RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 TNS1Q9HBL0 1735 aaKnown RBP17.98■□□□□ 0.47
TPM3-204ENST00000323144 PIK3C2AO00443 1686 aa17.97■□□□□ 0.47
TPM3-204ENST00000323144 NBPF1Q3BBV0 1214 aa17.97■□□□□ 0.47
TPM3-204ENST00000323144 AKAP12Q02952 1782 aa17.96■□□□□ 0.47
TPM3-204ENST00000323144 POLR3AO14802 1390 aaPredicted RBP17.96■□□□□ 0.47
TPM3-204ENST00000323144 RGPD1P0DJD0 1748 aa17.95■□□□□ 0.46
TPM3-204ENST00000323144 VPS72Q15906 364 aa17.94■□□□□ 0.46
TPM3-204ENST00000323144 NGDNQ8NEJ9 315 aaKnown RBP17.94■□□□□ 0.46
TPM3-204ENST00000323144 NUDT16Q96DE0 195 aaKnown RBP17.94■□□□□ 0.46
TPM3-204ENST00000323144 WNK3Q9BYP7 1800 aa17.93■□□□□ 0.46
TPM3-204ENST00000323144 PPIP5K1Q6PFW1 1433 aa17.93■□□□□ 0.46
TPM3-204ENST00000323144 FAM83GA6ND36 823 aa17.92■□□□□ 0.46
TPM3-204ENST00000323144 CDK19Q9BWU1 502 aa17.92■□□□□ 0.46
TPM3-204ENST00000323144 PAK3O75914 559 aaPredicted RBP17.91■□□□□ 0.46
TPM3-204ENST00000323144 CCDC9Q9Y3X0 531 aaKnown RBP17.91■□□□□ 0.46
TPM3-204ENST00000323144 CENPJQ9HC77 1338 aaPredicted RBP17.91■□□□□ 0.46
TPM3-204ENST00000323144 KIAA0232Q92628 1395 aa17.91■□□□□ 0.46
TPM3-204ENST00000323144 BLMP54132 1417 aaPredicted RBP17.9■□□□□ 0.46
TPM3-204ENST00000323144 MON2Q7Z3U7 1717 aa17.9■□□□□ 0.46
TPM3-204ENST00000323144 SEPT12Q8IYM1 358 aa17.89■□□□□ 0.45
TPM3-204ENST00000323144 SIN3AQ96ST3 1273 aa17.89■□□□□ 0.45
TPM3-204ENST00000323144 BTG4Q9NY30 223 aa17.89■□□□□ 0.45
TPM3-204ENST00000323144 ACEP12821 1306 aa17.89■□□□□ 0.45
TPM3-204ENST00000323144 SLIT3O75094 1523 aa17.88■□□□□ 0.45
TPM3-204ENST00000323144 L3MBTL2Q969R5 705 aa17.88■□□□□ 0.45
TPM3-204ENST00000323144 NUTM2GQ5VZR2 741 aa17.87■□□□□ 0.45
TPM3-204ENST00000323144 CAMTA1Q9Y6Y1 1673 aa17.87■□□□□ 0.45
TPM3-204ENST00000323144 PRDM11Q9NQV5 511 aa17.86■□□□□ 0.45
TPM3-204ENST00000323144 USP6P35125 1406 aa17.86■□□□□ 0.45
TPM3-204ENST00000323144 LRRC37A3O60309 1634 aa17.85■□□□□ 0.45
TPM3-204ENST00000323144 USP19O94966 1318 aa17.85■□□□□ 0.45
TPM3-204ENST00000323144 FAM98CQ17RN3 349 aaKnown RBP17.85■□□□□ 0.45
TPM3-204ENST00000323144 PARP4Q9UKK3 1724 aaKnown RBP17.85■□□□□ 0.45
TPM3-204ENST00000323144 COL18A1P39060 1754 aa17.84■□□□□ 0.45
TPM3-204ENST00000323144 SSH2Q76I76 1423 aa17.84■□□□□ 0.45
TPM3-204ENST00000323144 ROCK2O75116 1388 aaKnown RBP17.84■□□□□ 0.45
TPM3-204ENST00000323144 A0A0G2JS52 829 aa17.84■□□□□ 0.45
TPM3-204ENST00000323144 SRPK2P78362 688 aaKnown RBP17.84■□□□□ 0.45
TPM3-204ENST00000323144 MYT1Q01538 1121 aa17.84■□□□□ 0.45
TPM3-204ENST00000323144 CHRNA2Q15822 529 aa17.84■□□□□ 0.45
TPM3-204ENST00000323144 CABP2Q9NPB3 220 aa17.84■□□□□ 0.45
TPM3-204ENST00000323144 RGPD5Q99666 1765 aa17.84■□□□□ 0.45
TPM3-204ENST00000323144 USP54Q70EL1 1684 aa17.83■□□□□ 0.45
TPM3-204ENST00000323144 SPATA31A5Q5VU36 1347 aa17.83■□□□□ 0.44
TPM3-204ENST00000323144 SPATA31A7Q8IWB4 1347 aa17.83■□□□□ 0.44
TPM3-204ENST00000323144 CCDC61Q9Y6R9 512 aa17.83■□□□□ 0.44
TPM3-204ENST00000323144 PLEKHG3A1L390 1219 aa17.82■□□□□ 0.44
TPM3-204ENST00000323144 NBPF8Q3BBV2 869 aa17.82■□□□□ 0.44
TPM3-204ENST00000323144 RREB1Q92766 1687 aa17.82■□□□□ 0.44
TPM3-204ENST00000323144 ONECUT3O60422 494 aaPredicted RBP17.81■□□□□ 0.44
TPM3-204ENST00000323144 NEUROD1Q13562 356 aa17.81■□□□□ 0.44
TPM3-204ENST00000323144 KRT27Q7Z3Y8 459 aa17.81■□□□□ 0.44
TPM3-204ENST00000323144 DEFB132Q7Z7B7 95 aa17.81■□□□□ 0.44
TPM3-204ENST00000323144 COL5A2P05997 1499 aaPredicted RBP17.81■□□□□ 0.44
TPM3-204ENST00000323144 LRP5O75197 1615 aa17.8■□□□□ 0.44
TPM3-204ENST00000323144 ZC3H6P61129 1189 aaKnown RBP17.8■□□□□ 0.44
TPM3-204ENST00000323144 CPDO75976 1380 aa17.79■□□□□ 0.44
TPM3-204ENST00000323144 NUP188Q5SRE5 1749 aa17.79■□□□□ 0.44
TPM3-204ENST00000323144 NFAT5O94916 1531 aa17.78■□□□□ 0.44
TPM3-204ENST00000323144 SPATA31A1Q5TZJ5 1347 aa17.78■□□□□ 0.44
TPM3-204ENST00000323144 FAM182BQ5T319 152 aa17.78■□□□□ 0.44
TPM3-204ENST00000323144 STRN4Q9NRL3 753 aa17.78■□□□□ 0.44
TPM3-204ENST00000323144 LTN1O94822 1766 aa17.78■□□□□ 0.44
TPM3-204ENST00000323144 PEAK1Q9H792 1746 aa17.78■□□□□ 0.44
TPM3-204ENST00000323144 CCDC125Q86Z20 511 aa17.77■□□□□ 0.44
TPM3-204ENST00000323144 ABTB2Q8N961 1025 aa17.76■□□□□ 0.43
TPM3-204ENST00000323144 SRCAPQ6ZRS2 3230 aa17.76■□□□□ 0.43
TPM3-204ENST00000323144 CPSF1Q10570 1443 aaKnown RBP17.74■□□□□ 0.43
TPM3-204ENST00000323144 CABP1Q9NZU7 370 aa17.74■□□□□ 0.43
TPM3-204ENST00000323144 BRD4O60885 1362 aaPredicted RBP17.74■□□□□ 0.43
TPM3-204ENST00000323144 SBF2Q86WG5 1849 aa17.74■□□□□ 0.43
TPM3-204ENST00000323144 CD163L1Q9NR16 1453 aa17.74■□□□□ 0.43
TPM3-204ENST00000323144 EVC2Q86UK5 1308 aa17.73■□□□□ 0.43
TPM3-204ENST00000323144 DISP2A7MBM2 1401 aa17.73■□□□□ 0.43
TPM3-204ENST00000323144 ZRANB1Q9UGI0 708 aa17.73■□□□□ 0.43
TPM3-204ENST00000323144 SBNO2Q9Y2G9 1366 aa17.72■□□□□ 0.43
TPM3-204ENST00000323144 SF3B2Q13435 895 aaKnown RBP17.71■□□□□ 0.43
TPM3-204ENST00000323144 LARP1Q6PKG0 1096 aaKnown RBP17.71■□□□□ 0.43
TPM3-204ENST00000323144 USP35Q9P2H5 1018 aa17.71■□□□□ 0.43
TPM3-204ENST00000323144 TONSLQ96HA7 1378 aa17.7■□□□□ 0.42
TPM3-204ENST00000323144 ABCC6O95255 1503 aa17.7■□□□□ 0.42
TPM3-204ENST00000323144 RGPD3A6NKT7 1758 aaPredicted RBP17.7■□□□□ 0.42
TPM3-204ENST00000323144 RGPD4Q7Z3J3 1758 aa17.7■□□□□ 0.42
TPM3-204ENST00000323144 ZBTB7CA1YPR0 619 aa17.69■□□□□ 0.42
TPM3-204ENST00000323144 GCP02774 474 aa17.69■□□□□ 0.42
TPM3-204ENST00000323144 NLRP13Q86W25 1043 aa17.69■□□□□ 0.42
TPM3-204ENST00000323144 CRB1P82279 1406 aa17.69■□□□□ 0.42
TPM3-204ENST00000323144 BAG6P46379 1132 aa17.67■□□□□ 0.42
TPM3-204ENST00000323144 AATKQ6ZMQ8 1374 aa17.66■□□□□ 0.42
TPM3-204ENST00000323144 NLRP6P59044 892 aa17.66■□□□□ 0.42
TPM3-204ENST00000323144 TTC21BQ7Z4L5 1316 aa17.66■□□□□ 0.42
TPM3-204ENST00000323144 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
TPM3-204ENST00000323144 BARGINQ6ZT62 677 aa17.65■□□□□ 0.42
TPM3-204ENST00000323144 MYOM1P52179 1685 aa17.64■□□□□ 0.42
TPM3-204ENST00000323144 PSDA5PKW4 1024 aaPredicted RBP17.64■□□□□ 0.41
TPM3-204ENST00000323144 EVA1CP58658 441 aa17.64■□□□□ 0.41
TPM3-204ENST00000323144 EN1Q05925 392 aaPredicted RBP17.64■□□□□ 0.41
TPM3-204ENST00000323144 CARD11Q9BXL7 1154 aa17.64■□□□□ 0.41
TPM3-204ENST00000323144 SOX12O15370 315 aa17.63■□□□□ 0.41
TPM3-204ENST00000323144 TCP11L2Q8N4U5 519 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms