RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 CABP1Q9NZU7 370 aa14.94□□□□□ -0.02
CACNA1F-201ENST00000323022 SNAPC4Q5SXM2 1469 aa14.93□□□□□ -0.02
CACNA1F-201ENST00000323022 APAF1O14727 1248 aa14.93□□□□□ -0.02
CACNA1F-201ENST00000323022 BRMS1Q9HCU9 246 aa14.93□□□□□ -0.02
CACNA1F-201ENST00000323022 POLA1P09884 1462 aaPredicted RBP14.93□□□□□ -0.02
CACNA1F-201ENST00000323022 FGD6Q6ZV73 1430 aa14.93□□□□□ -0.02
CACNA1F-201ENST00000323022 VTI1AQ96AJ9 217 aa14.93□□□□□ -0.02
CACNA1F-201ENST00000323022 SIL1Q9H173 461 aa14.93□□□□□ -0.02
CACNA1F-201ENST00000323022 SAFBQ15424 915 aaKnown RBP eCLIP14.93□□□□□ -0.02
CACNA1F-201ENST00000323022 CCDC158Q5M9N0 1113 aa14.92□□□□□ -0.02
CACNA1F-201ENST00000323022 MATR3P43243 847 aaKnown RBP eCLIP14.92□□□□□ -0.02
CACNA1F-201ENST00000323022 BEGAINQ9BUH8 593 aa14.92□□□□□ -0.02
CACNA1F-201ENST00000323022 CASKIN1Q8WXD9 1431 aa14.92□□□□□ -0.02
CACNA1F-201ENST00000323022 GNAI1P63096 354 aa14.92□□□□□ -0.02
CACNA1F-201ENST00000323022 IGHMBP2P38935 993 aaKnown RBP14.92□□□□□ -0.02
CACNA1F-201ENST00000323022 EPS15P42566 896 aa14.91□□□□□ -0.02
CACNA1F-201ENST00000323022 RAI14Q9P0K7 980 aa14.91□□□□□ -0.02
CACNA1F-201ENST00000323022 RFC4P35249 363 aa14.91□□□□□ -0.02
CACNA1F-201ENST00000323022 CCDC57Q2TAC2 916 aa14.91□□□□□ -0.02
CACNA1F-201ENST00000323022 CCDC30Q5VVM6 783 aa14.91□□□□□ -0.02
CACNA1F-201ENST00000323022 CRACR2BQ8N4Y2 399 aaPredicted RBP14.91□□□□□ -0.02
CACNA1F-201ENST00000323022 ACSBG1Q96GR2 724 aa14.91□□□□□ -0.02
CACNA1F-201ENST00000323022 LMTK3Q96Q04 1460 aa14.9□□□□□ -0.02
CACNA1F-201ENST00000323022 BIN2Q9UBW5 565 aaPredicted RBP14.9□□□□□ -0.02
CACNA1F-201ENST00000323022 TOP2BQ02880 1626 aa14.9□□□□□ -0.02
CACNA1F-201ENST00000323022 SART3Q15020 963 aaKnown RBP14.9□□□□□ -0.02
CACNA1F-201ENST00000323022 RNF20Q5VTR2 975 aa14.9□□□□□ -0.02
CACNA1F-201ENST00000323022 API5Q9BZZ5 524 aaKnown RBP14.9□□□□□ -0.02
CACNA1F-201ENST00000323022 LRRC9Q6ZRR7 1453 aa14.9□□□□□ -0.02
CACNA1F-201ENST00000323022 ERC2O15083 957 aa14.9□□□□□ -0.02
CACNA1F-201ENST00000323022 KRT18P05783 430 aaKnown RBP14.9□□□□□ -0.02
CACNA1F-201ENST00000323022 ATP2B1P20020 1258 aa14.9□□□□□ -0.02
CACNA1F-201ENST00000323022 SULT6B1Q6IMI4 303 aa14.9□□□□□ -0.02
CACNA1F-201ENST00000323022 ERICH3Q5RHP9 1530 aa14.9□□□□□ -0.02
CACNA1F-201ENST00000323022 FSD1Q9BTV5 496 aa14.9□□□□□ -0.02
CACNA1F-201ENST00000323022 C6orf229H3BNL8 230 aa14.89□□□□□ -0.03
CACNA1F-201ENST00000323022 HSP90AB4PQ58FF6 505 aa14.89□□□□□ -0.03
CACNA1F-201ENST00000323022 CDK5RAP3Q96JB5 506 aa14.89□□□□□ -0.03
CACNA1F-201ENST00000323022 RTEL1-TNFRSF6BF6WH68 1400 aa14.89□□□□□ -0.03
CACNA1F-201ENST00000323022 DNMBPQ6XZF7 1577 aa14.89□□□□□ -0.03
CACNA1F-201ENST00000323022 BTBD11A6QL63 1104 aa14.89□□□□□ -0.03
CACNA1F-201ENST00000323022 RRS1Q15050 365 aaKnown RBP14.89□□□□□ -0.03
CACNA1F-201ENST00000323022 BICRAQ9NZM4 1560 aa14.89□□□□□ -0.03
CACNA1F-201ENST00000323022 FAM161AQ3B820 660 aa14.88□□□□□ -0.03
CACNA1F-201ENST00000323022 NCOA2Q15596 1464 aa14.88□□□□□ -0.03
CACNA1F-201ENST00000323022 FYCO1Q9BQS8 1478 aa14.88□□□□□ -0.03
CACNA1F-201ENST00000323022 PHLDB1Q86UU1 1377 aa14.88□□□□□ -0.03
CACNA1F-201ENST00000323022 TPM1P09493 284 aa14.87□□□□□ -0.03
CACNA1F-201ENST00000323022 XBP1P17861 261 aa14.87□□□□□ -0.03
CACNA1F-201ENST00000323022 USHBP1Q8N6Y0 703 aa14.87□□□□□ -0.03
CACNA1F-201ENST00000323022 ZHX3Q9H4I2 956 aa14.86□□□□□ -0.03
CACNA1F-201ENST00000323022 COG6Q9Y2V7 657 aa14.86□□□□□ -0.03
CACNA1F-201ENST00000323022 MYBBP1AQ9BQG0 1328 aaKnown RBP14.86□□□□□ -0.03
CACNA1F-201ENST00000323022 HDGFL1Q5TGJ6 251 aa14.86□□□□□ -0.03
CACNA1F-201ENST00000323022 CRBNQ96SW2 442 aa14.86□□□□□ -0.03
CACNA1F-201ENST00000323022 ZNF76P36508 570 aa14.86□□□□□ -0.03
CACNA1F-201ENST00000323022 CD109Q6YHK3 1445 aa14.86□□□□□ -0.03
CACNA1F-201ENST00000323022 ZNF692Q9BU19 519 aaPredicted RBP14.86□□□□□ -0.03
CACNA1F-201ENST00000323022 USP5P45974 858 aa14.86□□□□□ -0.03
CACNA1F-201ENST00000323022 TFCP2L1Q9NZI6 479 aa14.85□□□□□ -0.03
CACNA1F-201ENST00000323022 ABCF2Q9UG63 623 aa14.85□□□□□ -0.03
CACNA1F-201ENST00000323022 MSH6P52701 1360 aa14.85□□□□□ -0.03
CACNA1F-201ENST00000323022 KRT28Q7Z3Y7 464 aa14.85□□□□□ -0.03
CACNA1F-201ENST00000323022 NAP1L1P55209 391 aaKnown RBP14.85□□□□□ -0.03
CACNA1F-201ENST00000323022 PIBF1Q8WXW3 757 aa14.85□□□□□ -0.03
CACNA1F-201ENST00000323022 GOLGA6L3A6NEY3 463 aa14.85□□□□□ -0.03
CACNA1F-201ENST00000323022 PRKAR2BP31323 418 aa14.85□□□□□ -0.03
CACNA1F-201ENST00000323022 E9PSI1 815 aa14.85□□□□□ -0.03
CACNA1F-201ENST00000323022 FKBP4Q02790 459 aaKnown RBP eCLIP14.85□□□□□ -0.03
CACNA1F-201ENST00000323022 SLC52A1Q9NWF4 448 aa14.85□□□□□ -0.03
CACNA1F-201ENST00000323022 LRP2BPQ9P2M1 347 aa14.85□□□□□ -0.03
CACNA1F-201ENST00000323022 CHRNA2Q15822 529 aa14.84□□□□□ -0.03
CACNA1F-201ENST00000323022 ROCK1Q13464 1354 aa14.84□□□□□ -0.03
CACNA1F-201ENST00000323022 USP47Q96K76 1375 aa14.84□□□□□ -0.03
CACNA1F-201ENST00000323022 SURF6O75683 361 aaKnown RBP14.84□□□□□ -0.03
CACNA1F-201ENST00000323022 ANKRD20A12PQ8NF67 263 aa14.84□□□□□ -0.03
CACNA1F-201ENST00000323022 AMOTL2Q9Y2J4 779 aa14.84□□□□□ -0.03
CACNA1F-201ENST00000323022 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.84□□□□□ -0.03
CACNA1F-201ENST00000323022 RBM26Q5T8P6 1007 aaKnown RBP14.83□□□□□ -0.03
CACNA1F-201ENST00000323022 RUNDC1Q96C34 613 aa14.83□□□□□ -0.03
CACNA1F-201ENST00000323022 ZNF408Q9H9D4 720 aa14.83□□□□□ -0.03
CACNA1F-201ENST00000323022 KCNH5Q8NCM2 988 aa14.83□□□□□ -0.04
CACNA1F-201ENST00000323022 WAPLQ7Z5K2 1190 aa14.83□□□□□ -0.04
CACNA1F-201ENST00000323022 CCAR2Q8N163 923 aaKnown RBP14.83□□□□□ -0.04
CACNA1F-201ENST00000323022 SETQ01105 290 aaPredicted RBP14.82□□□□□ -0.04
CACNA1F-201ENST00000323022 CCDC70Q6NSX1 233 aa14.82□□□□□ -0.04
CACNA1F-201ENST00000323022 ANKRD50Q9ULJ7 1429 aa14.82□□□□□ -0.04
CACNA1F-201ENST00000323022 ARAP1Q96P48 1450 aa14.82□□□□□ -0.04
CACNA1F-201ENST00000323022 LAMC3Q9Y6N6 1575 aa14.82□□□□□ -0.04
CACNA1F-201ENST00000323022 ST5P78524 1137 aa14.82□□□□□ -0.04
CACNA1F-201ENST00000323022 LRPPRCP42704 1394 aaKnown RBP14.82□□□□□ -0.04
CACNA1F-201ENST00000323022 BECN2A8MW95 431 aa14.82□□□□□ -0.04
CACNA1F-201ENST00000323022 GPR162Q16538 588 aa14.82□□□□□ -0.04
CACNA1F-201ENST00000323022 NUP133Q8WUM0 1156 aa14.82□□□□□ -0.04
CACNA1F-201ENST00000323022 EFCAB5A4FU69 1503 aa14.81□□□□□ -0.04
CACNA1F-201ENST00000323022 FBXO31Q5XUX0 539 aaPredicted RBP14.81□□□□□ -0.04
CACNA1F-201ENST00000323022 POLR3DP05423 398 aaPredicted RBP14.8□□□□□ -0.04
CACNA1F-201ENST00000323022 SOGA3Q5TF21 947 aa14.8□□□□□ -0.04
CACNA1F-201ENST00000323022 NACAP1Q9BZK3 213 aa14.8□□□□□ -0.04
CACNA1F-201ENST00000323022 PHF8Q9UPP1 1060 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms