83
CCDC144A-201ENST00000328495 TRIM34Q9BYJ4 488 aa3.59□□□□□ -1.83
CCDC144A-201ENST00000328495 CDV3Q9UKY7 258 aaKnown RBP3.59□□□□□ -1.83
CCDC144A-201ENST00000328495 VASH1Q7L8A9 365 aaPredicted RBP3.59□□□□□ -1.84
CCDC144A-201ENST00000328495 ZNF787Q6DD87 383 aa3.58□□□□□ -1.84
CCDC144A-201ENST00000328495 CAPN5O15484 640 aaPredicted RBP3.58□□□□□ -1.84
CCDC144A-201ENST00000328495 FSHRP23945 695 aa3.58□□□□□ -1.84
CCDC144A-201ENST00000328495 GJD4Q96KN9 370 aaPredicted RBP3.58□□□□□ -1.84
CCDC144A-201ENST00000328495 NDUFB9Q9Y6M9 179 aa3.58□□□□□ -1.84
CCDC144A-201ENST00000328495 MTMR14Q8NCE2 650 aa3.57□□□□□ -1.84
CCDC144A-201ENST00000328495 ADAM32Q8TC27 787 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms