RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 ZNF652Q9Y2D9 606 aa10.89□□□□□ -0.67
CD28-201ENST00000324106 R3HCC1Q9Y3T6 440 aaKnown RBP10.89□□□□□ -0.67
CD28-201ENST00000324106 NUDT16Q96DE0 195 aaKnown RBP10.89□□□□□ -0.67
CD28-201ENST00000324106 SLKQ9H2G2 1235 aaPredicted RBP10.89□□□□□ -0.67
CD28-201ENST00000324106 HOOK1Q9UJC3 728 aaKnown RBP10.89□□□□□ -0.67
CD28-201ENST00000324106 RIMBP3CA6NJZ7 1639 aa10.89□□□□□ -0.67
CD28-201ENST00000324106 RIMBP3BA6NNM3 1639 aa10.89□□□□□ -0.67
CD28-201ENST00000324106 RIMBP3Q9UFD9 1639 aa10.89□□□□□ -0.67
CD28-201ENST00000324106 PLIN1O60240 522 aa10.88□□□□□ -0.67
CD28-201ENST00000324106 WDHD1O75717 1129 aaPredicted RBP10.88□□□□□ -0.67
CD28-201ENST00000324106 TPM1P09493 284 aa10.88□□□□□ -0.67
CD28-201ENST00000324106 SLC12A5Q9H2X9 1139 aa10.88□□□□□ -0.67
CD28-201ENST00000324106 CNNM1Q9NRU3 951 aa10.88□□□□□ -0.67
CD28-201ENST00000324106 TCP11L2Q8N4U5 519 aa10.88□□□□□ -0.67
CD28-201ENST00000324106 CNKSR2Q8WXI2 1034 aa10.88□□□□□ -0.67
CD28-201ENST00000324106 BRD4O60885 1362 aaPredicted RBP10.88□□□□□ -0.67
CD28-201ENST00000324106 ZC3H6P61129 1189 aaKnown RBP10.88□□□□□ -0.67
CD28-201ENST00000324106 IKQ13123 557 aaPredicted RBP10.88□□□□□ -0.67
CD28-201ENST00000324106 PHF8Q9UPP1 1060 aa10.88□□□□□ -0.67
CD28-201ENST00000324106 RRP1P56182 461 aaKnown RBP10.88□□□□□ -0.67
CD28-201ENST00000324106 CREBRFQ8IUR6 639 aa10.88□□□□□ -0.67
CD28-201ENST00000324106 MPHOSPH8Q99549 860 aa10.88□□□□□ -0.67
CD28-201ENST00000324106 BRMS1Q9HCU9 246 aa10.88□□□□□ -0.67
CD28-201ENST00000324106 ANO2Q9NQ90 1003 aa10.88□□□□□ -0.67
CD28-201ENST00000324106 ANKRD20A12PQ8NF67 263 aa10.87□□□□□ -0.67
CD28-201ENST00000324106 HIP1O00291 1037 aa10.87□□□□□ -0.67
CD28-201ENST00000324106 MCTP1Q6DN14 999 aa10.87□□□□□ -0.67
CD28-201ENST00000324106 INTS3Q68E01 1043 aaKnown RBP10.87□□□□□ -0.67
CD28-201ENST00000324106 NINLQ9Y2I6 1382 aa10.87□□□□□ -0.67
CD28-201ENST00000324106 KRI1Q8N9T8 703 aaKnown RBP10.87□□□□□ -0.67
CD28-201ENST00000324106 PES1O00541 588 aaKnown RBP10.86□□□□□ -0.67
CD28-201ENST00000324106 CCDC158Q5M9N0 1113 aa10.86□□□□□ -0.67
CD28-201ENST00000324106 SAMD1Q6SPF0 538 aaPredicted RBP10.86□□□□□ -0.67
CD28-201ENST00000324106 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.86□□□□□ -0.67
CD28-201ENST00000324106 AMOTL2Q9Y2J4 779 aa10.86□□□□□ -0.67
CD28-201ENST00000324106 SURF6O75683 361 aaKnown RBP10.85□□□□□ -0.67
CD28-201ENST00000324106 CT47B1P0C2W7 299 aaPredicted RBP10.85□□□□□ -0.67
CD28-201ENST00000324106 TWISTNBQ3B726 338 aaPredicted RBP10.85□□□□□ -0.67
CD28-201ENST00000324106 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.85□□□□□ -0.67
CD28-201ENST00000324106 AMOTQ4VCS5 1084 aa10.85□□□□□ -0.67
CD28-201ENST00000324106 TMOD2Q9NZR1 351 aa10.85□□□□□ -0.67
CD28-201ENST00000324106 FAM161AQ3B820 660 aa10.84□□□□□ -0.67
CD28-201ENST00000324106 CCT4P50991 539 aaKnown RBP10.84□□□□□ -0.67
CD28-201ENST00000324106 CCDC57Q2TAC2 916 aa10.84□□□□□ -0.67
CD28-201ENST00000324106 CNTROBQ8N137 903 aa10.84□□□□□ -0.67
CD28-201ENST00000324106 NBPF1Q3BBV0 1214 aa10.84□□□□□ -0.67
CD28-201ENST00000324106 FYB1O15117 783 aa10.84□□□□□ -0.67
CD28-201ENST00000324106 FSD1Q9BTV5 496 aa10.84□□□□□ -0.67
CD28-201ENST00000324106 NACAP1Q9BZK3 213 aa10.84□□□□□ -0.67
CD28-201ENST00000324106 SRCIN1Q9C0H9 1055 aa10.84□□□□□ -0.67
CD28-201ENST00000324106 ADAMTS2O95450 1211 aa10.83□□□□□ -0.68
CD28-201ENST00000324106 PSMA5P28066 241 aa10.83□□□□□ -0.68
CD28-201ENST00000324106 PPP2R1AP30153 589 aa10.83□□□□□ -0.68
CD28-201ENST00000324106 ZNF428Q96B54 188 aa10.83□□□□□ -0.68
CD28-201ENST00000324106 TMOD3Q9NYL9 352 aa10.83□□□□□ -0.68
CD28-201ENST00000324106 BECN2A8MW95 431 aa10.83□□□□□ -0.68
CD28-201ENST00000324106 UBAP1LF5GYI3 381 aa10.83□□□□□ -0.68
CD28-201ENST00000324106 ZPR1O75312 459 aa10.83□□□□□ -0.68
CD28-201ENST00000324106 XPCQ01831 940 aaPredicted RBP10.83□□□□□ -0.68
CD28-201ENST00000324106 ARHGEF11O15085 1522 aa10.83□□□□□ -0.68
CD28-201ENST00000324106 IPO7O95373 1038 aaKnown RBP10.83□□□□□ -0.68
CD28-201ENST00000324106 ZSCAN25Q6NSZ9 544 aa10.83□□□□□ -0.68
CD28-201ENST00000324106 MSH6P52701 1360 aa10.83□□□□□ -0.68
CD28-201ENST00000324106 EXOC5O00471 708 aa10.83□□□□□ -0.68
CD28-201ENST00000324106 FCHSD2O94868 740 aa10.83□□□□□ -0.68
CD28-201ENST00000324106 GNAI2P04899 355 aa10.83□□□□□ -0.68
CD28-201ENST00000324106 CUL7Q14999 1698 aa10.83□□□□□ -0.68
CD28-201ENST00000324106 GOLGA6L19H0YKK7 550 aa10.82□□□□□ -0.68
CD28-201ENST00000324106 FOXO3O43524 673 aa10.82□□□□□ -0.68
CD28-201ENST00000324106 CRBNQ96SW2 442 aa10.82□□□□□ -0.68
CD28-201ENST00000324106 WWC2Q6AWC2 1192 aa10.82□□□□□ -0.68
CD28-201ENST00000324106 DDX11L8A8MPP1 907 aa10.81□□□□□ -0.68
CD28-201ENST00000324106 IGHMBP2P38935 993 aaKnown RBP10.81□□□□□ -0.68
CD28-201ENST00000324106 CEP126Q9P2H0 1117 aa10.81□□□□□ -0.68
CD28-201ENST00000324106 FANCAO15360 1455 aa10.81□□□□□ -0.68
CD28-201ENST00000324106 SUPT6HQ7KZ85 1726 aaKnown RBP10.81□□□□□ -0.68
CD28-201ENST00000324106 BTBD11A6QL63 1104 aa10.81□□□□□ -0.68
CD28-201ENST00000324106 CEBPAP49715 358 aaPredicted RBP10.81□□□□□ -0.68
CD28-201ENST00000324106 HSP90AB3PQ58FF7 597 aa10.81□□□□□ -0.68
CD28-201ENST00000324106 TNRQ92752 1358 aa10.81□□□□□ -0.68
CD28-201ENST00000324106 IDI1Q13907 227 aa10.81□□□□□ -0.68
CD28-201ENST00000324106 TTC39AQ5SRH9 613 aa10.81□□□□□ -0.68
CD28-201ENST00000324106 ADAMTS8Q9UP79 889 aa10.81□□□□□ -0.68
CD28-201ENST00000324106 SLC4A2P04920 1241 aa10.8□□□□□ -0.68
CD28-201ENST00000324106 KIF14Q15058 1648 aa10.8□□□□□ -0.68
CD28-201ENST00000324106 NAP1L5Q96NT1 182 aaPredicted RBP10.8□□□□□ -0.68
CD28-201ENST00000324106 SMC3Q9UQE7 1217 aa10.79□□□□□ -0.68
CD28-201ENST00000324106 GNAT3A8MTJ3 354 aa10.79□□□□□ -0.68
CD28-201ENST00000324106 TEX13AQ9BXU3 409 aaPredicted RBP10.79□□□□□ -0.68
CD28-201ENST00000324106 ADAMTS12P58397 1594 aa10.79□□□□□ -0.68
CD28-201ENST00000324106 RBM5P52756 815 aaKnown RBP eCLIP10.79□□□□□ -0.68
CD28-201ENST00000324106 KRT28Q7Z3Y7 464 aa10.79□□□□□ -0.68
CD28-201ENST00000324106 WDR63Q8IWG1 891 aa10.79□□□□□ -0.68
CD28-201ENST00000324106 LNPKQ9C0E8 428 aa10.78□□□□□ -0.68
CD28-201ENST00000324106 DHX29Q7Z478 1369 aaKnown RBP10.78□□□□□ -0.68
CD28-201ENST00000324106 WASLO00401 505 aaPredicted RBP10.78□□□□□ -0.68
CD28-201ENST00000324106 EXOSC9Q06265 439 aaKnown RBP10.78□□□□□ -0.68
CD28-201ENST00000324106 SKOR2Q2VWA4 1001 aaPredicted RBP10.78□□□□□ -0.68
CD28-201ENST00000324106 NPHP3Q7Z494 1330 aa10.78□□□□□ -0.68
CD28-201ENST00000324106 EXOC6Q8TAG9 804 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms