RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ZBTB40Q9NUA8 1239 aa15.92■□□□□ 0.14
CCDC60-201ENST00000327554 USP32Q8NFA0 1604 aa15.92■□□□□ 0.14
CCDC60-201ENST00000327554 ADGRL1O94910 1474 aa15.92■□□□□ 0.14
CCDC60-201ENST00000327554 ATF7IPQ6VMQ6 1270 aa15.91■□□□□ 0.14
CCDC60-201ENST00000327554 TSR2Q969E8 191 aaKnown RBP15.91■□□□□ 0.14
CCDC60-201ENST00000327554 BMP2KLQ5H9B9 411 aa15.91■□□□□ 0.14
CCDC60-201ENST00000327554 SSH1Q8WYL5 1049 aa15.91■□□□□ 0.14
CCDC60-201ENST00000327554 LNPKQ9C0E8 428 aa15.91■□□□□ 0.14
CCDC60-201ENST00000327554 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
CCDC60-201ENST00000327554 PODXL2Q9NZ53 605 aa15.9■□□□□ 0.14
CCDC60-201ENST00000327554 CFAP70Q5T0N1 1121 aa15.9■□□□□ 0.14
CCDC60-201ENST00000327554 SBNO2Q9Y2G9 1366 aa15.9■□□□□ 0.14
CCDC60-201ENST00000327554 NEURL4Q96JN8 1562 aa15.89■□□□□ 0.13
CCDC60-201ENST00000327554 NOS1P29475 1434 aa15.89■□□□□ 0.13
CCDC60-201ENST00000327554 EXOSC9Q06265 439 aaKnown RBP15.89■□□□□ 0.13
CCDC60-201ENST00000327554 CHD1LQ86WJ1 897 aa15.89■□□□□ 0.13
CCDC60-201ENST00000327554 TMEM57Q8N5G2 664 aa15.89■□□□□ 0.13
CCDC60-201ENST00000327554 ZC3H13Q5T200 1668 aaKnown RBP15.89■□□□□ 0.13
CCDC60-201ENST00000327554 UQCRHLA0A096LP55 91 aa15.89■□□□□ 0.13
CCDC60-201ENST00000327554 UQCRHP07919 91 aa15.89■□□□□ 0.13
CCDC60-201ENST00000327554 MTHFSP49914 203 aa15.89■□□□□ 0.13
CCDC60-201ENST00000327554 XPCQ01831 940 aaPredicted RBP15.88■□□□□ 0.13
CCDC60-201ENST00000327554 RBSNQ9H1K0 784 aa15.88■□□□□ 0.13
CCDC60-201ENST00000327554 IFT172Q9UG01 1749 aa15.88■□□□□ 0.13
CCDC60-201ENST00000327554 MYOM2P54296 1465 aa15.88■□□□□ 0.13
CCDC60-201ENST00000327554 PPRC1Q5VV67 1664 aaKnown RBP15.88■□□□□ 0.13
CCDC60-201ENST00000327554 FBLN2P98095 1184 aa15.88■□□□□ 0.13
CCDC60-201ENST00000327554 ZSCAN23Q3MJ62 389 aa15.88■□□□□ 0.13
CCDC60-201ENST00000327554 NOB1Q9ULX3 412 aaKnown RBP15.88■□□□□ 0.13
CCDC60-201ENST00000327554 TET3O43151 1660 aa15.87■□□□□ 0.13
CCDC60-201ENST00000327554 SMAP1Q8IYB5 467 aaPredicted RBP15.87■□□□□ 0.13
CCDC60-201ENST00000327554 INO80Q9ULG1 1556 aaPredicted RBP15.86■□□□□ 0.13
CCDC60-201ENST00000327554 DEPDC5O75140 1603 aa15.86■□□□□ 0.13
CCDC60-201ENST00000327554 CAVIN1Q6NZI2 390 aaKnown RBP15.86■□□□□ 0.13
CCDC60-201ENST00000327554 TBC1D9Q6ZT07 1266 aa15.86■□□□□ 0.13
CCDC60-201ENST00000327554 LMBRD1Q9NUN5 540 aa15.86■□□□□ 0.13
CCDC60-201ENST00000327554 DYNC1I1O14576 645 aa15.85■□□□□ 0.13
CCDC60-201ENST00000327554 CD109Q6YHK3 1445 aa15.85■□□□□ 0.13
CCDC60-201ENST00000327554 CFAP53Q96M91 514 aa15.85■□□□□ 0.13
CCDC60-201ENST00000327554 ZKSCAN5Q9Y2L8 839 aa15.85■□□□□ 0.13
CCDC60-201ENST00000327554 CYP2E1P05181 493 aaPredicted RBP15.85■□□□□ 0.13
CCDC60-201ENST00000327554 KIF16BQ96L93 1317 aa15.84■□□□□ 0.13
CCDC60-201ENST00000327554 MCTP1Q6DN14 999 aa15.84■□□□□ 0.13
CCDC60-201ENST00000327554 MTERF4Q7Z6M4 381 aaKnown RBP15.84■□□□□ 0.13
CCDC60-201ENST00000327554 ABCC11Q96J66 1382 aa15.84■□□□□ 0.13
CCDC60-201ENST00000327554 ADGRF5Q8IZF2 1346 aa15.84■□□□□ 0.13
CCDC60-201ENST00000327554 U2AF1L5P0DN76 240 aaPredicted RBP15.83■□□□□ 0.12
CCDC60-201ENST00000327554 PRIM1P49642 420 aaKnown RBP15.83■□□□□ 0.12
CCDC60-201ENST00000327554 U2AF1Q01081 240 aaKnown RBP eCLIP15.83■□□□□ 0.12
CCDC60-201ENST00000327554 SLC12A5Q9H2X9 1139 aa15.83■□□□□ 0.12
CCDC60-201ENST00000327554 QRICH2Q9H0J4 1663 aa15.83■□□□□ 0.12
CCDC60-201ENST00000327554 CSPP1Q1MSJ5 1256 aa15.83■□□□□ 0.12
CCDC60-201ENST00000327554 MED14O60244 1454 aa15.82■□□□□ 0.12
CCDC60-201ENST00000327554 KIF1BO60333 1816 aa15.82■□□□□ 0.12
CCDC60-201ENST00000327554 MCM5P33992 734 aa15.82■□□□□ 0.12
CCDC60-201ENST00000327554 TRIM35Q9UPQ4 493 aa15.82■□□□□ 0.12
CCDC60-201ENST00000327554 PPIP5K1Q6PFW1 1433 aa15.81■□□□□ 0.12
CCDC60-201ENST00000327554 REREQ9P2R6 1566 aa15.81■□□□□ 0.12
CCDC60-201ENST00000327554 NCLP19338 710 aaKnown RBP15.81■□□□□ 0.12
CCDC60-201ENST00000327554 ABCC1P33527 1531 aa15.81■□□□□ 0.12
CCDC60-201ENST00000327554 UGGT1Q9NYU2 1555 aa15.81■□□□□ 0.12
CCDC60-201ENST00000327554 NUCB2P80303 420 aa15.8■□□□□ 0.12
CCDC60-201ENST00000327554 SASS6Q6UVJ0 657 aa15.8■□□□□ 0.12
CCDC60-201ENST00000327554 MROH2AA6NES4 1674 aa15.8■□□□□ 0.12
CCDC60-201ENST00000327554 ANKRD45Q5TZF3 282 aa15.8■□□□□ 0.12
CCDC60-201ENST00000327554 NRXN1Q9ULB1 1477 aa15.8■□□□□ 0.12
CCDC60-201ENST00000327554 PKP1Q13835 747 aa15.79■□□□□ 0.12
CCDC60-201ENST00000327554 GPT2Q8TD30 523 aa15.79■□□□□ 0.12
CCDC60-201ENST00000327554 PLEKHF1Q96S99 279 aa15.79■□□□□ 0.12
CCDC60-201ENST00000327554 VWDEQ8N2E2 1590 aa15.79■□□□□ 0.12
CCDC60-201ENST00000327554 SETBP1Q9Y6X0 1596 aa15.79■□□□□ 0.12
CCDC60-201ENST00000327554 TRAPPC8Q9Y2L5 1435 aa15.79■□□□□ 0.12
CCDC60-201ENST00000327554 TMPOP42166 694 aaKnown RBP15.79■□□□□ 0.12
CCDC60-201ENST00000327554 IPO8O15397 1037 aaKnown RBP15.78■□□□□ 0.12
CCDC60-201ENST00000327554 GCC1Q96CN9 775 aa15.78■□□□□ 0.12
CCDC60-201ENST00000327554 RBM27Q9P2N5 1060 aaKnown RBP15.78■□□□□ 0.12
CCDC60-201ENST00000327554 IL16Q14005 1332 aa15.78■□□□□ 0.12
CCDC60-201ENST00000327554 RABEP1Q15276 862 aa15.77■□□□□ 0.12
CCDC60-201ENST00000327554 ARID3AQ99856 593 aa15.77■□□□□ 0.12
CCDC60-201ENST00000327554 CCDC39Q9UFE4 941 aa15.77■□□□□ 0.12
CCDC60-201ENST00000327554 CDC45O75419 566 aa15.77■□□□□ 0.11
CCDC60-201ENST00000327554 PLEKHG5O94827 1062 aa15.77■□□□□ 0.11
CCDC60-201ENST00000327554 LRSAM1Q6UWE0 723 aa15.76■□□□□ 0.11
CCDC60-201ENST00000327554 ZFYVE16Q7Z3T8 1539 aa15.76■□□□□ 0.11
CCDC60-201ENST00000327554 PRDM10Q9NQV6 1147 aa15.76■□□□□ 0.11
CCDC60-201ENST00000327554 PRPF40AO75400 957 aaKnown RBP15.75■□□□□ 0.11
CCDC60-201ENST00000327554 ALDH1L2Q3SY69 923 aa15.75■□□□□ 0.11
CCDC60-201ENST00000327554 CCDC94Q9BW85 323 aaPredicted RBP15.75■□□□□ 0.11
CCDC60-201ENST00000327554 TMEM63CQ9P1W3 806 aa15.75■□□□□ 0.11
CCDC60-201ENST00000327554 COL3A1P02461 1466 aaPredicted RBP15.75■□□□□ 0.11
CCDC60-201ENST00000327554 NSD2O96028 1365 aa15.75■□□□□ 0.11
CCDC60-201ENST00000327554 ZBTB7BO15156 539 aaPredicted RBP15.75■□□□□ 0.11
CCDC60-201ENST00000327554 PLCH2O75038 1416 aa15.75■□□□□ 0.11
CCDC60-201ENST00000327554 UTP14CQ5TAP6 766 aaKnown RBP15.74■□□□□ 0.11
CCDC60-201ENST00000327554 ZDHHC9Q9Y397 364 aa15.74■□□□□ 0.11
CCDC60-201ENST00000327554 GSPT1P15170 499 aaKnown RBP15.74■□□□□ 0.11
CCDC60-201ENST00000327554 DMTNQ08495 405 aa15.74■□□□□ 0.11
CCDC60-201ENST00000327554 SIRT2Q8IXJ6 389 aa15.74■□□□□ 0.11
CCDC60-201ENST00000327554 C1orf115Q9H7X2 142 aa15.73■□□□□ 0.11
CCDC60-201ENST00000327554 SYCE3A1L190 88 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms