RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 SASS6Q6UVJ0 657 aa11.55□□□□□ -0.56
COL12A1-201ENST00000322507 R3HCC1Q9Y3T6 440 aaKnown RBP11.55□□□□□ -0.56
COL12A1-201ENST00000322507 CCDC146Q8IYE0 955 aa11.55□□□□□ -0.56
COL12A1-201ENST00000322507 RBM33Q96EV2 1170 aaKnown RBP11.55□□□□□ -0.56
COL12A1-201ENST00000322507 BRD4O60885 1362 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-201ENST00000322507 IFIT2P09913 472 aaKnown RBP11.55□□□□□ -0.56
COL12A1-201ENST00000322507 ZMAT2Q96NC0 199 aaKnown RBP11.54□□□□□ -0.56
COL12A1-201ENST00000322507 TICAM2Q86XR7 235 aa11.54□□□□□ -0.56
COL12A1-201ENST00000322507 ZMYND15Q9H091 742 aa11.54□□□□□ -0.56
COL12A1-201ENST00000322507 NASPP49321 788 aaPredicted RBP11.54□□□□□ -0.56
COL12A1-201ENST00000322507 PRKRIP1Q9H875 184 aaPredicted RBP11.54□□□□□ -0.56
COL12A1-201ENST00000322507 MLECQ14165 292 aa11.54□□□□□ -0.56
COL12A1-201ENST00000322507 LUC7LQ9NQ29 371 aaKnown RBP11.54□□□□□ -0.56
COL12A1-201ENST00000322507 CCDC43Q96MW1 224 aaKnown RBP11.53□□□□□ -0.56
COL12A1-201ENST00000322507 SH2D4BQ5SQS7 431 aa11.53□□□□□ -0.56
COL12A1-201ENST00000322507 OLFM4Q6UX06 510 aa11.53□□□□□ -0.56
COL12A1-201ENST00000322507 DZIP1LQ8IYY4 767 aaKnown RBP11.53□□□□□ -0.56
COL12A1-201ENST00000322507 RILPL2Q969X0 211 aa11.53□□□□□ -0.56
COL12A1-201ENST00000322507 CENPHQ9H3R5 247 aa11.53□□□□□ -0.56
COL12A1-201ENST00000322507 TRHP20396 242 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-201ENST00000322507 IPO4Q8TEX9 1081 aaKnown RBP11.53□□□□□ -0.56
COL12A1-201ENST00000322507 RUNDC1Q96C34 613 aa11.53□□□□□ -0.56
COL12A1-201ENST00000322507 EHBP1L1Q8N3D4 1523 aa11.53□□□□□ -0.56
COL12A1-201ENST00000322507 G3BP1Q13283 466 aaKnown RBP eCLIP11.52□□□□□ -0.56
COL12A1-201ENST00000322507 DHX57Q6P158 1386 aaKnown RBP11.52□□□□□ -0.56
COL12A1-201ENST00000322507 KANK4Q5T7N3 995 aaPredicted RBP11.52□□□□□ -0.56
COL12A1-201ENST00000322507 MCTP1Q6DN14 999 aa11.52□□□□□ -0.56
COL12A1-201ENST00000322507 SART3Q15020 963 aaKnown RBP11.52□□□□□ -0.57
COL12A1-201ENST00000322507 WDR78Q5VTH9 848 aa11.52□□□□□ -0.57
COL12A1-201ENST00000322507 FANCD2Q9BXW9 1451 aa11.52□□□□□ -0.57
COL12A1-201ENST00000322507 IL27Q8NEV9 243 aa11.52□□□□□ -0.57
COL12A1-201ENST00000322507 CTDP1Q9Y5B0 961 aaPredicted RBP11.52□□□□□ -0.57
COL12A1-201ENST00000322507 GIGYF2Q6Y7W6 1299 aaKnown RBP11.51□□□□□ -0.57
COL12A1-201ENST00000322507 PANK3Q9H999 370 aa11.51□□□□□ -0.57
COL12A1-201ENST00000322507 TNNT1P13805 278 aa11.51□□□□□ -0.57
COL12A1-201ENST00000322507 CGNQ9P2M7 1197 aaKnown RBP11.51□□□□□ -0.57
COL12A1-201ENST00000322507 VPS37DQ86XT2 251 aa11.51□□□□□ -0.57
COL12A1-201ENST00000322507 RALYLQ86SE5 291 aaKnown RBP11.51□□□□□ -0.57
COL12A1-201ENST00000322507 ST20-MTHFSA0A0A6YYL1 179 aa11.51□□□□□ -0.57
COL12A1-201ENST00000322507 SMG6Q86US8 1419 aaKnown RBP11.51□□□□□ -0.57
COL12A1-201ENST00000322507 GAPVD1Q14C86 1478 aa11.51□□□□□ -0.57
COL12A1-201ENST00000322507 SMC3Q9UQE7 1217 aa11.51□□□□□ -0.57
COL12A1-201ENST00000322507 MCM3P25205 808 aa11.51□□□□□ -0.57
COL12A1-201ENST00000322507 EPS15P42566 896 aa11.51□□□□□ -0.57
COL12A1-201ENST00000322507 ZNF622Q969S3 477 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL12A1-201ENST00000322507 UQCRHLA0A096LP55 91 aa11.5□□□□□ -0.57
COL12A1-201ENST00000322507 UQCRHP07919 91 aa11.5□□□□□ -0.57
COL12A1-201ENST00000322507 ARID4AP29374 1257 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-201ENST00000322507 ODF2Q5BJF6 829 aa11.5□□□□□ -0.57
COL12A1-201ENST00000322507 DIAPH1O60610 1272 aaKnown RBP11.5□□□□□ -0.57
COL12A1-201ENST00000322507 FGD6Q6ZV73 1430 aa11.5□□□□□ -0.57
COL12A1-201ENST00000322507 JMYQ8N9B5 988 aa11.5□□□□□ -0.57
COL12A1-201ENST00000322507 PCMTD1Q96MG8 357 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-201ENST00000322507 ERC1Q8IUD2 1116 aa11.5□□□□□ -0.57
COL12A1-201ENST00000322507 SMARCE1Q969G3 411 aa11.5□□□□□ -0.57
COL12A1-201ENST00000322507 BICD2Q8TD16 824 aa11.5□□□□□ -0.57
COL12A1-201ENST00000322507 HFM1A2PYH4 1435 aa11.5□□□□□ -0.57
COL12A1-201ENST00000322507 DNAAF4Q8WXU2 420 aa11.49□□□□□ -0.57
COL12A1-201ENST00000322507 LRRCC1Q9C099 1032 aa11.49□□□□□ -0.57
COL12A1-201ENST00000322507 SEPT7Q16181 437 aaKnown RBP11.49□□□□□ -0.57
COL12A1-201ENST00000322507 IVLP07476 585 aa11.49□□□□□ -0.57
COL12A1-201ENST00000322507 SLC3A2P08195 630 aaKnown RBP11.49□□□□□ -0.57
COL12A1-201ENST00000322507 TXLNAP40222 546 aa11.49□□□□□ -0.57
COL12A1-201ENST00000322507 MNAT1P51948 309 aa11.49□□□□□ -0.57
COL12A1-201ENST00000322507 MAP3K7CLP57077 242 aa11.49□□□□□ -0.57
COL12A1-201ENST00000322507 CLUAP1Q96AJ1 413 aa11.49□□□□□ -0.57
COL12A1-201ENST00000322507 ATAD2BQ9ULI0 1458 aa11.49□□□□□ -0.57
COL12A1-201ENST00000322507 FOXD1Q16676 465 aa11.49□□□□□ -0.57
COL12A1-201ENST00000322507 PTPRGP23470 1445 aa11.49□□□□□ -0.57
COL12A1-201ENST00000322507 STAMBPO95630 424 aa11.48□□□□□ -0.57
COL12A1-201ENST00000322507 ANO2Q9NQ90 1003 aa11.48□□□□□ -0.57
COL12A1-201ENST00000322507 DNAJC21Q5F1R6 531 aaKnown RBP11.48□□□□□ -0.57
COL12A1-201ENST00000322507 ANKRD1Q15327 319 aa11.48□□□□□ -0.57
COL12A1-201ENST00000322507 PPFIBP2Q8ND30 876 aa11.48□□□□□ -0.57
COL12A1-201ENST00000322507 ERICH4A6NGS2 130 aa11.48□□□□□ -0.57
COL12A1-201ENST00000322507 TDRD9Q8NDG6 1382 aaKnown RBP11.48□□□□□ -0.57
COL12A1-201ENST00000322507 PRPF40AO75400 957 aaKnown RBP11.48□□□□□ -0.57
COL12A1-201ENST00000322507 RBM25P49756 843 aaKnown RBP11.48□□□□□ -0.57
COL12A1-201ENST00000322507 KIF2AO00139 706 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-201ENST00000322507 CNTROBQ8N137 903 aa11.47□□□□□ -0.57
COL12A1-201ENST00000322507 CASKIN1Q8WXD9 1431 aa11.47□□□□□ -0.57
COL12A1-201ENST00000322507 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL12A1-201ENST00000322507 GTPBP4Q9BZE4 634 aaKnown RBP11.47□□□□□ -0.57
COL12A1-201ENST00000322507 CDC45O75419 566 aa11.47□□□□□ -0.57
COL12A1-201ENST00000322507 MAP9Q49MG5 647 aa11.47□□□□□ -0.57
COL12A1-201ENST00000322507 DDX46Q7L014 1031 aaKnown RBP11.47□□□□□ -0.57
COL12A1-201ENST00000322507 DAPK1P53355 1430 aa11.47□□□□□ -0.57
COL12A1-201ENST00000322507 GBP3Q9H0R5 595 aa11.47□□□□□ -0.57
COL12A1-201ENST00000322507 ZNF428Q96B54 188 aa11.47□□□□□ -0.57
COL12A1-201ENST00000322507 ZFYP08048 801 aaPredicted RBP11.46□□□□□ -0.57
COL12A1-201ENST00000322507 NFXL1Q6ZNB6 911 aa11.46□□□□□ -0.57
COL12A1-201ENST00000322507 CWC22Q9HCG8 908 aaKnown RBP11.46□□□□□ -0.57
COL12A1-201ENST00000322507 CUL7Q14999 1698 aa11.46□□□□□ -0.57
COL12A1-201ENST00000322507 JPH4Q96JJ6 628 aa11.46□□□□□ -0.58
COL12A1-201ENST00000322507 KINO60870 393 aaKnown RBP11.46□□□□□ -0.58
COL12A1-201ENST00000322507 DACH1Q9UI36 760 aa11.46□□□□□ -0.58
COL12A1-201ENST00000322507 LRRC9Q6ZRR7 1453 aa11.45□□□□□ -0.58
COL12A1-201ENST00000322507 GNAI3P08754 354 aa11.45□□□□□ -0.58
COL12A1-201ENST00000322507 ZNF396Q96N95 335 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-201ENST00000322507 EVA1CP58658 441 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms