RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 RRBP1Q9P2E9 1410 aaKnown RBP25.09■■□□□ 1.61
RNF40-201ENST00000324685 TCP11L2Q8N4U5 519 aa25.09■■□□□ 1.61
RNF40-201ENST00000324685 CDK5RAP3Q96JB5 506 aa25.09■■□□□ 1.61
RNF40-201ENST00000324685 DNAJC2Q99543 621 aaKnown RBP25.09■■□□□ 1.61
RNF40-201ENST00000324685 TTLL5Q6EMB2 1281 aa25.09■■□□□ 1.61
RNF40-201ENST00000324685 NLRP2Q9NX02 1062 aa25.09■■□□□ 1.61
RNF40-201ENST00000324685 PDE3AQ14432 1141 aa25.09■■□□□ 1.61
RNF40-201ENST00000324685 AEBP1Q8IUX7 1158 aa25.09■■□□□ 1.61
RNF40-201ENST00000324685 RUSC2Q8N2Y8 1516 aa25.09■■□□□ 1.61
RNF40-201ENST00000324685 FYCO1Q9BQS8 1478 aa25.09■■□□□ 1.61
RNF40-201ENST00000324685 MTHFSP49914 203 aa25.07■■□□□ 1.6
RNF40-201ENST00000324685 STK38Q15208 465 aa25.07■■□□□ 1.6
RNF40-201ENST00000324685 JMYQ8N9B5 988 aa25.07■■□□□ 1.6
RNF40-201ENST00000324685 MEX3CQ5U5Q3 659 aaKnown RBP25.07■■□□□ 1.6
RNF40-201ENST00000324685 SAMD1Q6SPF0 538 aaPredicted RBP25.07■■□□□ 1.6
RNF40-201ENST00000324685 GNAI2P04899 355 aa25.06■■□□□ 1.6
RNF40-201ENST00000324685 ANKRD50Q9ULJ7 1429 aa25.06■■□□□ 1.6
RNF40-201ENST00000324685 ATF3P18847 181 aa25.06■■□□□ 1.6
RNF40-201ENST00000324685 ATAD2BQ9ULI0 1458 aa25.06■■□□□ 1.6
RNF40-201ENST00000324685 WASHC2AQ641Q2 1341 aa25.06■■□□□ 1.6
RNF40-201ENST00000324685 ANKRD1Q15327 319 aa25.05■■□□□ 1.6
RNF40-201ENST00000324685 PPP2R1AP30153 589 aa25.05■■□□□ 1.6
RNF40-201ENST00000324685 DACH1Q9UI36 760 aa25.05■■□□□ 1.6
RNF40-201ENST00000324685 LEKR1Q6ZMV7 388 aa25.04■■□□□ 1.6
RNF40-201ENST00000324685 KIF6Q6ZMV9 814 aa25.04■■□□□ 1.6
RNF40-201ENST00000324685 KRI1Q8N9T8 703 aaKnown RBP25.04■■□□□ 1.6
RNF40-201ENST00000324685 BCL11BQ9C0K0 894 aaPredicted RBP25.04■■□□□ 1.6
RNF40-201ENST00000324685 TWISTNBQ3B726 338 aaPredicted RBP25.04■■□□□ 1.6
RNF40-201ENST00000324685 CCAR1Q8IX12 1150 aaKnown RBP25.04■■□□□ 1.6
RNF40-201ENST00000324685 EXOSC9Q06265 439 aaKnown RBP25.03■■□□□ 1.6
RNF40-201ENST00000324685 PLEKHO1Q53GL0 409 aaPredicted RBP25.03■■□□□ 1.6
RNF40-201ENST00000324685 CCDC192P0DO97 292 aa25.03■■□□□ 1.6
RNF40-201ENST00000324685 IKQ13123 557 aaPredicted RBP25.03■■□□□ 1.6
RNF40-201ENST00000324685 ZNHIT6Q9NWK9 470 aaKnown RBP25.03■■□□□ 1.6
RNF40-201ENST00000324685 FIBPO43427 364 aa25.03■■□□□ 1.6
RNF40-201ENST00000324685 NLRP6P59044 892 aa25.02■■□□□ 1.6
RNF40-201ENST00000324685 CYP46A1Q9Y6A2 500 aa25.02■■□□□ 1.6
RNF40-201ENST00000324685 SYCP1Q15431 976 aa25.02■■□□□ 1.6
RNF40-201ENST00000324685 KDM4AO75164 1064 aa25.01■■□□□ 1.6
RNF40-201ENST00000324685 ERLIN2O94905 339 aa25.01■■□□□ 1.59
RNF40-201ENST00000324685 TTC39AQ5SRH9 613 aa25.01■■□□□ 1.59
RNF40-201ENST00000324685 SMG6Q86US8 1419 aaKnown RBP25.01■■□□□ 1.59
RNF40-201ENST00000324685 CCDC158Q5M9N0 1113 aa25.01■■□□□ 1.59
RNF40-201ENST00000324685 TXLNBQ8N3L3 684 aa25.01■■□□□ 1.59
RNF40-201ENST00000324685 MTMR7Q9Y216 660 aa25.01■■□□□ 1.59
RNF40-201ENST00000324685 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.01■■□□□ 1.592e-6■□□□□ 10.9
RNF40-201ENST00000324685 FMNL2Q96PY5 1086 aa25.01■■□□□ 1.59
RNF40-201ENST00000324685 WDR33Q9C0J8 1336 aaKnown RBP25■■□□□ 1.59
RNF40-201ENST00000324685 ATP2B1P20020 1258 aa25■■□□□ 1.59
RNF40-201ENST00000324685 PRKAR2BP31323 418 aa25■■□□□ 1.59
RNF40-201ENST00000324685 CCT4P50991 539 aaKnown RBP24.99■■□□□ 1.59
RNF40-201ENST00000324685 LUC7LQ9NQ29 371 aaKnown RBP24.99■■□□□ 1.59
RNF40-201ENST00000324685 SMARCA4P51532 1647 aa24.99■■□□□ 1.59
RNF40-201ENST00000324685 GPRASP1Q5JY77 1395 aa24.99■■□□□ 1.59
RNF40-201ENST00000324685 CT47B1P0C2W7 299 aaPredicted RBP24.99■■□□□ 1.59
RNF40-201ENST00000324685 NOB1Q9ULX3 412 aaKnown RBP24.99■■□□□ 1.59
RNF40-201ENST00000324685 SERPINC1P01008 464 aa24.99■■□□□ 1.59
RNF40-201ENST00000324685 KRT18P05783 430 aaKnown RBP24.99■■□□□ 1.59
RNF40-201ENST00000324685 AXDND1Q5T1B0 1012 aaPredicted RBP24.98■■□□□ 1.59
RNF40-201ENST00000324685 LRRC9Q6ZRR7 1453 aa24.98■■□□□ 1.59
RNF40-201ENST00000324685 BRPF1P55201 1214 aaPredicted RBP24.98■■□□□ 1.59
RNF40-201ENST00000324685 CDCA7LQ96GN5 454 aa24.98■■□□□ 1.59
RNF40-201ENST00000324685 GAPVD1Q14C86 1478 aa24.98■■□□□ 1.59
RNF40-201ENST00000324685 K7ELQ4 463 aaPredicted RBP24.97■■□□□ 1.59
RNF40-201ENST00000324685 PPFIBP1Q86W92 1011 aa24.97■■□□□ 1.59
RNF40-201ENST00000324685 TNMDQ9H2S6 317 aa24.97■■□□□ 1.59
RNF40-201ENST00000324685 GNL3LQ9NVN8 582 aaKnown RBP24.97■■□□□ 1.59
RNF40-201ENST00000324685 CBFA2T2O43439 604 aa24.96■■□□□ 1.59
RNF40-201ENST00000324685 STIM1Q13586 685 aa24.96■■□□□ 1.59
RNF40-201ENST00000324685 LRRCC1Q9C099 1032 aa24.96■■□□□ 1.59
RNF40-201ENST00000324685 TSPYL1Q9H0U9 437 aa24.96■■□□□ 1.59
RNF40-201ENST00000324685 NUTM2GQ5VZR2 741 aa24.96■■□□□ 1.59
RNF40-201ENST00000324685 SPC24Q8NBT2 197 aa24.96■■□□□ 1.59
RNF40-201ENST00000324685 GOLGA6L10A6NI86 522 aa24.95■■□□□ 1.58
RNF40-201ENST00000324685 TRIM22Q8IYM9 498 aa24.95■■□□□ 1.58
RNF40-201ENST00000324685 C1orf115Q9H7X2 142 aa24.95■■□□□ 1.58
RNF40-201ENST00000324685 WWC2Q6AWC2 1192 aa24.95■■□□□ 1.58
RNF40-201ENST00000324685 TMEM132EQ6IEE7 984 aa24.94■■□□□ 1.58
RNF40-201ENST00000324685 KRT85P78386 507 aa24.94■■□□□ 1.58
RNF40-201ENST00000324685 PNISRQ8TF01 805 aaKnown RBP24.94■■□□□ 1.58
RNF40-201ENST00000324685 CEBPZQ03701 1054 aaKnown RBP24.94■■□□□ 1.58
RNF40-201ENST00000324685 ZRSR2Q15696 482 aaKnown RBP24.94■■□□□ 1.58
RNF40-201ENST00000324685 ZNF644Q9H582 1327 aaPredicted RBP24.94■■□□□ 1.58
RNF40-201ENST00000324685 TMEM132AQ24JP5 1023 aa24.93■■□□□ 1.58
RNF40-201ENST00000324685 SRCIN1Q9C0H9 1055 aa24.93■■□□□ 1.58
RNF40-201ENST00000324685 SKIDA1Q1XH10 827 aa24.93■■□□□ 1.58
RNF40-201ENST00000324685 NACAP1Q9BZK3 213 aa24.93■■□□□ 1.58
RNF40-201ENST00000324685 CNNM1Q9NRU3 951 aa24.93■■□□□ 1.58
RNF40-201ENST00000324685 PRDM2Q13029 1718 aa24.92■■□□□ 1.58
RNF40-201ENST00000324685 ERLIN1O75477 346 aa24.92■■□□□ 1.58
RNF40-201ENST00000324685 NCOA2Q15596 1464 aa24.92■■□□□ 1.58
RNF40-201ENST00000324685 CCDC112Q8NEF3 446 aa24.92■■□□□ 1.58
RNF40-201ENST00000324685 WDR63Q8IWG1 891 aa24.91■■□□□ 1.58
RNF40-201ENST00000324685 CCDC181Q5TID7 509 aa24.91■■□□□ 1.58
RNF40-201ENST00000324685 ABTB2Q8N961 1025 aa24.91■■□□□ 1.58
RNF40-201ENST00000324685 SLC4A2P04920 1241 aa24.9■■□□□ 1.58
RNF40-201ENST00000324685 ZSCAN25Q6NSZ9 544 aa24.9■■□□□ 1.58
RNF40-201ENST00000324685 FGD5Q6ZNL6 1462 aa24.9■■□□□ 1.58
RNF40-201ENST00000324685 IGF1RP08069 1367 aa24.9■■□□□ 1.58
RNF40-201ENST00000324685 ME1P48163 572 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 230.4 ms