RNA–Protein interactions for RNA: ENST00000327702.11

CACNA1C-201, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-201ENST00000327702 SLC26A8Q96RN1 970 aa12.89□□□□□ -0.35
CACNA1C-201ENST00000327702 VPS8Q8N3P4 1428 aa12.89□□□□□ -0.35
CACNA1C-201ENST00000327702 GIMAP7Q8NHV1 300 aa12.89□□□□□ -0.35
CACNA1C-201ENST00000327702 FSD1Q9BTV5 496 aa12.89□□□□□ -0.35
CACNA1C-201ENST00000327702 FMNL2Q96PY5 1086 aa12.88□□□□□ -0.35
CACNA1C-201ENST00000327702 SEPT11Q9NVA2 429 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-201ENST00000327702 CUX2O14529 1486 aa12.88□□□□□ -0.35
CACNA1C-201ENST00000327702 HMGN5P82970 282 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-201ENST00000327702 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.88□□□□□ -0.35
CACNA1C-201ENST00000327702 TAF3Q5VWG9 929 aa12.88□□□□□ -0.35
CACNA1C-201ENST00000327702 JAKMIP3Q5VZ66 844 aa12.88□□□□□ -0.35
CACNA1C-201ENST00000327702 SPC24Q8NBT2 197 aa12.88□□□□□ -0.35
CACNA1C-201ENST00000327702 HIP1O00291 1037 aa12.88□□□□□ -0.35
CACNA1C-201ENST00000327702 ATP2B1P20020 1258 aa12.88□□□□□ -0.35
CACNA1C-201ENST00000327702 CBFA2T2O43439 604 aa12.87□□□□□ -0.35
CACNA1C-201ENST00000327702 STAMBPO95630 424 aa12.87□□□□□ -0.35
CACNA1C-201ENST00000327702 MBD3O95983 291 aa12.87□□□□□ -0.35
CACNA1C-201ENST00000327702 PSME1Q06323 249 aa12.87□□□□□ -0.35
CACNA1C-201ENST00000327702 CAVIN1Q6NZI2 390 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-201ENST00000327702 NF2P35240 595 aa12.87□□□□□ -0.35
CACNA1C-201ENST00000327702 MATR3P43243 847 aaKnown RBP eCLIP12.87□□□□□ -0.35
CACNA1C-201ENST00000327702 STK38Q15208 465 aa12.87□□□□□ -0.35
CACNA1C-201ENST00000327702 ZHX3Q9H4I2 956 aa12.87□□□□□ -0.35
CACNA1C-201ENST00000327702 FANCIQ9NVI1 1328 aa12.87□□□□□ -0.35
CACNA1C-201ENST00000327702 LRRCC1Q9C099 1032 aa12.87□□□□□ -0.35
CACNA1C-201ENST00000327702 UBTFL1P0CB47 393 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-201ENST00000327702 AIMP1Q12904 312 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-201ENST00000327702 HNRNPMP52272 730 aaKnown RBP eCLIP12.86□□□□□ -0.35
CACNA1C-201ENST00000327702 RBM10P98175 930 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-201ENST00000327702 TTC39AQ5SRH9 613 aa12.86□□□□□ -0.35
CACNA1C-201ENST00000327702 DNAJC2Q99543 621 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-201ENST00000327702 TRIM21P19474 475 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-201ENST00000327702 KIF6Q6ZMV9 814 aa12.85□□□□□ -0.35
CACNA1C-201ENST00000327702 JMYQ8N9B5 988 aa12.85□□□□□ -0.35
CACNA1C-201ENST00000327702 LNPKQ9C0E8 428 aa12.85□□□□□ -0.35
CACNA1C-201ENST00000327702 CEP63Q96MT8 703 aa12.85□□□□□ -0.35
CACNA1C-201ENST00000327702 PDCP20941 246 aa12.84□□□□□ -0.35
CACNA1C-201ENST00000327702 GNAI1P63096 354 aa12.84□□□□□ -0.35
CACNA1C-201ENST00000327702 L3MBTL2Q969R5 705 aa12.84□□□□□ -0.35
CACNA1C-201ENST00000327702 MAP2K1Q02750 393 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-201ENST00000327702 SPDYE4A6NLX3 237 aa12.84□□□□□ -0.35
CACNA1C-201ENST00000327702 ZBED9Q6R2W3 1325 aa12.84□□□□□ -0.35
CACNA1C-201ENST00000327702 MPHOSPH10O00566 681 aaKnown RBP12.84□□□□□ -0.35
CACNA1C-201ENST00000327702 CCDC144AA2RUR9 1427 aa12.84□□□□□ -0.35
CACNA1C-201ENST00000327702 CEBPZQ03701 1054 aaKnown RBP12.83□□□□□ -0.35
CACNA1C-201ENST00000327702 TRAK2O60296 914 aa12.83□□□□□ -0.36
CACNA1C-201ENST00000327702 ATP2B2Q01814 1243 aa12.83□□□□□ -0.36
CACNA1C-201ENST00000327702 DNAI2Q9GZS0 605 aa12.83□□□□□ -0.36
CACNA1C-201ENST00000327702 APAF1O14727 1248 aa12.83□□□□□ -0.36
CACNA1C-201ENST00000327702 RUNDC1Q96C34 613 aa12.83□□□□□ -0.36
CACNA1C-201ENST00000327702 MCM2P49736 904 aa12.83□□□□□ -0.36
CACNA1C-201ENST00000327702 GOLGA6L10A0A0M3HER8 536 aa12.83□□□□□ -0.36
CACNA1C-201ENST00000327702 PRPF40AO75400 957 aaKnown RBP12.83□□□□□ -0.36
CACNA1C-201ENST00000327702 PPM1EQ8WY54 764 aa12.83□□□□□ -0.36
CACNA1C-201ENST00000327702 RAPGEF4Q8WZA2 1011 aa12.83□□□□□ -0.36
CACNA1C-201ENST00000327702 TAF4BQ92750 862 aa12.83□□□□□ -0.36
CACNA1C-201ENST00000327702 CCDC69A6NI79 296 aa12.82□□□□□ -0.36
CACNA1C-201ENST00000327702 CCDC192P0DO97 292 aa12.82□□□□□ -0.36
CACNA1C-201ENST00000327702 NFKBIBQ15653 356 aa12.82□□□□□ -0.36
CACNA1C-201ENST00000327702 MINK1Q8N4C8 1332 aaPredicted RBP12.82□□□□□ -0.36
CACNA1C-201ENST00000327702 SSR1P43307 286 aaKnown RBP12.82□□□□□ -0.36
CACNA1C-201ENST00000327702 CCDC57Q2TAC2 916 aa12.82□□□□□ -0.36
CACNA1C-201ENST00000327702 SOGA3Q5TF21 947 aa12.82□□□□□ -0.36
CACNA1C-201ENST00000327702 TNMDQ9H2S6 317 aa12.82□□□□□ -0.36
CACNA1C-201ENST00000327702 GNL3LQ9NVN8 582 aaKnown RBP12.82□□□□□ -0.36
CACNA1C-201ENST00000327702 LRRFIP2Q9Y608 721 aaKnown RBP12.82□□□□□ -0.36
CACNA1C-201ENST00000327702 ERC1Q8IUD2 1116 aa12.82□□□□□ -0.36
CACNA1C-201ENST00000327702 AEBP1Q8IUX7 1158 aa12.82□□□□□ -0.36
CACNA1C-201ENST00000327702 PLCD3Q8N3E9 789 aa12.82□□□□□ -0.36
CACNA1C-201ENST00000327702 CCDC102AQ96A19 550 aa12.82□□□□□ -0.36
CACNA1C-201ENST00000327702 PKNOX2Q96KN3 472 aa12.82□□□□□ -0.36
CACNA1C-201ENST00000327702 VGFO15240 615 aaPredicted RBP12.81□□□□□ -0.36
CACNA1C-201ENST00000327702 AAMPQ13685 434 aa12.81□□□□□ -0.36
CACNA1C-201ENST00000327702 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.81□□□□□ -0.36
CACNA1C-201ENST00000327702 NOL7Q9UMY1 257 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-201ENST00000327702 POTEJP0CG39 1038 aa12.81□□□□□ -0.36
CACNA1C-201ENST00000327702 CCDC148Q8NFR7 591 aa12.81□□□□□ -0.36
CACNA1C-201ENST00000327702 FAM177BA6PVY3 158 aa12.81□□□□□ -0.36
CACNA1C-201ENST00000327702 KIAA1328Q86T90 577 aa12.81□□□□□ -0.36
CACNA1C-201ENST00000327702 FAM177A1Q8N128 213 aaPredicted RBP12.81□□□□□ -0.36
CACNA1C-201ENST00000327702 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
CACNA1C-201ENST00000327702 RSPH4AQ5TD94 716 aa12.81□□□□□ -0.36
CACNA1C-201ENST00000327702 ANAPC15P60006 121 aa12.8□□□□□ -0.36
CACNA1C-201ENST00000327702 CCDC158Q5M9N0 1113 aa12.8□□□□□ -0.36
CACNA1C-201ENST00000327702 TRIM22Q8IYM9 498 aa12.8□□□□□ -0.36
CACNA1C-201ENST00000327702 CFAP45Q9UL16 551 aa12.8□□□□□ -0.36
CACNA1C-201ENST00000327702 SHTN1A0MZ66 631 aa12.79□□□□□ -0.36
CACNA1C-201ENST00000327702 ATF3P18847 181 aa12.79□□□□□ -0.36
CACNA1C-201ENST00000327702 ST20-MTHFSA0A0A6YYL1 179 aa12.79□□□□□ -0.36
CACNA1C-201ENST00000327702 FIBPO43427 364 aa12.79□□□□□ -0.36
CACNA1C-201ENST00000327702 CCDC18Q5T9S5 1454 aa12.79□□□□□ -0.36
CACNA1C-201ENST00000327702 ANKRD1Q15327 319 aa12.79□□□□□ -0.36
CACNA1C-201ENST00000327702 CETN2P41208 172 aa12.78□□□□□ -0.36
CACNA1C-201ENST00000327702 TMEM87AQ8NBN3 555 aa12.78□□□□□ -0.36
CACNA1C-201ENST00000327702 BMP2KQ9NSY1 1161 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-201ENST00000327702 UQCRHLA0A096LP55 91 aa12.78□□□□□ -0.36
CACNA1C-201ENST00000327702 UQCRHP07919 91 aa12.78□□□□□ -0.36
CACNA1C-201ENST00000327702 CNNM1Q9NRU3 951 aa12.78□□□□□ -0.36
CACNA1C-201ENST00000327702 ZNF397Q8NF99 534 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-201ENST00000327702 RBM5P52756 815 aaKnown RBP eCLIP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms