RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 EXOC6Q8TAG9 804 aa13.45□□□□□ -0.26
ABCF1-201ENST00000326195 ARHGAP23Q9P227 1491 aa13.45□□□□□ -0.26
ABCF1-201ENST00000326195 ZC3H6P61129 1189 aaKnown RBP13.45□□□□□ -0.26
ABCF1-201ENST00000326195 IQGAP1P46940 1657 aa13.44□□□□□ -0.26
ABCF1-201ENST00000326195 MSH6P52701 1360 aa13.44□□□□□ -0.26
ABCF1-201ENST00000326195 ADGRB1O14514 1584 aa13.43□□□□□ -0.26
ABCF1-201ENST00000326195 KTN1Q86UP2 1357 aaKnown RBP13.43□□□□□ -0.26
ABCF1-201ENST00000326195 CADPS2Q86UW7 1296 aa13.43□□□□□ -0.26
ABCF1-201ENST00000326195 VSIG10Q8N0Z9 540 aa13.43□□□□□ -0.26
ABCF1-201ENST00000326195 PPIP5K1Q6PFW1 1433 aa13.43□□□□□ -0.26
ABCF1-201ENST00000326195 SLIT1O75093 1534 aa13.43□□□□□ -0.26
ABCF1-201ENST00000326195 NEUROD2Q15784 382 aa13.43□□□□□ -0.26
ABCF1-201ENST00000326195 NRXN1Q9ULB1 1477 aa13.42□□□□□ -0.26
ABCF1-201ENST00000326195 NSD3Q9BZ95 1437 aa13.42□□□□□ -0.26
ABCF1-201ENST00000326195 TCERG1O14776 1098 aaKnown RBP13.42□□□□□ -0.26
ABCF1-201ENST00000326195 U2SURPO15042 1029 aaKnown RBP13.42□□□□□ -0.26
ABCF1-201ENST00000326195 KRT28Q7Z3Y7 464 aa13.42□□□□□ -0.26
ABCF1-201ENST00000326195 FAM43AQ8N2R8 423 aa13.41□□□□□ -0.26
ABCF1-201ENST00000326195 ADAMTS2O95450 1211 aa13.4□□□□□ -0.26
ABCF1-201ENST00000326195 A0A1W2PP64 1363 aa13.4□□□□□ -0.26
ABCF1-201ENST00000326195 FRAT2O75474 233 aaPredicted RBP13.39□□□□□ -0.27
ABCF1-201ENST00000326195 CHRNA2Q15822 529 aa13.39□□□□□ -0.27
ABCF1-201ENST00000326195 RRAGDQ9NQL2 400 aaPredicted RBP13.39□□□□□ -0.27
ABCF1-201ENST00000326195 FYB1O15117 783 aa13.39□□□□□ -0.27
ABCF1-201ENST00000326195 COG3Q96JB2 828 aa13.38□□□□□ -0.27
ABCF1-201ENST00000326195 CCDC146Q8IYE0 955 aa13.38□□□□□ -0.27
ABCF1-201ENST00000326195 EMILIN1Q9Y6C2 1016 aa13.38□□□□□ -0.27
ABCF1-201ENST00000326195 CGNL1Q0VF96 1302 aa13.38□□□□□ -0.27
ABCF1-201ENST00000326195 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
ABCF1-201ENST00000326195 MTHFSP49914 203 aa13.38□□□□□ -0.27
ABCF1-201ENST00000326195 ATAD2Q6PL18 1390 aa13.37□□□□□ -0.27
ABCF1-201ENST00000326195 A0A0G2JS52 829 aa13.37□□□□□ -0.27
ABCF1-201ENST00000326195 SLC24A1O60721 1099 aa13.37□□□□□ -0.27
ABCF1-201ENST00000326195 NRXN3Q9Y4C0 1643 aa13.36□□□□□ -0.27
ABCF1-201ENST00000326195 BRINP3Q76B58 766 aa13.36□□□□□ -0.27
ABCF1-201ENST00000326195 AMPHP49418 695 aa13.36□□□□□ -0.27
ABCF1-201ENST00000326195 RALBP1Q15311 655 aa13.35□□□□□ -0.27
ABCF1-201ENST00000326195 AMER1Q5JTC6 1135 aaPredicted RBP13.35□□□□□ -0.27
ABCF1-201ENST00000326195 TOM1O60784 492 aa13.35□□□□□ -0.27
ABCF1-201ENST00000326195 NEURL4Q96JN8 1562 aa13.35□□□□□ -0.27
ABCF1-201ENST00000326195 TTC21BQ7Z4L5 1316 aa13.35□□□□□ -0.27
ABCF1-201ENST00000326195 TULP4Q9NRJ4 1543 aa13.34□□□□□ -0.27
ABCF1-201ENST00000326195 IFT172Q9UG01 1749 aa13.34□□□□□ -0.27
ABCF1-201ENST00000326195 HMOX1P09601 288 aa13.34□□□□□ -0.27
ABCF1-201ENST00000326195 MED14O60244 1454 aa13.34□□□□□ -0.27
ABCF1-201ENST00000326195 RRP1P56182 461 aaKnown RBP13.33□□□□□ -0.27
ABCF1-201ENST00000326195 SETBP1Q9Y6X0 1596 aa13.33□□□□□ -0.28
ABCF1-201ENST00000326195 STRN4Q9NRL3 753 aa13.33□□□□□ -0.28
ABCF1-201ENST00000326195 RRP7AQ9Y3A4 280 aaKnown RBP13.33□□□□□ -0.28
ABCF1-201ENST00000326195 CSB-PGBD3P0DP91 1061 aa13.32□□□□□ -0.28
ABCF1-201ENST00000326195 PPP2R1AP30153 589 aa13.32□□□□□ -0.28
ABCF1-201ENST00000326195 USHBP1Q8N6Y0 703 aa13.32□□□□□ -0.28
ABCF1-201ENST00000326195 CERKQ8TCT0 537 aa13.32□□□□□ -0.28
ABCF1-201ENST00000326195 CCDC9Q9Y3X0 531 aaKnown RBP13.32□□□□□ -0.28
ABCF1-201ENST00000326195 U2AF1L5P0DN76 240 aaPredicted RBP13.32□□□□□ -0.28
ABCF1-201ENST00000326195 MS4A1P11836 297 aa13.32□□□□□ -0.28
ABCF1-201ENST00000326195 U2AF1Q01081 240 aaKnown RBP eCLIP13.32□□□□□ -0.28
ABCF1-201ENST00000326195 MYBBP1AQ9BQG0 1328 aaKnown RBP13.32□□□□□ -0.28
ABCF1-201ENST00000326195 WDR43Q15061 677 aaKnown RBP eCLIP13.32□□□□□ -0.28
ABCF1-201ENST00000326195 SIRT1Q96EB6 747 aa13.31□□□□□ -0.28
ABCF1-201ENST00000326195 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
ABCF1-201ENST00000326195 PIK3R4Q99570 1358 aa13.31□□□□□ -0.28
ABCF1-201ENST00000326195 FAM135BQ49AJ0 1406 aa13.31□□□□□ -0.28
ABCF1-201ENST00000326195 QRICH2Q9H0J4 1663 aa13.31□□□□□ -0.28
ABCF1-201ENST00000326195 HSP90AB2PQ58FF8 381 aa13.3□□□□□ -0.28
ABCF1-201ENST00000326195 NLRP13Q86W25 1043 aa13.3□□□□□ -0.28
ABCF1-201ENST00000326195 DDRGK1Q96HY6 314 aa13.3□□□□□ -0.28
ABCF1-201ENST00000326195 ADGRL3Q9HAR2 1447 aa13.3□□□□□ -0.28
ABCF1-201ENST00000326195 PLIN1O60240 522 aa13.29□□□□□ -0.28
ABCF1-201ENST00000326195 PNISRQ8TF01 805 aaKnown RBP13.29□□□□□ -0.28
ABCF1-201ENST00000326195 PLEKHG3A1L390 1219 aa13.29□□□□□ -0.28
ABCF1-201ENST00000326195 ANKRD36BQ8N2N9 1353 aa13.29□□□□□ -0.28
ABCF1-201ENST00000326195 STRCQ7RTU9 1775 aa13.28□□□□□ -0.28
ABCF1-201ENST00000326195 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.28□□□□□ -0.28
ABCF1-201ENST00000326195 NPHP3Q7Z494 1330 aa13.27□□□□□ -0.28
ABCF1-201ENST00000326195 GLIPR1L2Q4G1C9 344 aa13.27□□□□□ -0.28
ABCF1-201ENST00000326195 PRDM11Q9NQV5 511 aa13.27□□□□□ -0.28
ABCF1-201ENST00000326195 RCAN3Q9UKA8 241 aa13.27□□□□□ -0.28
ABCF1-201ENST00000326195 LRRC7Q96NW7 1537 aa13.27□□□□□ -0.29
ABCF1-201ENST00000326195 ARHGEF28Q8N1W1 1705 aaKnown RBP13.27□□□□□ -0.29
ABCF1-201ENST00000326195 LRRC59Q96AG4 307 aaKnown RBP13.26□□□□□ -0.29
ABCF1-201ENST00000326195 DAXXQ9UER7 740 aaPredicted RBP13.26□□□□□ -0.29
ABCF1-201ENST00000326195 ADAMTS8Q9UP79 889 aa13.26□□□□□ -0.29
ABCF1-201ENST00000326195 C1orf167Q5SNV9 1468 aa13.26□□□□□ -0.29
ABCF1-201ENST00000326195 GCP02774 474 aa13.26□□□□□ -0.29
ABCF1-201ENST00000326195 PTCH1Q13635 1447 aa13.26□□□□□ -0.29
ABCF1-201ENST00000326195 SBNO2Q9Y2G9 1366 aa13.26□□□□□ -0.29
ABCF1-201ENST00000326195 TECPR2O15040 1411 aa13.25□□□□□ -0.29
ABCF1-201ENST00000326195 HSPA1LP34931 641 aa13.25□□□□□ -0.29
ABCF1-201ENST00000326195 NLRP2Q9NX02 1062 aa13.25□□□□□ -0.29
ABCF1-201ENST00000326195 PODXL2Q9NZ53 605 aa13.25□□□□□ -0.29
ABCF1-201ENST00000326195 ZNF142P52746 1687 aaPredicted RBP13.25□□□□□ -0.29
ABCF1-201ENST00000326195 CFAP53Q96M91 514 aa13.25□□□□□ -0.29
ABCF1-201ENST00000326195 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
ABCF1-201ENST00000326195 ATP7BP35670 1465 aa13.24□□□□□ -0.29
ABCF1-201ENST00000326195 EVA1CP58658 441 aa13.24□□□□□ -0.29
ABCF1-201ENST00000326195 DIP2AQ14689 1571 aa13.24□□□□□ -0.29
ABCF1-201ENST00000326195 C8orf37Q96NL8 207 aa13.24□□□□□ -0.29
ABCF1-201ENST00000326195 ARXQ96QS3 562 aa13.24□□□□□ -0.29
ABCF1-201ENST00000326195 MEX3CQ5U5Q3 659 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms