RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 MCM4P33991 863 aa19.59■□□□□ 0.73
SMAD3-201ENST00000327367 PPFIBP1Q86W92 1011 aa19.59■□□□□ 0.73
SMAD3-201ENST00000327367 GTF2F1P35269 517 aaKnown RBP eCLIP19.59■□□□□ 0.731e-8■■■■■ 46.3
SMAD3-201ENST00000327367 CTDP1Q9Y5B0 961 aaPredicted RBP19.59■□□□□ 0.73
SMAD3-201ENST00000327367 TEFQ10587 303 aa19.59■□□□□ 0.73
SMAD3-201ENST00000327367 STK38Q15208 465 aa19.59■□□□□ 0.73
SMAD3-201ENST00000327367 ZNF428Q96B54 188 aa19.59■□□□□ 0.73
SMAD3-201ENST00000327367 ZSCAN30Q86W11 494 aa19.58■□□□□ 0.73
SMAD3-201ENST00000327367 VPS37DQ86XT2 251 aa19.58■□□□□ 0.73
SMAD3-201ENST00000327367 ERLIN2O94905 339 aa19.58■□□□□ 0.73
SMAD3-201ENST00000327367 K7ELQ4 463 aaPredicted RBP19.58■□□□□ 0.72
SMAD3-201ENST00000327367 PSMA5P28066 241 aa19.58■□□□□ 0.72
SMAD3-201ENST00000327367 PPP4R3BQ5MIZ7 849 aa19.58■□□□□ 0.72
SMAD3-201ENST00000327367 CLASRPQ8N2M8 674 aaKnown RBP19.58■□□□□ 0.72
SMAD3-201ENST00000327367 FSD1Q9BTV5 496 aa19.58■□□□□ 0.72
SMAD3-201ENST00000327367 ROCK1Q13464 1354 aa19.58■□□□□ 0.72
SMAD3-201ENST00000327367 COG3Q96JB2 828 aa19.57■□□□□ 0.72
SMAD3-201ENST00000327367 CAMK4Q16566 473 aa19.57■□□□□ 0.72
SMAD3-201ENST00000327367 RSPH4AQ5TD94 716 aa19.57■□□□□ 0.72
SMAD3-201ENST00000327367 CNTROBQ8N137 903 aa19.57■□□□□ 0.72
SMAD3-201ENST00000327367 RUNDC1Q96C34 613 aa19.57■□□□□ 0.72
SMAD3-201ENST00000327367 KIF3BO15066 747 aa19.57■□□□□ 0.72
SMAD3-201ENST00000327367 DIAPH1O60610 1272 aaKnown RBP19.56■□□□□ 0.72
SMAD3-201ENST00000327367 AIMP1Q12904 312 aaKnown RBP19.56■□□□□ 0.72
SMAD3-201ENST00000327367 RABEP1Q15276 862 aa19.56■□□□□ 0.72
SMAD3-201ENST00000327367 DNAJC2Q99543 621 aaKnown RBP19.56■□□□□ 0.72
SMAD3-201ENST00000327367 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.56■□□□□ 0.724e-8■■■□□ 17
SMAD3-201ENST00000327367 BRMS1Q9HCU9 246 aa19.56■□□□□ 0.72
SMAD3-201ENST00000327367 NINLQ9Y2I6 1382 aa19.55■□□□□ 0.72
SMAD3-201ENST00000327367 TMCO3Q6UWJ1 677 aa19.55■□□□□ 0.72
SMAD3-201ENST00000327367 INCENPQ9NQS7 918 aa19.55■□□□□ 0.72
SMAD3-201ENST00000327367 ME1P48163 572 aa19.55■□□□□ 0.72
SMAD3-201ENST00000327367 ABCC8Q09428 1581 aa19.55■□□□□ 0.72
SMAD3-201ENST00000327367 CUX2O14529 1486 aa19.55■□□□□ 0.72
SMAD3-201ENST00000327367 SKAP1Q86WV1 359 aa19.55■□□□□ 0.72
SMAD3-201ENST00000327367 UBXN4Q92575 508 aa19.54■□□□□ 0.72
SMAD3-201ENST00000327367 ZNHIT6Q9NWK9 470 aaKnown RBP19.54■□□□□ 0.72
SMAD3-201ENST00000327367 GOLGA6L10A0A0M3HER8 536 aa19.54■□□□□ 0.72
SMAD3-201ENST00000327367 BCAR3O75815 825 aa19.53■□□□□ 0.72
SMAD3-201ENST00000327367 RBM33Q96EV2 1170 aaKnown RBP19.53■□□□□ 0.72
SMAD3-201ENST00000327367 SRRTQ9BXP5 876 aaKnown RBP19.53■□□□□ 0.72
SMAD3-201ENST00000327367 TSPYL4Q9UJ04 414 aa19.53■□□□□ 0.72
SMAD3-201ENST00000327367 ZNF396Q96N95 335 aaPredicted RBP19.53■□□□□ 0.72
SMAD3-201ENST00000327367 PDCL3Q9H2J4 239 aa19.53■□□□□ 0.72
SMAD3-201ENST00000327367 RNF187Q5TA31 235 aaPredicted RBP19.53■□□□□ 0.72
SMAD3-201ENST00000327367 ADAMTS8Q9UP79 889 aa19.53■□□□□ 0.72
SMAD3-201ENST00000327367 BBXQ8WY36 941 aaPredicted RBP19.53■□□□□ 0.72
SMAD3-201ENST00000327367 MINK1Q8N4C8 1332 aaPredicted RBP19.52■□□□□ 0.72
SMAD3-201ENST00000327367 TANGO6Q9C0B7 1094 aa19.52■□□□□ 0.72
SMAD3-201ENST00000327367 TTC5Q8N0Z6 440 aa19.52■□□□□ 0.71
SMAD3-201ENST00000327367 SHTN1A0MZ66 631 aa19.5■□□□□ 0.71
SMAD3-201ENST00000327367 KIF7Q2M1P5 1343 aa19.5■□□□□ 0.71
SMAD3-201ENST00000327367 UBTFL1P0CB47 393 aaPredicted RBP19.5■□□□□ 0.71
SMAD3-201ENST00000327367 CALCOCO1Q9P1Z2 691 aa19.5■□□□□ 0.71
SMAD3-201ENST00000327367 CCAR1Q8IX12 1150 aaKnown RBP19.49■□□□□ 0.71
SMAD3-201ENST00000327367 SYCP1Q15431 976 aa19.49■□□□□ 0.71
SMAD3-201ENST00000327367 CDK5RAP3Q96JB5 506 aa19.49■□□□□ 0.71
SMAD3-201ENST00000327367 CCDC113Q9H0I3 377 aa19.49■□□□□ 0.71
SMAD3-201ENST00000327367 CWC22Q9HCG8 908 aaKnown RBP19.49■□□□□ 0.71
SMAD3-201ENST00000327367 XBP1P17861 261 aa19.48■□□□□ 0.71
SMAD3-201ENST00000327367 TRMT1Q9NXH9 659 aaKnown RBP19.48■□□□□ 0.71
SMAD3-201ENST00000327367 CFAP45Q9UL16 551 aa19.48■□□□□ 0.71
SMAD3-201ENST00000327367 SURF6O75683 361 aaKnown RBP19.48■□□□□ 0.71
SMAD3-201ENST00000327367 NUP62CLQ9H1M0 184 aa19.48■□□□□ 0.71
SMAD3-201ENST00000327367 SEPT11Q9NVA2 429 aaKnown RBP19.48■□□□□ 0.71
SMAD3-201ENST00000327367 WDR33Q9C0J8 1336 aaKnown RBP19.47■□□□□ 0.71
SMAD3-201ENST00000327367 SPATA32Q96LK8 384 aa19.47■□□□□ 0.71
SMAD3-201ENST00000327367 PTPN14Q15678 1187 aa19.47■□□□□ 0.71
SMAD3-201ENST00000327367 NOB1Q9ULX3 412 aaKnown RBP19.47■□□□□ 0.71
SMAD3-201ENST00000327367 CCDC7Q96M83 1385 aa19.47■□□□□ 0.71
SMAD3-201ENST00000327367 LARP1BQ659C4 914 aaKnown RBP19.46■□□□□ 0.71
SMAD3-201ENST00000327367 MAP2K1Q02750 393 aaPredicted RBP19.46■□□□□ 0.71
SMAD3-201ENST00000327367 ZHX3Q9H4I2 956 aa19.46■□□□□ 0.71
SMAD3-201ENST00000327367 URI1O94763 535 aaPredicted RBP19.46■□□□□ 0.71
SMAD3-201ENST00000327367 KRT18P05783 430 aaKnown RBP19.46■□□□□ 0.71
SMAD3-201ENST00000327367 HSP90AB4PQ58FF6 505 aa19.46■□□□□ 0.71
SMAD3-201ENST00000327367 CRACR2AQ9BSW2 395 aa19.46■□□□□ 0.71
SMAD3-201ENST00000327367 RIC3Q7Z5B4 369 aa19.46■□□□□ 0.71
SMAD3-201ENST00000327367 UPF3BQ9BZI7 483 aaKnown RBP19.46■□□□□ 0.71
SMAD3-201ENST00000327367 PDCP20941 246 aa19.45■□□□□ 0.7
SMAD3-201ENST00000327367 MCM2P49736 904 aa19.45■□□□□ 0.7
SMAD3-201ENST00000327367 C16orf45Q96MC5 204 aaPredicted RBP19.45■□□□□ 0.7
SMAD3-201ENST00000327367 CNTLNQ9NXG0 1405 aa19.45■□□□□ 0.7
SMAD3-201ENST00000327367 DDX58O95786 925 aaKnown RBP19.45■□□□□ 0.7
SMAD3-201ENST00000327367 KRT85P78386 507 aa19.45■□□□□ 0.7
SMAD3-201ENST00000327367 BCCIPQ9P287 314 aaKnown RBP eCLIP19.45■□□□□ 0.7
SMAD3-201ENST00000327367 KIAA1328Q86T90 577 aa19.45■□□□□ 0.7
SMAD3-201ENST00000327367 ZBTB9Q96C00 473 aa19.45■□□□□ 0.7
SMAD3-201ENST00000327367 CBFA2T2O43439 604 aa19.45■□□□□ 0.7
SMAD3-201ENST00000327367 CASQ1P31415 396 aa19.45■□□□□ 0.7
SMAD3-201ENST00000327367 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
SMAD3-201ENST00000327367 CCDC144AA2RUR9 1427 aa19.44■□□□□ 0.7
SMAD3-201ENST00000327367 GNAI1P63096 354 aa19.44■□□□□ 0.7
SMAD3-201ENST00000327367 PLCD3Q8N3E9 789 aa19.44■□□□□ 0.7
SMAD3-201ENST00000327367 CYP46A1Q9Y6A2 500 aa19.43■□□□□ 0.7
SMAD3-201ENST00000327367 GTF2A1P52655 376 aaPredicted RBP19.43■□□□□ 0.7
SMAD3-201ENST00000327367 EVC2Q86UK5 1308 aa19.43■□□□□ 0.7
SMAD3-201ENST00000327367 EXOSC9Q06265 439 aaKnown RBP19.42■□□□□ 0.7
SMAD3-201ENST00000327367 NF2P35240 595 aa19.42■□□□□ 0.7
SMAD3-201ENST00000327367 TXLNAP40222 546 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms