RNA–Protein interactions for RNA: ENST00000319242.7

GFRA4-202, Transcript of GDNF family receptor alpha 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene GFRA4, Length 900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-202ENST00000319242 USP21Q9UK80 565 aa37.86■■■■□ 3.65
GFRA4-202ENST00000319242 MARF1Q9Y4F3 1742 aaKnown RBP37.84■■■■□ 3.65
GFRA4-202ENST00000319242 RXRBP28702 533 aa37.83■■■■□ 3.65
GFRA4-202ENST00000319242 ST20-MTHFSA0A0A6YYL1 179 aa37.79■■■■□ 3.64
GFRA4-202ENST00000319242 ATAD2Q6PL18 1390 aa37.79■■■■□ 3.64
GFRA4-202ENST00000319242 ABCA3Q99758 1704 aa37.78■■■■□ 3.64
GFRA4-202ENST00000319242 TRPC5Q9UL62 973 aaPredicted RBP37.75■■■■□ 3.63
GFRA4-202ENST00000319242 BCL9LQ86UU0 1499 aa37.75■■■■□ 3.63
GFRA4-202ENST00000319242 RBM6P78332 1123 aaKnown RBP37.74■■■■□ 3.63
GFRA4-202ENST00000319242 NUTM2GQ5VZR2 741 aa37.74■■■■□ 3.63
GFRA4-202ENST00000319242 TESK2Q96S53 571 aa37.74■■■■□ 3.63
GFRA4-202ENST00000319242 ABTB2Q8N961 1025 aa37.73■■■■□ 3.63
GFRA4-202ENST00000319242 BRD4O60885 1362 aaPredicted RBP37.72■■■■□ 3.63
GFRA4-202ENST00000319242 SLIT2O94813 1529 aa37.71■■■■□ 3.63
GFRA4-202ENST00000319242 USP6P35125 1406 aa37.71■■■■□ 3.63
GFRA4-202ENST00000319242 USP47Q96K76 1375 aa37.7■■■■□ 3.63
GFRA4-202ENST00000319242 ATRNO75882 1429 aa37.7■■■■□ 3.62
GFRA4-202ENST00000319242 FAM83GA6ND36 823 aa37.69■■■■□ 3.62
GFRA4-202ENST00000319242 UNC5CLQ8IV45 518 aa37.69■■■■□ 3.62
GFRA4-202ENST00000319242 ZNF692Q9BU19 519 aaPredicted RBP37.69■■■■□ 3.62
GFRA4-202ENST00000319242 SLC24A1O60721 1099 aa37.67■■■■□ 3.62
GFRA4-202ENST00000319242 CRYBG1Q9Y4K1 1723 aa37.67■■■■□ 3.62
GFRA4-202ENST00000319242 CDK12Q9NYV4 1490 aaPredicted RBP37.66■■■■□ 3.62
GFRA4-202ENST00000319242 PUS7Q96PZ0 661 aaKnown RBP37.66■■■■□ 3.62
GFRA4-202ENST00000319242 SSH2Q76I76 1423 aa37.64■■■■□ 3.62
GFRA4-202ENST00000319242 NLRP13Q86W25 1043 aa37.63■■■■□ 3.61
GFRA4-202ENST00000319242 CPSF1Q10570 1443 aaKnown RBP37.62■■■■□ 3.61
GFRA4-202ENST00000319242 TMC1Q8TDI8 760 aa37.62■■■■□ 3.61
GFRA4-202ENST00000319242 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.6■■■■□ 3.61
GFRA4-202ENST00000319242 GJD4Q96KN9 370 aaPredicted RBP37.59■■■■□ 3.61
GFRA4-202ENST00000319242 SLC12A5Q9H2X9 1139 aa37.59■■■■□ 3.61
GFRA4-202ENST00000319242 AKAP12Q02952 1782 aa37.59■■■■□ 3.61
GFRA4-202ENST00000319242 USP19O94966 1318 aa37.59■■■■□ 3.61
GFRA4-202ENST00000319242 PLCH1Q4KWH8 1693 aa37.58■■■■□ 3.61
GFRA4-202ENST00000319242 UPF1Q92900 1129 aaKnown RBP eCLIP37.58■■■■□ 3.61
GFRA4-202ENST00000319242 PRDM11Q9NQV5 511 aa37.58■■■■□ 3.61
GFRA4-202ENST00000319242 TTC21BQ7Z4L5 1316 aa37.58■■■■□ 3.61
GFRA4-202ENST00000319242 PHRF1Q9P1Y6 1649 aaKnown RBP37.58■■■■□ 3.61
GFRA4-202ENST00000319242 KTN1Q86UP2 1357 aaKnown RBP37.57■■■■□ 3.61
GFRA4-202ENST00000319242 RGS12O14924 1447 aa37.57■■■■□ 3.6
GFRA4-202ENST00000319242 NLRP6P59044 892 aa37.57■■■■□ 3.6
GFRA4-202ENST00000319242 ZC3H6P61129 1189 aaKnown RBP37.57■■■■□ 3.6
GFRA4-202ENST00000319242 NWD2Q9ULI1 1742 aa37.56■■■■□ 3.6
GFRA4-202ENST00000319242 BTG4Q9NY30 223 aa37.56■■■■□ 3.6
GFRA4-202ENST00000319242 KIAA0232Q92628 1395 aa37.55■■■■□ 3.6
GFRA4-202ENST00000319242 TMF1P82094 1093 aa37.55■■■■□ 3.6
GFRA4-202ENST00000319242 COL14A1Q05707 1796 aaKnown RBP37.55■■■■□ 3.6
GFRA4-202ENST00000319242 VPS72Q15906 364 aa37.53■■■■□ 3.6
GFRA4-202ENST00000319242 TTC21AQ8NDW8 1320 aa37.53■■■■□ 3.6
GFRA4-202ENST00000319242 CD163L1Q9NR16 1453 aa37.52■■■■□ 3.6
GFRA4-202ENST00000319242 GCP02774 474 aa37.52■■■■□ 3.6
GFRA4-202ENST00000319242 HDGFL2Q7Z4V5 671 aaPredicted RBP37.52■■■■□ 3.6
GFRA4-202ENST00000319242 CHRNA2Q15822 529 aa37.51■■■■□ 3.6
GFRA4-202ENST00000319242 TERF2IPQ9NYB0 399 aa37.49■■■■□ 3.59
GFRA4-202ENST00000319242 CCDC9Q9Y3X0 531 aaKnown RBP37.49■■■■□ 3.59
GFRA4-202ENST00000319242 NRKQ7Z2Y5 1582 aa37.49■■■■□ 3.59
GFRA4-202ENST00000319242 PIK3C2AO00443 1686 aa37.48■■■■□ 3.59
GFRA4-202ENST00000319242 MON2Q7Z3U7 1717 aa37.47■■■■□ 3.59
GFRA4-202ENST00000319242 NINLQ9Y2I6 1382 aa37.46■■■■□ 3.59
GFRA4-202ENST00000319242 GLI3P10071 1580 aa37.46■■■■□ 3.59
GFRA4-202ENST00000319242 CPDO75976 1380 aa37.45■■■■□ 3.59
GFRA4-202ENST00000319242 NRAPQ86VF7 1730 aa37.45■■■■□ 3.59
GFRA4-202ENST00000319242 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.45■■■■□ 3.59
GFRA4-202ENST00000319242 A0A1W2PP64 1363 aa37.43■■■■□ 3.58
GFRA4-202ENST00000319242 SLIT3O75094 1523 aa37.42■■■■□ 3.58
GFRA4-202ENST00000319242 CDCA8Q53HL2 280 aa37.42■■■■□ 3.58
GFRA4-202ENST00000319242 EDC4Q6P2E9 1401 aaKnown RBP37.39■■■■□ 3.58
GFRA4-202ENST00000319242 EIF4G2P78344 907 aaKnown RBP eCLIP37.38■■■■□ 3.57
GFRA4-202ENST00000319242 NME9Q86XW9 330 aa37.37■■■■□ 3.57
GFRA4-202ENST00000319242 ZRANB1Q9UGI0 708 aa37.37■■■■□ 3.57
GFRA4-202ENST00000319242 KCNH5Q8NCM2 988 aa37.36■■■■□ 3.57
GFRA4-202ENST00000319242 STRN4Q9NRL3 753 aa37.36■■■■□ 3.57
GFRA4-202ENST00000319242 USP31Q70CQ4 1352 aa37.35■■■■□ 3.57
GFRA4-202ENST00000319242 ZBTB7CA1YPR0 619 aa37.35■■■■□ 3.57
GFRA4-202ENST00000319242 SPATA31A5Q5VU36 1347 aa37.34■■■■□ 3.57
GFRA4-202ENST00000319242 SPATA31A7Q8IWB4 1347 aa37.34■■■■□ 3.57
GFRA4-202ENST00000319242 ONECUT3O60422 494 aaPredicted RBP37.33■■■■□ 3.57
GFRA4-202ENST00000319242 HSPA5P11021 654 aaKnown RBP37.33■■■■□ 3.57
GFRA4-202ENST00000319242 EVA1CP58658 441 aa37.33■■■■□ 3.57
GFRA4-202ENST00000319242 CAMTA1Q9Y6Y1 1673 aa37.33■■■■□ 3.57
GFRA4-202ENST00000319242 ANKRD36BQ8N2N9 1353 aa37.32■■■■□ 3.57
GFRA4-202ENST00000319242 SOX12O15370 315 aa37.32■■■■□ 3.56
GFRA4-202ENST00000319242 SEPT12Q8IYM1 358 aa37.31■■■■□ 3.56
GFRA4-202ENST00000319242 LMO7Q8WWI1 1683 aa37.31■■■■□ 3.56
GFRA4-202ENST00000319242 AATKQ6ZMQ8 1374 aa37.29■■■■□ 3.56
GFRA4-202ENST00000319242 FAM98CQ17RN3 349 aaKnown RBP37.28■■■■□ 3.56
GFRA4-202ENST00000319242 ARHGEF25Q86VW2 580 aa37.28■■■■□ 3.56
GFRA4-202ENST00000319242 SPATA31A1Q5TZJ5 1347 aa37.26■■■■□ 3.56
GFRA4-202ENST00000319242 LARP1Q6PKG0 1096 aaKnown RBP37.24■■■■□ 3.55
GFRA4-202ENST00000319242 A0A0G2JS52 829 aa37.23■■■■□ 3.55
GFRA4-202ENST00000319242 NFAT5O94916 1531 aa37.23■■■■□ 3.55
GFRA4-202ENST00000319242 MYT1Q01538 1121 aa37.23■■■■□ 3.55
GFRA4-202ENST00000319242 USP54Q70EL1 1684 aa37.23■■■■□ 3.55
GFRA4-202ENST00000319242 COL5A2P05997 1499 aaPredicted RBP37.21■■■■□ 3.55
GFRA4-202ENST00000319242 USP35Q9P2H5 1018 aa37.2■■■■□ 3.55
GFRA4-202ENST00000319242 AXIN2Q9Y2T1 843 aa37.2■■■■□ 3.55
GFRA4-202ENST00000319242 OVOS2A0A0J9YW53 1432 aa37.19■■■■□ 3.54
GFRA4-202ENST00000319242 OVOS2Q6IE36 1432 aa37.19■■■■□ 3.54
GFRA4-202ENST00000319242 COL18A1P39060 1754 aa37.19■■■■□ 3.54
GFRA4-202ENST00000319242 POLR3GLQ9BT43 218 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms