RNA–Protein interactions for RNA: ENST00000316786.1

C9orf106-201, Transcript of chromosome 9 open reading frame 106 (putative), humanhuman

TSL 1 (best) BASIC

Gene C9orf106, Length 3,145 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf106-201ENST00000316786 PDE3BQ13370 1112 aa17.4■□□□□ 0.38
C9orf106-201ENST00000316786 PRR36Q9H6K5 1346 aa17.39■□□□□ 0.37
C9orf106-201ENST00000316786 SIRT1Q96EB6 747 aa17.39■□□□□ 0.37
C9orf106-201ENST00000316786 CCDC61Q9Y6R9 512 aa17.38■□□□□ 0.37
C9orf106-201ENST00000316786 CEP170BQ9Y4F5 1589 aaPredicted RBP17.38■□□□□ 0.37
C9orf106-201ENST00000316786 SHPRHQ149N8 1683 aa17.37■□□□□ 0.37
C9orf106-201ENST00000316786 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.37■□□□□ 0.37
C9orf106-201ENST00000316786 TBX22Q9Y458 520 aa17.37■□□□□ 0.37
C9orf106-201ENST00000316786 NEUROD2Q15784 382 aa17.36■□□□□ 0.37
C9orf106-201ENST00000316786 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
C9orf106-201ENST00000316786 RCAN3Q9UKA8 241 aa17.36■□□□□ 0.37
C9orf106-201ENST00000316786 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
C9orf106-201ENST00000316786 AAMPQ13685 434 aa17.36■□□□□ 0.37
C9orf106-201ENST00000316786 ATP7BP35670 1465 aa17.36■□□□□ 0.37
C9orf106-201ENST00000316786 RRP7AQ9Y3A4 280 aaKnown RBP17.35■□□□□ 0.37
C9orf106-201ENST00000316786 NME9Q86XW9 330 aa17.35■□□□□ 0.37
C9orf106-201ENST00000316786 RNF123Q5XPI4 1314 aa17.35■□□□□ 0.37
C9orf106-201ENST00000316786 ZNF521Q96K83 1311 aa17.35■□□□□ 0.37
C9orf106-201ENST00000316786 PPM1GO15355 546 aaPredicted RBP17.34■□□□□ 0.37
C9orf106-201ENST00000316786 CPSF1Q10570 1443 aaKnown RBP17.34■□□□□ 0.37
C9orf106-201ENST00000316786 U2AF1L5P0DN76 240 aaPredicted RBP17.34■□□□□ 0.37
C9orf106-201ENST00000316786 U2AF1Q01081 240 aaKnown RBP eCLIP17.34■□□□□ 0.37
C9orf106-201ENST00000316786 SPINK5Q9NQ38 1064 aaPredicted RBP17.34■□□□□ 0.37
C9orf106-201ENST00000316786 ADAMTSL3P82987 1691 aa17.33■□□□□ 0.37
C9orf106-201ENST00000316786 B4GALNT3Q6L9W6 998 aa17.33■□□□□ 0.37
C9orf106-201ENST00000316786 DMRT2Q9Y5R5 561 aa17.33■□□□□ 0.37
C9orf106-201ENST00000316786 KCNA6P17658 529 aa17.33■□□□□ 0.36
C9orf106-201ENST00000316786 GOLGA2Q08379 1002 aa17.33■□□□□ 0.36
C9orf106-201ENST00000316786 U2SURPO15042 1029 aaKnown RBP17.32■□□□□ 0.36
C9orf106-201ENST00000316786 RBM33Q96EV2 1170 aaKnown RBP17.32■□□□□ 0.36
C9orf106-201ENST00000316786 KIF20BQ96Q89 1820 aa17.31■□□□□ 0.36
C9orf106-201ENST00000316786 DUSP27Q5VZP5 1158 aa17.31■□□□□ 0.36
C9orf106-201ENST00000316786 PPP4R2Q9NY27 417 aa17.31■□□□□ 0.36
C9orf106-201ENST00000316786 ANKRD26Q9UPS8 1709 aa17.31■□□□□ 0.36
C9orf106-201ENST00000316786 RRP1P56182 461 aaKnown RBP17.3■□□□□ 0.36
C9orf106-201ENST00000316786 PLIN1O60240 522 aa17.3■□□□□ 0.36
C9orf106-201ENST00000316786 ANKLE2Q86XL3 938 aa17.3■□□□□ 0.36
C9orf106-201ENST00000316786 TCP11L2Q8N4U5 519 aa17.3■□□□□ 0.36
C9orf106-201ENST00000316786 EDC4Q6P2E9 1401 aaKnown RBP17.29■□□□□ 0.36
C9orf106-201ENST00000316786 PMFBP1Q8TBY8 1022 aa17.29■□□□□ 0.36
C9orf106-201ENST00000316786 RUNDC1Q96C34 613 aa17.29■□□□□ 0.36
C9orf106-201ENST00000316786 CDC42BPGQ6DT37 1551 aa17.29■□□□□ 0.36
C9orf106-201ENST00000316786 ACEP12821 1306 aa17.29■□□□□ 0.36
C9orf106-201ENST00000316786 NOP58Q9Y2X3 529 aaKnown RBP17.28■□□□□ 0.36
C9orf106-201ENST00000316786 SLFN5Q08AF3 891 aa17.27■□□□□ 0.36
C9orf106-201ENST00000316786 POLKQ9UBT6 870 aa17.27■□□□□ 0.36
C9orf106-201ENST00000316786 EMILIN1Q9Y6C2 1016 aa17.27■□□□□ 0.36
C9orf106-201ENST00000316786 WWC1Q8IX03 1113 aa17.27■□□□□ 0.35
C9orf106-201ENST00000316786 SETD1BQ9UPS6 1966 aaKnown RBP17.27■□□□□ 0.35
C9orf106-201ENST00000316786 ADGRB2O60241 1585 aa17.26■□□□□ 0.35
C9orf106-201ENST00000316786 NKTRP30414 1462 aaKnown RBP17.26■□□□□ 0.35
C9orf106-201ENST00000316786 PTCH1Q13635 1447 aa17.26■□□□□ 0.35
C9orf106-201ENST00000316786 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
C9orf106-201ENST00000316786 RRS1Q15050 365 aaKnown RBP17.25■□□□□ 0.35
C9orf106-201ENST00000316786 ZNF692Q9BU19 519 aaPredicted RBP17.25■□□□□ 0.35
C9orf106-201ENST00000316786 DIP2AQ14689 1571 aa17.24■□□□□ 0.35
C9orf106-201ENST00000316786 MON2Q7Z3U7 1717 aa17.24■□□□□ 0.35
C9orf106-201ENST00000316786 MAP2P11137 1827 aaKnown RBP17.24■□□□□ 0.35
C9orf106-201ENST00000316786 DIAPH1O60610 1272 aaKnown RBP17.24■□□□□ 0.35
C9orf106-201ENST00000316786 COG3Q96JB2 828 aa17.24■□□□□ 0.35
C9orf106-201ENST00000316786 RSPH6AQ9H0K4 717 aa17.24■□□□□ 0.35
C9orf106-201ENST00000316786 ITSN1Q15811 1721 aa17.24■□□□□ 0.35
C9orf106-201ENST00000316786 XRN1Q8IZH2 1706 aaKnown RBP17.23■□□□□ 0.35
C9orf106-201ENST00000316786 AKAP12Q02952 1782 aa17.23■□□□□ 0.35
C9orf106-201ENST00000316786 RGPD8O14715 1765 aaPredicted RBP17.23■□□□□ 0.35
C9orf106-201ENST00000316786 SOX12O15370 315 aa17.23■□□□□ 0.35
C9orf106-201ENST00000316786 PLEKHG3A1L390 1219 aa17.22■□□□□ 0.35
C9orf106-201ENST00000316786 EXOC6Q8TAG9 804 aa17.22■□□□□ 0.35
C9orf106-201ENST00000316786 IQSEC2Q5JU85 1478 aa17.22■□□□□ 0.35
C9orf106-201ENST00000316786 ZNF142P52746 1687 aaPredicted RBP17.22■□□□□ 0.35
C9orf106-201ENST00000316786 TTC21BQ7Z4L5 1316 aa17.22■□□□□ 0.35
C9orf106-201ENST00000316786 PNPLA6Q8IY17 1366 aa17.22■□□□□ 0.35
C9orf106-201ENST00000316786 TRMT2AQ8IZ69 625 aaKnown RBP17.22■□□□□ 0.35
C9orf106-201ENST00000316786 PAK3O75914 559 aaPredicted RBP17.21■□□□□ 0.35
C9orf106-201ENST00000316786 TOPAZ1Q8N9V7 1692 aa17.21■□□□□ 0.34
C9orf106-201ENST00000316786 E9PSI1 815 aa17.21■□□□□ 0.34
C9orf106-201ENST00000316786 BRPF3Q9ULD4 1205 aa17.21■□□□□ 0.34
C9orf106-201ENST00000316786 NGDNQ8NEJ9 315 aaKnown RBP17.2■□□□□ 0.34
C9orf106-201ENST00000316786 PLEKHF1Q96S99 279 aa17.2■□□□□ 0.34
C9orf106-201ENST00000316786 USP6P35125 1406 aa17.19■□□□□ 0.34
C9orf106-201ENST00000316786 HMOX1P09601 288 aa17.19■□□□□ 0.34
C9orf106-201ENST00000316786 C20orf194Q5TEA3 1177 aa17.19■□□□□ 0.34
C9orf106-201ENST00000316786 PIK3R4Q99570 1358 aa17.18■□□□□ 0.34
C9orf106-201ENST00000316786 NGEFQ8N5V2 710 aa17.18■□□□□ 0.34
C9orf106-201ENST00000316786 PHF23Q9BUL5 403 aaPredicted RBP17.17■□□□□ 0.34
C9orf106-201ENST00000316786 MAPK8IP3Q9UPT6 1336 aa17.17■□□□□ 0.34
C9orf106-201ENST00000316786 CHD2O14647 1828 aaKnown RBP17.16■□□□□ 0.34
C9orf106-201ENST00000316786 BCAR3O75815 825 aa17.16■□□□□ 0.34
C9orf106-201ENST00000316786 TMPOP42166 694 aaKnown RBP17.16■□□□□ 0.34
C9orf106-201ENST00000316786 NRKQ7Z2Y5 1582 aa17.16■□□□□ 0.34
C9orf106-201ENST00000316786 NPHP4O75161 1426 aaPredicted RBP17.15■□□□□ 0.34
C9orf106-201ENST00000316786 PRKAR2BP31323 418 aa17.15■□□□□ 0.34
C9orf106-201ENST00000316786 AATKQ6ZMQ8 1374 aa17.14■□□□□ 0.33
C9orf106-201ENST00000316786 NUTM2GQ5VZR2 741 aa17.14■□□□□ 0.33
C9orf106-201ENST00000316786 CRBNQ96SW2 442 aa17.14■□□□□ 0.33
C9orf106-201ENST00000316786 IL13P35225 146 aa17.13■□□□□ 0.33
C9orf106-201ENST00000316786 C14orf37Q86TY3 774 aa17.13■□□□□ 0.33
C9orf106-201ENST00000316786 TRIM35Q9UPQ4 493 aa17.13■□□□□ 0.33
C9orf106-201ENST00000316786 OVOS2A0A0J9YW53 1432 aa17.12■□□□□ 0.33
C9orf106-201ENST00000316786 OVOS2Q6IE36 1432 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms