RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 BLMP54132 1417 aaPredicted RBP29.14■■■□□ 2.26
SERF1A-201ENST00000317633 ATP7BP35670 1465 aa29.14■■■□□ 2.26
SERF1A-201ENST00000317633 BTG4Q9NY30 223 aa29.13■■■□□ 2.25
SERF1A-201ENST00000317633 NRAPQ86VF7 1730 aa29.12■■■□□ 2.25
SERF1A-201ENST00000317633 CDK19Q9BWU1 502 aa29.12■■■□□ 2.25
SERF1A-201ENST00000317633 SF3B2Q13435 895 aaKnown RBP29.1■■■□□ 2.25
SERF1A-201ENST00000317633 KRT27Q7Z3Y8 459 aa29.1■■■□□ 2.25
SERF1A-201ENST00000317633 CRYBG1Q9Y4K1 1723 aa29.1■■■□□ 2.25
SERF1A-201ENST00000317633 A0A0G2JS52 829 aa29.08■■■□□ 2.25
SERF1A-201ENST00000317633 MYT1Q01538 1121 aa29.08■■■□□ 2.25
SERF1A-201ENST00000317633 CCDC61Q9Y6R9 512 aa29.07■■■□□ 2.24
SERF1A-201ENST00000317633 PRDM11Q9NQV5 511 aa29.06■■■□□ 2.24
SERF1A-201ENST00000317633 TOPAZ1Q8N9V7 1692 aa29.05■■■□□ 2.24
SERF1A-201ENST00000317633 POLR3AO14802 1390 aaPredicted RBP29.03■■■□□ 2.24
SERF1A-201ENST00000317633 FAM98CQ17RN3 349 aaKnown RBP29.03■■■□□ 2.24
SERF1A-201ENST00000317633 NBPF1Q3BBV0 1214 aa29.03■■■□□ 2.24
SERF1A-201ENST00000317633 ACEP12821 1306 aa29.01■■■□□ 2.23
SERF1A-201ENST00000317633 PLEKHG3A1L390 1219 aa29.01■■■□□ 2.23
SERF1A-201ENST00000317633 NBPF8Q3BBV2 869 aa29.01■■■□□ 2.23
SERF1A-201ENST00000317633 PHRF1Q9P1Y6 1649 aaKnown RBP29■■■□□ 2.23
SERF1A-201ENST00000317633 SPATA31A5Q5VU36 1347 aa28.99■■■□□ 2.23
SERF1A-201ENST00000317633 SPATA31A7Q8IWB4 1347 aa28.99■■■□□ 2.23
SERF1A-201ENST00000317633 CENPJQ9HC77 1338 aaPredicted RBP28.98■■■□□ 2.23
SERF1A-201ENST00000317633 DEFB132Q7Z7B7 95 aa28.98■■■□□ 2.23
SERF1A-201ENST00000317633 KIAA0232Q92628 1395 aa28.98■■■□□ 2.23
SERF1A-201ENST00000317633 SRPK2P78362 688 aaKnown RBP28.97■■■□□ 2.23
SERF1A-201ENST00000317633 NUTM2GQ5VZR2 741 aa28.95■■■□□ 2.22
SERF1A-201ENST00000317633 ABTB2Q8N961 1025 aa28.94■■■□□ 2.22
SERF1A-201ENST00000317633 ZC3H6P61129 1189 aaKnown RBP28.93■■■□□ 2.22
SERF1A-201ENST00000317633 QRICH2Q9H0J4 1663 aa28.93■■■□□ 2.22
SERF1A-201ENST00000317633 BAG6P46379 1132 aa28.92■■■□□ 2.22
SERF1A-201ENST00000317633 CHRNA2Q15822 529 aa28.92■■■□□ 2.22
SERF1A-201ENST00000317633 PPIP5K1Q6PFW1 1433 aa28.92■■■□□ 2.22
SERF1A-201ENST00000317633 THSD7AQ9UPZ6 1657 aa28.91■■■□□ 2.22
SERF1A-201ENST00000317633 L3MBTL2Q969R5 705 aa28.91■■■□□ 2.22
SERF1A-201ENST00000317633 STRN4Q9NRL3 753 aa28.91■■■□□ 2.22
SERF1A-201ENST00000317633 SPATA31A1Q5TZJ5 1347 aa28.9■■■□□ 2.22
SERF1A-201ENST00000317633 CABP2Q9NPB3 220 aa28.89■■■□□ 2.22
SERF1A-201ENST00000317633 RGPD1P0DJD0 1748 aa28.89■■■□□ 2.21
SERF1A-201ENST00000317633 BRD4O60885 1362 aaPredicted RBP28.88■■■□□ 2.21
SERF1A-201ENST00000317633 EVA1CP58658 441 aa28.88■■■□□ 2.21
SERF1A-201ENST00000317633 NLRP13Q86W25 1043 aa28.88■■■□□ 2.21
SERF1A-201ENST00000317633 NRKQ7Z2Y5 1582 aa28.88■■■□□ 2.21
SERF1A-201ENST00000317633 USP19O94966 1318 aa28.85■■■□□ 2.21
SERF1A-201ENST00000317633 CPDO75976 1380 aa28.85■■■□□ 2.21
SERF1A-201ENST00000317633 TRPM1Q7Z4N2 1603 aa28.83■■■□□ 2.21
SERF1A-201ENST00000317633 FAM182BQ5T319 152 aa28.82■■■□□ 2.2
SERF1A-201ENST00000317633 SIN3AQ96ST3 1273 aa28.82■■■□□ 2.2
SERF1A-201ENST00000317633 SSH2Q76I76 1423 aa28.82■■■□□ 2.2
SERF1A-201ENST00000317633 EVC2Q86UK5 1308 aa28.81■■■□□ 2.2
SERF1A-201ENST00000317633 CABP1Q9NZU7 370 aa28.81■■■□□ 2.2
SERF1A-201ENST00000317633 USP35Q9P2H5 1018 aa28.81■■■□□ 2.2
SERF1A-201ENST00000317633 GCP02774 474 aa28.8■■■□□ 2.2
SERF1A-201ENST00000317633 SRCAPQ6ZRS2 3230 aa28.8■■■□□ 2.2
SERF1A-201ENST00000317633 CAMTA1Q9Y6Y1 1673 aa28.8■■■□□ 2.2
SERF1A-201ENST00000317633 NEUROD1Q13562 356 aa28.79■■■□□ 2.2
SERF1A-201ENST00000317633 FAM196AQ6ZSG2 479 aa28.79■■■□□ 2.2
SERF1A-201ENST00000317633 BARGINQ6ZT62 677 aa28.79■■■□□ 2.2
SERF1A-201ENST00000317633 LMO7Q8WWI1 1683 aa28.79■■■□□ 2.2
SERF1A-201ENST00000317633 USP6P35125 1406 aa28.78■■■□□ 2.2
SERF1A-201ENST00000317633 ROCK2O75116 1388 aaKnown RBP28.77■■■□□ 2.2
SERF1A-201ENST00000317633 EN1Q05925 392 aaPredicted RBP28.77■■■□□ 2.2
SERF1A-201ENST00000317633 TNS1Q9HBL0 1735 aaKnown RBP28.75■■■□□ 2.19
SERF1A-201ENST00000317633 NLRP6P59044 892 aa28.75■■■□□ 2.19
SERF1A-201ENST00000317633 PDE3BQ13370 1112 aa28.75■■■□□ 2.19
SERF1A-201ENST00000317633 LARP1Q6PKG0 1096 aaKnown RBP28.75■■■□□ 2.19
SERF1A-201ENST00000317633 TCP11L2Q8N4U5 519 aa28.75■■■□□ 2.19
SERF1A-201ENST00000317633 THRAP3Q9Y2W1 955 aaKnown RBP28.74■■■□□ 2.19
SERF1A-201ENST00000317633 DISP2A7MBM2 1401 aa28.74■■■□□ 2.19
SERF1A-201ENST00000317633 ZNF692Q9BU19 519 aaPredicted RBP28.71■■■□□ 2.19
SERF1A-201ENST00000317633 TRIM37O94972 964 aa28.7■■■□□ 2.18
SERF1A-201ENST00000317633 COL5A2P05997 1499 aaPredicted RBP28.7■■■□□ 2.18
SERF1A-201ENST00000317633 SLIT3O75094 1523 aa28.69■■■□□ 2.18
SERF1A-201ENST00000317633 LRP5O75197 1615 aa28.69■■■□□ 2.18
SERF1A-201ENST00000317633 ZBTB7CA1YPR0 619 aa28.69■■■□□ 2.18
SERF1A-201ENST00000317633 PSDA5PKW4 1024 aaPredicted RBP28.69■■■□□ 2.18
SERF1A-201ENST00000317633 AATKQ6ZMQ8 1374 aa28.67■■■□□ 2.18
SERF1A-201ENST00000317633 CRB1P82279 1406 aa28.67■■■□□ 2.18
SERF1A-201ENST00000317633 PIK3C2AO00443 1686 aa28.67■■■□□ 2.18
SERF1A-201ENST00000317633 AKAP12Q02952 1782 aa28.66■■■□□ 2.18
SERF1A-201ENST00000317633 APBA3O96018 575 aa28.65■■■□□ 2.18
SERF1A-201ENST00000317633 EZH2Q15910 746 aaKnown RBP28.65■■■□□ 2.18
SERF1A-201ENST00000317633 PARP4Q9UKK3 1724 aaKnown RBP28.65■■■□□ 2.18
SERF1A-201ENST00000317633 PARD3Q8TEW0 1356 aa28.64■■■□□ 2.18
SERF1A-201ENST00000317633 C11orf95C9JLR9 678 aaPredicted RBP28.64■■■□□ 2.18
SERF1A-201ENST00000317633 KCNH5Q8NCM2 988 aa28.63■■■□□ 2.17
SERF1A-201ENST00000317633 CAMKK2Q96RR4 588 aa28.63■■■□□ 2.17
SERF1A-201ENST00000317633 TTC21BQ7Z4L5 1316 aa28.63■■■□□ 2.17
SERF1A-201ENST00000317633 TTC21AQ8NDW8 1320 aa28.62■■■□□ 2.17
SERF1A-201ENST00000317633 R3HDM1Q15032 1099 aaKnown RBP28.6■■■□□ 2.17
SERF1A-201ENST00000317633 COL18A1P39060 1754 aa28.6■■■□□ 2.17
SERF1A-201ENST00000317633 TOM1L2Q6ZVM7 507 aa28.59■■■□□ 2.17
SERF1A-201ENST00000317633 SBNO2Q9Y2G9 1366 aa28.59■■■□□ 2.17
SERF1A-201ENST00000317633 KTN1Q86UP2 1357 aaKnown RBP28.58■■■□□ 2.17
SERF1A-201ENST00000317633 CPSF1Q10570 1443 aaKnown RBP28.58■■■□□ 2.17
SERF1A-201ENST00000317633 CARD11Q9BXL7 1154 aa28.57■■■□□ 2.16
SERF1A-201ENST00000317633 ARHGEF25Q86VW2 580 aa28.56■■■□□ 2.16
SERF1A-201ENST00000317633 WDR17Q8IZU2 1322 aa28.55■■■□□ 2.16
SERF1A-201ENST00000317633 DDB1Q16531 1140 aa28.54■■■□□ 2.16
SERF1A-201ENST00000317633 MON2Q7Z3U7 1717 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms